Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 1.5e-114 416.0 188 100.0
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 1.8e-91 339.3 152 100.0
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 6.3e-76 287.7 152 84.2
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 2.4e-67 259.2 156 73.7
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.1e-64 250.4 152 75.0
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 1.5e-64 250.0 151 70.9
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 1.9e-64 249.6 162 66.7
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 5.5e-64 248.1 154 70.1
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 5.5e-64 248.1 152 70.4
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 2.1e-63 246.1 154 69.5
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.6e-63 245.4 156 72.4
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 4.7e-63 245.0 156 71.8
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 8.0e-63 244.2 149 70.5
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 8.0e-63 244.2 166 68.1
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.4e-62 243.4 166 68.1
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.0e-62 242.3 166 67.5
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 4.0e-62 241.9 161 64.6
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 5.2e-62 241.5 155 68.4
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 6.8e-62 241.1 154 68.2
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 8.8e-62 240.7 151 69.5
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 2.6e-61 239.2 153 70.6
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 4.4e-61 238.4 151 70.9
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 7.5e-61 237.7 138 75.4
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 9.8e-61 237.3 156 66.0
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 1.3e-60 236.9 161 68.9
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 2.2e-60 236.1 146 71.2
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 6.3e-60 234.6 154 67.5
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 5.4e-59 231.5 152 66.4
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 2.0e-58 229.6 152 67.8
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 2.7e-58 229.2 177 59.3
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 2.7e-58 229.2 145 68.3
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 3.5e-58 228.8 164 61.0
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 7.8e-58 227.6 161 61.5
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 1.0e-57 227.3 152 64.5
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 1.3e-57 226.9 135 71.9
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 1.7e-57 226.5 150 62.7
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 1.7e-57 226.5 150 62.7
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 2.9e-57 225.7 154 64.3
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 2.9e-57 225.7 150 64.0
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 2.5e-56 222.6 147 66.7
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 3.3e-56 222.2 152 64.5
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 7.3e-56 221.1 152 63.2
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 1.2e-55 220.3 150 62.0
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 2.1e-55 219.5 165 58.8
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 3.6e-55 218.8 141 63.8
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 4.7e-55 218.4 154 64.9
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 4.0e-54 215.3 138 65.9
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 5.2e-54 214.9 136 67.6
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 5.2e-54 214.9 174 56.3
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 8.9e-54 214.2 152 59.9
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 5.7e-53 211.5 152 61.2
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 7.5e-53 211.1 156 62.8
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 1.7e-52 209.9 162 55.6
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 1.7e-52 209.9 146 61.0
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 2.9e-52 209.1 162 59.9
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 3.7e-52 208.8 145 63.4
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 8.3e-52 207.6 142 64.1
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 8.3e-52 207.6 160 56.2
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 1.4e-51 206.8 151 60.9
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 1.8e-51 206.5 149 61.1
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 3.2e-51 205.7 145 62.1
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 4.1e-51 205.3 145 61.4
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 4.1e-51 205.3 140 64.3
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 7.0e-51 204.5 149 57.7
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 1.2e-50 203.8 172 57.0
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 1.6e-50 203.4 141 61.0
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 1.6e-50 203.4 140 63.6
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 2.0e-50 203.0 145 61.4
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 3.5e-50 202.2 117 76.9
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.3e-49 200.3 134 68.7
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 2.3e-49 199.5 136 61.8
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 3.0e-49 199.1 135 60.0
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 3.9e-49 198.7 148 60.1
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 8.6e-49 197.6 148 59.5
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 8.6e-49 197.6 166 55.4
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 8.6e-49 197.6 165 53.3
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 1.1e-48 197.2 145 60.7
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 3.3e-48 195.7 146 59.6
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 9.5e-48 194.1 160 55.6
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 4.7e-47 191.8 143 58.0
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 8.0e-47 191.0 155 53.5
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 4.0e-46 188.7 137 58.4
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 4.0e-46 188.7 145 59.3
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 4.0e-46 188.7 146 56.8
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 4.4e-45 185.3 114 70.2
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 2.2e-44 183.0 153 53.6
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 1.4e-43 180.3 153 52.9
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 9.2e-43 177.6 114 64.9
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 1.2e-42 177.2 140 55.7
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 1.2e-42 177.2 124 62.1
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 2.0e-42 176.4 113 68.1
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 6.0e-42 174.9 114 65.8
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.3e-41 173.7 114 65.8
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 8.6e-41 171.0 124 59.7
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 2.5e-40 169.5 124 60.5
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 9.5e-40 167.5 164 48.2
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 1.5e-37 160.2 156 45.5
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 2.0e-37 159.8 119 59.7
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 3.7e-36 155.6 116 62.1
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 4.1e-35 152.1 184 43.5
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 1.2e-34 150.6 94 69.1
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 1.6e-34 150.2 132 50.8
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 3.3e-32 142.5 156 44.9
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 6.6e-25 118.2 84 57.1
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 2.8e-23 112.8 84 57.1
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 4.7e-23 112.1 114 42.1
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 9.0e-22 107.8 146 37.7
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 3.8e-20 102.4 161 35.4
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 7.1e-19 98.2 180 32.8
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 2.1e-18 96.7 135 40.7
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 3.3e-16 89.4 155 31.0
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 6.2e-15 85.1 55 67.3
Cre03.g200651 Chlamydomonas reinhardtii HOM05D006625 ORTHO05D008060 1.6e-07 60.5 73 38.4
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 2.8e-07 59.7 38 71.1


User provided reference genes

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