Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p005801 Quercus lobata HOM05D001020 ORTHO05D050614 2.6e-58 228.4 107 100.0
QL05p030563 Quercus lobata HOM05D001020 ORTHO05D050614 1.2e-47 193.0 107 86.0
QL06p001797 Quercus lobata HOM05D001020 ORTHO05D001137 3.4e-10 68.6 55 61.8
vmacro15434 Vaccinium macrocarpon HOM05D001020 ORTHO05D001137 7.6e-10 67.4 65 52.3
Dinv14813 Davidia involucrata HOM05D001020 ORTHO05D001137 1.0e-09 67.0 55 58.2
PGSC0003DMG400043938 Solanum tuberosum HOM05D001020 ORTHO05D001137 1.7e-09 66.2 64 50.0
Nitab4.5_0004343g0020 Nicotiana tabacum HOM05D001020 ORTHO05D001137 8.4e-09 63.9 64 46.9
Cc03_g05420 Coffea canephora HOM05D001020 ORTHO05D001137 1.4e-08 63.2 55 54.5
Peaxi162Scf00128g01112 Petunia axillaris HOM05D001020 ORTHO05D001137 1.9e-08 62.8 64 48.4
QL01p039054 Quercus lobata HOM05D001020 ORTHO05D001137 1.9e-08 62.8 57 52.6
QL06p050748 Quercus lobata HOM05D001020 ORTHO05D001137 1.9e-08 62.8 57 52.6
vmacro15436 Vaccinium macrocarpon HOM05D001020 ORTHO05D001137 3.2e-08 62.0 65 49.2
CAN.G135.56 Capsicum annuum HOM05D001020 ORTHO05D001137 4.2e-08 61.6 65 46.2
Peaxi162Scf00024g03215 Petunia axillaris HOM05D001020 ORTHO05D001137 4.2e-08 61.6 60 51.7
Rhsim02G0036400 Rhododendron simsii HOM05D001020 ORTHO05D001137 4.2e-08 61.6 65 47.7
PGSC0003DMG400017230 Solanum tuberosum HOM05D001020 ORTHO05D001137 4.2e-08 61.6 62 50.0
CAN.G793.41 Capsicum annuum HOM05D001020 ORTHO05D001137 5.5e-08 61.2 37 73.0
Peaxi162Scf00928g00010 Petunia axillaris HOM05D001020 ORTHO05D001137 5.5e-08 61.2 64 46.9
CSS0039921 Camellia sinensis var. sinensis HOM05D001020 ORTHO05D001137 7.1e-08 60.8 65 47.7
Haze_04908 Corylus avellana HOM05D001020 ORTHO05D001137 7.1e-08 60.8 51 56.9
Solyc09g089940.1 Solanum lycopersicum HOM05D001020 ORTHO05D001137 7.1e-08 60.8 62 50.0
Sopen09g032870 Solanum pennellii HOM05D001020 ORTHO05D001137 7.1e-08 60.8 62 50.0
Haze_11359 Corylus avellana HOM05D001020 ORTHO05D001137 9.3e-08 60.5 60 51.7
Peaxi162Scf00024g00311 Petunia axillaris HOM05D001020 ORTHO05D001137 9.3e-08 60.5 61 49.2
Dinv24155 Davidia involucrata HOM05D001020 ORTHO05D001137 1.2e-07 60.1 44 61.4
Nitab4.5_0000044g0110 Nicotiana tabacum HOM05D001020 ORTHO05D001137 1.2e-07 60.1 64 45.3
vmacro13889 Vaccinium macrocarpon HOM05D001020 ORTHO05D001137 1.2e-07 60.1 44 63.6
EL10Ac3g05021 Beta vulgaris HOM05D001020 ORTHO05D001137 1.6e-07 59.7 64 48.4
Cfa022561 Carpinus fangiana HOM05D001020 ORTHO05D001137 1.6e-07 59.7 60 50.0
CiPaw.02G113300 Carya illinoinensis HOM05D001020 ORTHO05D001137 2.1e-07 59.3 55 52.7
COL.COLO4_23626 Corchorus olitorius HOM05D001020 ORTHO05D001137 2.1e-07 59.3 44 59.1
