Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p007536 Quercus lobata HOM05D000125 ORTHO05D000120 3.6e-230 801.2 399 100.0
QL03p007619 Quercus lobata HOM05D000125 ORTHO05D000120 3.7e-49 199.9 112 85.7
QL05p055394 Quercus lobata HOM05D000125 ORTHO05D000120 3.3e-42 176.8 161 57.8
QL03p007579 Quercus lobata HOM05D000125 ORTHO05D000120 2.9e-38 163.7 112 73.2
QL03p007490 Quercus lobata HOM05D000125 ORTHO05D000120 1.4e-35 154.8 112 68.8
QL03p006698 Quercus lobata HOM05D000125 ORTHO05D000120 3.1e-32 143.7 247 41.7
QL03p017988 Quercus lobata HOM05D000125 ORTHO05D000120 1.6e-28 131.3 98 66.3
QL09p047056 Quercus lobata HOM05D000125 ORTHO05D000120 2.1e-28 131.0 142 50.7
QL03p006577 Quercus lobata HOM05D000125 ORTHO05D000120 6.1e-28 129.4 135 51.1
QL09p047064 Quercus lobata HOM05D000125 ORTHO05D000120 2.3e-27 127.5 115 59.1
QL12p030745 Quercus lobata HOM05D000125 ORTHO05D000120 3.0e-27 127.1 201 45.3
QL09p047154 Quercus lobata HOM05D000125 ORTHO05D000120 5.2e-27 126.3 110 58.2
QL09p047139 Quercus lobata HOM05D000125 ORTHO05D000120 6.7e-27 125.9 137 48.2
QL03p004456 Quercus lobata HOM05D000125 ORTHO05D000120 2.6e-26 124.0 126 54.8
QL05p012534 Quercus lobata HOM05D000125 ORTHO05D000120 2.6e-26 124.0 114 56.1
QL03p004389 Quercus lobata HOM05D000125 ORTHO05D000120 7.5e-26 122.5 126 53.2
QL05p015151 Quercus lobata HOM05D000125 ORTHO05D000120 2.8e-25 120.6 116 55.2
QL03p007034 Quercus lobata HOM05D000125 ORTHO05D000120 3.7e-25 120.2 122 50.8
QL03p006702 Quercus lobata HOM05D000125 ORTHO05D000120 1.8e-24 117.9 117 55.6
QL09p047279 Quercus lobata HOM05D000125 ORTHO05D000120 3.1e-24 117.1 137 45.3
QL03p074516 Quercus lobata HOM05D000125 ORTHO05D000120 1.6e-23 114.8 110 49.1
Haze_04218 Corylus avellana HOM05D000125 ORTHO05D000120 7.2e-21 105.9 152 42.1
QL09p001329 Quercus lobata HOM05D000125 ORTHO05D000120 6.1e-20 102.8 121 49.6
QL03p074351 Quercus lobata HOM05D000125 ORTHO05D000120 8.0e-20 102.4 114 52.6
QL03p004058 Quercus lobata HOM05D000125 ORTHO05D000120 4.0e-19 100.1 136 44.1
QL11p003228 Quercus lobata HOM05D000125 ORTHO05D000120 6.8e-19 99.4 111 50.5
QL03p074230 Quercus lobata HOM05D000677 ORTHO05D000727 2.0e-18 97.8 124 49.2
QL03p007957 Quercus lobata HOM05D000125 ORTHO05D000120 3.7e-17 93.6 127 42.5
QL11p014290 Quercus lobata HOM05D000125 ORTHO05D000120 3.7e-17 93.6 122 47.5
QL11p014934 Quercus lobata HOM05D000125 ORTHO05D000120 3.7e-17 93.6 122 47.5
QL03p006292 Quercus lobata HOM05D000125 ORTHO05D000120 1.8e-16 91.3 144 39.6
QL03p007125 Quercus lobata HOM05D000254 ORTHO05D000165 5.4e-16 89.7 122 40.2
QL03p007149 Quercus lobata HOM05D000125 ORTHO05D000120 1.6e-15 88.2 103 44.7
QL07p009736 Quercus lobata HOM05D000125 ORTHO05D000120 2.7e-15 87.4 159 38.4
QL03p007966 Quercus lobata HOM05D000125 ORTHO05D000807 4.5e-15 86.7 108 44.4
Haze_04188 Corylus avellana HOM05D000125 ORTHO05D000120 7.7e-15 85.9 151 35.1
QL03p005315 Quercus lobata HOM05D000125 ORTHO05D000120 1.7e-14 84.7 135 34.8
Haze_04189 Corylus avellana HOM05D000125 ORTHO05D000120 3.8e-14 83.6 141 34.8
Haze_04180 Corylus avellana HOM05D000125 ORTHO05D000120 5.0e-14 83.2 151 33.8
CiPaw.10G124000 Carya illinoinensis HOM05D000125 ORTHO05D000807 1.9e-13 81.3 95 43.2
CiPaw.07G018400 Carya illinoinensis HOM05D000125 ORTHO05D000120 3.2e-13 80.5 122 36.9
Potri.016G044432 Populus trichocarpa HOM05D000125 ORTHO05D000120 5.5e-13 79.7 107 36.4
CiPaw.08G162300 Carya illinoinensis HOM05D000125 ORTHO05D000120 2.7e-12 77.4 113 42.5
