Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p007593 Quercus lobata HOM05D008469 ORTHO05D010507 2.1e-76 288.9 138 100.0
QL03p007596 Quercus lobata HOM05D008469 ORTHO05D010507 7.4e-50 200.7 92 100.0
CiPaw.07G019400 Carya illinoinensis HOM05D008469 ORTHO05D010507 7.2e-29 131.0 92 67.4
TWI12G0878 Tripterygium wilfordii HOM05D008469 ORTHO05D010507 4.9e-25 118.2 102 54.9
Haze_04171 Corylus avellana HOM05D008469 ORTHO05D010507 7.3e-21 104.4 78 66.7
Potri.005G027500 Populus trichocarpa HOM05D008469 ORTHO05D010507 9.5e-21 104.0 106 57.5
Prupe.6G323500 Prunus persica HOM05D008469 ORTHO05D010507 4.0e-19 98.6 94 55.3
CiPaw.11G067900 Carya illinoinensis HOM05D008469 ORTHO05D010507 1.2e-18 97.1 92 54.3
Dinv40304 Davidia involucrata HOM05D008469 ORTHO05D010507 1.2e-18 97.1 100 52.0
Thecc.05G310200 Theobroma cacao HOM05D008469 ORTHO05D010507 9.2e-16 87.4 88 47.7
Eucgr.H04501 Eucalyptus grandis HOM05D008469 ORTHO05D010507 2.0e-15 86.3 83 48.2
Manes.08G119900 Manihot esculenta HOM05D008469 ORTHO05D010507 2.7e-15 85.9 83 53.0
GSVIVG01031088001 Vitis vinifera HOM05D008469 ORTHO05D010507 6.0e-15 84.7 90 52.2
FAN05G3068 Fragaria x ananassa HOM05D008469 ORTHO05D010507 7.8e-15 84.3 102 48.0
FAN14G4354 Fragaria x ananassa HOM05D008469 ORTHO05D010507 7.8e-15 84.3 102 48.0
RcHm_v2.0_Chr3g0455231 Rosa chinensis HOM05D008469 ORTHO05D010507 7.8e-15 84.3 98 46.9
Duzib106G0503 Durio zibethinus HOM05D008469 ORTHO05D010507 1.3e-14 83.6 90 48.9
FAN02G3015 Fragaria x ananassa HOM05D008469 ORTHO05D010507 1.3e-14 83.6 94 51.1
FvH4_6g06210 Fragaria vesca HOM05D008469 ORTHO05D010507 1.7e-14 83.2 102 48.0
Glyma.20G234700 Glycine max HOM05D008469 ORTHO05D010507 3.9e-14 82.0 83 49.4
Hma1.2p1_1334F.1_g276310 Hydrangea macrophylla HOM05D008469 ORTHO05D010507 3.9e-14 82.0 101 45.5
Lj5g0019669 Lotus japonicus HOM05D008469 ORTHO05D010507 2.5e-13 79.3 80 47.5
FAN09G0741 Fragaria x ananassa HOM05D008469 ORTHO05D010507 3.3e-13 79.0 94 50.0
Gohir.A11G266000 Gossypium hirsutum HOM05D008469 ORTHO05D010507 4.3e-13 78.6 88 50.0
arahy.Tifrunner.gnm1.ann1.F0AI1K Arachis hypogaea HOM05D008469 ORTHO05D010507 9.5e-13 77.4 113 38.9
Gohir.D11G276300 Gossypium hirsutum HOM05D008469 ORTHO05D010507 1.2e-12 77.0 87 50.6
Gorai.007G298400 Gossypium raimondii HOM05D008469 ORTHO05D010507 1.6e-12 76.6 88 50.0
MD12G1217200 Malus domestica HOM05D008469 ORTHO05D010507 2.8e-12 75.9 66 56.1
Actinidia05687 Actinidia chinensis HOM05D008469 ORTHO05D010507 6.8e-11 71.2 98 39.8
Psat6g150680 Pisum sativum HOM05D008469 ORTHO05D010507 6.8e-11 71.2 110 38.2
vmacro04974 Vaccinium macrocarpon HOM05D008469 ORTHO05D010507 1.2e-10 70.5 102 41.2
ClCG02G015580 Citrullus lanatus HOM05D008469 ORTHO05D010507 1.5e-10 70.1 103 40.8
Lalb_Chr21g0310671 Lupinus albus HOM05D008469 ORTHO05D010507 2.0e-10 69.7 72 45.8
Rhsim07G0185700 Rhododendron simsii HOM05D008469 ORTHO05D010507 2.0e-10 69.7 108 40.7
Sed0012792 Sechium edule HOM05D008469 ORTHO05D010507 3.4e-10 68.9 81 46.9
arahy.Tifrunner.gnm1.ann1.G7FS3C Arachis hypogaea HOM05D008469 ORTHO05D010507 7.5e-10 67.8 78 47.4
Nn3g21392 Nelumbo nucifera HOM05D008469 ORTHO05D010507 2.9e-09 65.9 99 37.4
CsaV3_2G006510 Cucumis sativus L. HOM05D008469 ORTHO05D010507 6.4e-09 64.7 103 38.8
TAR365G0772 Trochodendron aralioides HOM05D008469 ORTHO05D010507 6.4e-09 64.7 107 33.6
TPR.G6083 Trifolium pratense HOM05D008469 ORTHO05D010507 8.3e-09 64.3 88 40.9
DCAR_029399 Daucus carota HOM05D008469 ORTHO05D010507 2.4e-08 62.8 61 47.5
Cc02_g33250 Coffea canephora HOM05D008469 ORTHO05D010507 7.1e-08 61.2 97 39.2
THA.LOC104805885 Tarenaya hassleriana HOM05D008469 ORTHO05D010507 9.2e-08 60.8 85 38.8
SHI24578 Sapria himalayana HOM05D008469 ORTHO05D010507 4.6e-07 58.5 100 34.0
PGR031G2494 Punica granatum HOM05D008469 ORTHO05D010507 1.7e-06 56.6 29 69.0
Lsat_1_v5_gn_9_123060 Lactuca sativa HOM05D008469 ORTHO05D010507 3.9e-06 55.5 63 41.3


User provided reference genes

Program Settings