DCAR_030719 Daucus carota HOM05D001020 ORTHO05D001137 2.1e-07 59.3 68 47.1
Nitab4.5_0003408g0070 Nicotiana tabacum HOM05D001020 ORTHO05D001137 2.1e-07 59.3 64 46.9
PSO832G3618 Papaver somniferum HOM05D001020 ORTHO05D001137 2.7e-07 58.9 54 50.0
Rhsim02G0036800 Rhododendron simsii HOM05D001020 ORTHO05D001137 2.7e-07 58.9 64 46.9
Ah.05g168920 Amaranthus hybridus HOM05D001020 ORTHO05D001137 3.5e-07 58.5 54 53.7
Rhsim02G0036600 Rhododendron simsii HOM05D001020 ORTHO05D001137 3.5e-07 58.5 65 46.2
SGA_v2.0_scaffold41G15859 Striga asiatica HOM05D001020 ORTHO05D001137 3.5e-07 58.5 66 51.5
COL.COLO4_15988 Corchorus olitorius HOM05D001020 ORTHO05D001137 4.6e-07 58.2 61 47.5
Lj6C663G9 Lonicera japonica HOM05D001020 ORTHO05D001137 4.6e-07 58.2 55 54.5
CSS0046099 Camellia sinensis var. sinensis HOM05D001020 ORTHO05D001137 6.0e-07 57.8 65 46.2
Cfa016745 Carpinus fangiana HOM05D001020 ORTHO05D001137 6.0e-07 57.8 51 54.9
AUR62013455 Chenopodium quinoa HOM05D001020 ORTHO05D001137 6.0e-07 57.8 54 53.7
Dinv29874 Davidia involucrata HOM05D001020 ORTHO05D001137 6.0e-07 57.8 55 50.9
Oeu055204.1 Olea europaea HOM05D001020 ORTHO05D001137 6.0e-07 57.8 59 47.5
SGA_v2.0_scaffold41G15853 Striga asiatica HOM05D001020 ORTHO05D001137 6.0e-07 57.8 66 50.0
MSTRG.10460 Avicennia marina HOM05D001020 ORTHO05D001137 7.9e-07 57.4 45 62.2
AUR62028238 Chenopodium quinoa HOM05D001020 ORTHO05D001137 7.9e-07 57.4 64 45.3
PGSC0003DMG400027351 Solanum tuberosum HOM05D001020 ORTHO05D001137 7.9e-07 57.4 80 42.5
AT5G43390 Arabidopsis thaliana HOM05D001020 ORTHO05D001137 1.0e-06 57.0 62 46.8
ECA233G3414 Erigeron canadensis HOM05D001020 ORTHO05D001137 1.0e-06 57.0 61 42.6
BcaC06g31702 Brassica carinata HOM05D001020 ORTHO05D001137 1.3e-06 56.6 62 48.4
BcaC06g34656 Brassica carinata HOM05D001020 ORTHO05D001137 1.3e-06 56.6 62 48.4
A06p47860 Brassica napus HOM05D001020 ORTHO05D001137 1.3e-06 56.6 62 48.4
C07p25970 Brassica napus HOM05D001020 ORTHO05D001137 1.3e-06 56.6 62 48.4
BolC7t43124H Brassica oleracea HOM05D001020 ORTHO05D001137 1.3e-06 56.6 62 48.4
BraA06t27656Z Brassica rapa HOM05D001020 ORTHO05D001137 1.3e-06 56.6 62 48.4
CSS0016216 Camellia sinensis var. sinensis HOM05D001020 ORTHO05D001137 1.3e-06 56.6 44 59.1
Cfa016746 Carpinus fangiana HOM05D001020 ORTHO05D001137 1.3e-06 56.6 44 59.1
AUR62024139 Chenopodium quinoa HOM05D001020 ORTHO05D001137 1.3e-06 56.6 44 61.4
Haze_19758 Corylus avellana HOM05D001020 ORTHO05D001137 1.3e-06 56.6 44 59.1
DCAR_002346 Daucus carota HOM05D001020 ORTHO05D001137 1.3e-06 56.6 54 48.1
Peaxi162Scf00024g00302 Petunia axillaris HOM05D001020 ORTHO05D001137 1.3e-06 56.6 63 47.6