Potri.016G044800 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.7e-12 77.4 105 34.3
QL03p074328 Quercus lobata HOM05D000125 ORTHO05D000120 3.6e-12 77.0 109 47.7
Haze_04187 Corylus avellana HOM05D000125 ORTHO05D000120 4.7e-12 76.6 95 45.3
QL01p002329 Quercus lobata HOM05D000125 ORTHO05D000120 8.0e-12 75.9 94 42.6
CiPaw.08G162400 Carya illinoinensis HOM05D000125 ORTHO05D000120 1.4e-11 75.1 107 42.1
Potri.016G047200 Populus trichocarpa HOM05D000125 ORTHO05D000120 1.4e-11 75.1 107 34.6
QL03p006201 Quercus lobata HOM05D001619 ORTHO05D001541 1.4e-11 75.1 80 48.8
CiPaw.08G165900 Carya illinoinensis HOM05D000125 ORTHO05D000807 1.8e-11 74.7 113 41.6
Haze_19282 Corylus avellana HOM05D000125 ORTHO05D000120 1.8e-11 74.7 72 47.2
QL05p051439 Quercus lobata HOM05D000010 ORTHO05D338178 2.3e-11 74.3 50 72.0
Potri.016G044732 Populus trichocarpa HOM05D000125 ORTHO05D000120 5.2e-11 73.2 107 35.5
Potri.016G044600 Populus trichocarpa HOM05D000125 ORTHO05D000120 6.8e-11 72.8 107 35.5
Potri.016G047000 Populus trichocarpa HOM05D000125 ORTHO05D000120 1.2e-10 72.0 107 35.5
Potri.016G044200 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.6e-10 70.9 131 31.3
Potri.016G047300 Populus trichocarpa HOM05D000125 ORTHO05D000120 2.6e-10 70.9 107 34.6
Sabra16G0061100 Salix brachista HOM05D000125 ORTHO05D000120 2.6e-10 70.9 97 33.0
CiPaw.07G008600 Carya illinoinensis HOM05D000125 ORTHO05D000120 3.4e-10 70.5 78 44.9
DCAR_008299 Daucus carota HOM05D000125 ORTHO05D000120 3.4e-10 70.5 99 34.3
Potri.016G057800 Populus trichocarpa HOM05D000125 ORTHO05D000120 3.4e-10 70.5 71 40.8
Gohir.A09G225300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.5e-10 69.3 96 38.5
CiPaw.09G029900 Carya illinoinensis HOM05D000125 ORTHO05D000120 2.2e-09 67.8 76 40.8
Gorai.001G094700 Gossypium raimondii HOM05D000125 ORTHO05D000120 3.7e-09 67.0 102 38.2
CiPaw.16G080000 Carya illinoinensis HOM05D000125 ORTHO05D000120 4.9e-09 66.6 95 36.8
Haze_19311 Corylus avellana HOM05D000125 ORTHO05D000120 4.9e-09 66.6 72 43.1
Gohir.D09G227000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.9e-09 66.6 94 35.1
Gorai.006G248900 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.9e-09 66.6 94 35.1
Gohir.D07G088500 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.4e-08 65.1 102 37.3
AL3G22880 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 2.4e-08 64.3 107 36.4
CiPaw.05G114100 Carya illinoinensis HOM05D000125 ORTHO05D000120 4.1e-08 63.5 119 32.8
Gohir.D02G015750 Gossypium hirsutum HOM05D000125 ORTHO05D000120 4.1e-08 63.5 136 31.6
Gorai.005G018900 Gossypium raimondii HOM05D000125 ORTHO05D000120 4.1e-08 63.5 136 31.6
Thecc.05G183900 Theobroma cacao HOM05D000125 ORTHO05D000120 4.1e-08 63.5 75 41.3
QL10p019154 Quercus lobata HOM05D000125 ORTHO05D000120 5.4e-08 63.2 92 41.3
Thecc.05G184200 Theobroma cacao HOM05D000125 ORTHO05D000120 5.4e-08 63.2 75 41.3
CiPaw.08G119200 Carya illinoinensis HOM05D000125 ORTHO05D000120 7.0e-08 62.8 125 36.0
Gohir.D06G173300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.0e-08 62.8 106 33.0
Gorai.010G202500 Gossypium raimondii HOM05D000125 ORTHO05D000120 7.0e-08 62.8 106 33.0
Thecc.05G289300 Theobroma cacao HOM05D000125 ORTHO05D000120 9.2e-08 62.4 124 29.8
CiPaw.13G148100 Carya illinoinensis HOM05D000125 ORTHO05D000120 1.2e-07 62.0 69 44.9
COL.COLO4_08796 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.2e-07 62.0 105 33.3