Potri.003G165200 Populus trichocarpa HOM05D001020 ORTHO05D001137 1.3e-06 56.6 66 48.5
Rhsim12G0103500 Rhododendron simsii HOM05D001020 ORTHO05D001137 1.3e-06 56.6 61 49.2
vmacro15433 Vaccinium macrocarpon HOM05D001020 ORTHO05D001137 1.3e-06 56.6 65 46.2
Aqoxy3G01762 Aquilegia oxysepala HOM05D001020 ORTHO05D001137 1.8e-06 56.2 58 50.0
COL.COLO4_07196 Corchorus olitorius HOM05D001020 ORTHO05D001137 1.8e-06 56.2 65 44.6
Medtr5g045160 Medicago truncatula HOM05D001020 ORTHO05D001137 1.8e-06 56.2 45 62.2
Sed0026107 Sechium edule HOM05D001020 ORTHO05D001137 1.8e-06 56.2 66 47.0
SGA_v2.0_scaffold409G51094 Striga asiatica HOM05D001020 ORTHO05D001137 1.8e-06 56.2 66 47.0
TAR622G1374 Trochodendron aralioides HOM05D001020 ORTHO05D001137 1.8e-06 56.2 55 50.9
GSVIVG01027783001 Vitis vinifera HOM05D001020 ORTHO05D001137 1.8e-06 56.2 65 43.1
Actinidia30602 Actinidia chinensis HOM05D001020 ORTHO05D001137 2.3e-06 55.8 55 49.1
CAN.G793.42 Capsicum annuum HOM05D001020 ORTHO05D001137 2.3e-06 55.8 44 59.1
AUR62035320 Chenopodium quinoa HOM05D001020 ORTHO05D001137 2.3e-06 55.8 51 51.0
Thhalv10003164m.g Eutrema salsugineum HOM05D001020 ORTHO05D001137 2.3e-06 55.8 60 48.3
Sabra03G0120400 Salix brachista HOM05D001020 ORTHO05D001137 2.3e-06 55.8 66 47.0
SalBow5G5676 Salvia bowleyana HOM05D001020 ORTHO05D001137 2.3e-06 55.8 61 49.2
Aqoxy7G01541 Aquilegia oxysepala HOM05D001020 ORTHO05D001137 3.0e-06 55.5 75 41.3
AL8G16970 Arabidopsis lyrata HOM05D001020 ORTHO05D001137 3.0e-06 55.5 62 46.8
CARHR180220 Cardamine hirsuta HOM05D001020 ORTHO05D001137 3.0e-06 55.5 66 42.4
AUR62007684 Chenopodium quinoa HOM05D001020 ORTHO05D001137 3.0e-06 55.5 54 51.9
DCAR_030720 Daucus carota HOM05D001020 ORTHO05D001137 3.0e-06 55.5 54 46.3
PSO170G2024 Papaver somniferum HOM05D001020 ORTHO05D001137 3.0e-06 55.5 54 50.0
PSO478G2143 Papaver somniferum HOM05D001020 ORTHO05D001137 3.0e-06 55.5 44 56.8
Peaxi162Scf00409g00093 Petunia axillaris HOM05D001020 ORTHO05D001137 3.0e-06 55.5 62 46.8
Prupe.1G218700 Prunus persica HOM05D001020 ORTHO05D001137 3.0e-06 55.5 45 55.6
PGSC0003DMG400011711 Solanum tuberosum HOM05D001020 ORTHO05D001137 3.0e-06 55.5 45 60.0
Aqoxy3G01781 Aquilegia oxysepala HOM05D001020 ORTHO05D001137 3.9e-06 55.1 62 45.2
AL8G16960 Arabidopsis lyrata HOM05D001020 ORTHO05D001137 3.9e-06 55.1 62 45.2
AT5G43400 Arabidopsis thaliana HOM05D001020 ORTHO05D001137 3.9e-06 55.1 60 45.0
CSS0009406 Camellia sinensis var. sinensis HOM05D001020 ORTHO05D001137 3.9e-06 55.1 36 69.4
Ca_04996_v3 Cicer arietinum L. HOM05D001020 ORTHO05D001137 3.9e-06 55.1 45 60.0
COL.COLO4_12825 Corchorus olitorius HOM05D001020 ORTHO05D001137 3.9e-06 55.1 60 50.0