Haze_19284 Corylus avellana HOM05D000125 ORTHO05D000120 1.2e-07 62.0 72 40.3
Gorai.011G248800 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.6e-07 61.6 109 30.3
Actinidia39190 Actinidia chinensis HOM05D000125 ORTHO05D000120 2.0e-07 61.2 138 31.9
COL.COLO4_29325 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.7e-07 60.8 75 40.0
AT3G11385 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.5e-07 60.1 102 35.3
AT3G11390 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 4.5e-07 60.1 107 33.6
TWI74G0807 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 5.9e-07 59.7 94 33.0
PGR004G0447 Punica granatum HOM05D000125 ORTHO05D000120 7.7e-07 59.3 100 33.0
Dinv18121 Davidia involucrata HOM05D000125 ORTHO05D000807 1.3e-06 58.5 123 30.9
Gohir.A10G209633 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.3e-06 58.5 71 35.2
MSTRG.19905 Avicennia marina HOM05D000125 ORTHO05D000120 1.7e-06 58.2 134 27.6
CiPaw.13G148300 Carya illinoinensis HOM05D000125 ORTHO05D000120 1.7e-06 58.2 93 33.3
COL.COLO4_32102 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.7e-06 58.2 86 36.0
Gohir.A02G006200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.7e-06 58.2 134 33.6
Gohir.A02G006400 Gossypium hirsutum HOM05D000125 ORTHO05D000120 1.7e-06 58.2 134 33.6
Thecc.05G165600 Theobroma cacao HOM05D000125 ORTHO05D000120 1.7e-06 58.2 88 34.1
COL.COLO4_16601 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.3e-06 57.8 85 38.8
COL.COLO4_29323 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.3e-06 57.8 70 38.6
DCAR_011390 Daucus carota HOM05D000125 ORTHO05D000120 2.3e-06 57.8 108 31.5
Gorai.011G244000 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.9e-06 57.4 97 30.9
COL.COLO4_14942 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.8e-06 57.0 101 30.7
Gohir.D02G015800 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.8e-06 57.0 143 30.1
QL03p012897 Quercus lobata HOM05D000125 ORTHO05D000120 3.8e-06 57.0 46 67.4
Thecc.10G051300 Theobroma cacao HOM05D000125 ORTHO05D000120 3.8e-06 57.0 91 29.7
BcaC01g02691 Brassica carinata HOM05D000125 ORTHO05D000120 5.0e-06 56.6 102 32.4
C03p61590 Brassica napus HOM05D000125 ORTHO05D000120 5.0e-06 56.6 102 32.4
Dinv18125 Davidia involucrata HOM05D000125 ORTHO05D000120 5.0e-06 56.6 96 32.3
BolC2t06287H Brassica oleracea HOM05D000125 ORTHO05D000120 6.6e-06 56.2 95 33.7
Gohir.A02G006600 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.6e-06 56.2 139 31.7
Gohir.A02G037200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.6e-06 56.2 80 36.2
Gohir.A10G209000 Gossypium hirsutum HOM05D000125 ORTHO05D000120 6.6e-06 56.2 68 39.7
PGR147G0007 Punica granatum HOM05D000125 ORTHO05D000120 6.6e-06 56.2 110 29.1
TWI39G0227 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 6.6e-06 56.2 117 29.9
TWI39G0556 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 6.6e-06 56.2 116 27.6
A06p31340 Brassica napus HOM05D000125 ORTHO05D000120 8.6e-06 55.8 102 32.4
BraA06t26076Z Brassica rapa HOM05D000125 ORTHO05D000120 8.6e-06 55.8 102 32.4
Duzib106G1937 Durio zibethinus HOM05D000125 ORTHO05D000120 8.6e-06 55.8 104 32.7
Thhalv10002351m.g Eutrema salsugineum HOM05D000125 ORTHO05D000120 8.6e-06 55.8 107 32.7
Gohir.A10G209500 Gossypium hirsutum HOM05D000125 ORTHO05D000120 8.6e-06 55.8 95 28.4
Gohir.A10G215640 Gossypium hirsutum HOM05D000125 ORTHO05D000120 8.6e-06 55.8 68 38.2


User provided reference genes

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