CsaV3_4G031010 Cucumis sativus L. HOM05D001020 ORTHO05D001137 3.9e-06 55.1 66 47.0
Duzib151G0436 Durio zibethinus HOM05D001020 ORTHO05D001137 3.9e-06 55.1 42 57.1
Rhsim02G0036700 Rhododendron simsii HOM05D001020 ORTHO05D001137 3.9e-06 55.1 65 44.6
SalBow7G1706 Salvia bowleyana HOM05D001020 ORTHO05D001137 3.9e-06 55.1 59 52.5
AT5G13210 Arabidopsis thaliana HOM05D001020 ORTHO05D001137 5.1e-06 54.7 45 55.6
Cpa.g.sc188.12 Carica papaya HOM05D001020 ORTHO05D001137 5.1e-06 54.7 45 57.8
AUR62032660 Chenopodium quinoa HOM05D001020 ORTHO05D001137 5.1e-06 54.7 35 68.6
DCAR_002348 Daucus carota HOM05D001020 ORTHO05D001137 5.1e-06 54.7 59 47.5
Dinv33703 Davidia involucrata HOM05D001020 ORTHO05D001137 5.1e-06 54.7 52 51.9
Nitab4.5_0000044g0130 Nicotiana tabacum HOM05D001020 ORTHO05D001137 5.1e-06 54.7 62 46.8
TWI36G1259 Tripterygium wilfordii HOM05D001020 ORTHO05D001137 5.1e-06 54.7 56 53.6
AL6G23820 Arabidopsis lyrata HOM05D001020 ORTHO05D001137 6.7e-06 54.3 45 55.6
Migut.L01909 Erythranthe guttata HOM05D001020 ORTHO05D001137 6.7e-06 54.3 73 45.2
MD06G1212600 Malus domestica HOM05D001020 ORTHO05D001137 6.7e-06 54.3 66 43.9
Manes.09G186101 Manihot esculenta HOM05D001020 ORTHO05D001137 6.7e-06 54.3 56 48.2
Nn1g01997 Nelumbo nucifera HOM05D001020 ORTHO05D001137 6.7e-06 54.3 44 59.1
Nitab4.5_0004343g0030 Nicotiana tabacum HOM05D001020 ORTHO05D001137 6.7e-06 54.3 62 46.8
PSO017G6483 Papaver somniferum HOM05D001020 ORTHO05D001137 6.7e-06 54.3 68 41.2
Peaxi162Scf00336g00172 Petunia axillaris HOM05D001020 ORTHO05D001137 6.7e-06 54.3 65 43.1
Rhsim12G0020300 Rhododendron simsii HOM05D001020 ORTHO05D001137 6.7e-06 54.3 45 57.8
Thecc.04G267200 Theobroma cacao HOM05D001020 ORTHO05D001137 6.7e-06 54.3 51 51.0
vmacro16757 Vaccinium macrocarpon HOM05D001020 ORTHO05D001137 6.7e-06 54.3 45 55.6
HPP92_021903 Vanilla planifolia HOM05D001020 ORTHO05D001137 6.7e-06 54.3 57 50.9
ECA240G4289 Erigeron canadensis HOM05D001020 ORTHO05D001137 8.7e-06 53.9 61 42.6
FAN18G0521 Fragaria x ananassa HOM05D001020 ORTHO05D001137 8.7e-06 53.9 83 41.0
FAN18G1932 Fragaria x ananassa HOM05D001020 ORTHO05D001137 8.7e-06 53.9 83 41.0
Manes.09G186000 Manihot esculenta HOM05D001020 ORTHO05D001137 8.7e-06 53.9 56 50.0
PSO478G1194 Papaver somniferum HOM05D001020 ORTHO05D001137 8.7e-06 53.9 38 63.2
Psat2g131480 Pisum sativum HOM05D001020 ORTHO05D001137 8.7e-06 53.9 45 57.8
Psat2g131520 Pisum sativum HOM05D001020 ORTHO05D001137 8.7e-06 53.9 45 57.8
Rhsim12G0020100 Rhododendron simsii HOM05D001020 ORTHO05D001137 8.7e-06 53.9 45 57.8


User provided reference genes

Program Settings