Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p004772 Quercus lobata HOM05D002930 ORTHO05D003283 2.0e-220 769.2 520 100.0
QL03p004191 Quercus lobata HOM05D002930 ORTHO05D003283 2.7e-60 237.3 128 91.4
QL05p062013 Quercus lobata HOM05D000477 ORTHO05D000338 1.1e-37 162.2 315 46.7
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 1.6e-28 131.7 104 68.3
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 2.7e-28 131.0 104 68.3
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.1e-28 129.8 104 61.5
Gohir.D13G110101 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.8e-27 128.3 104 62.5
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.8e-27 128.3 104 62.5
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 8.2e-25 119.4 104 59.6
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 8.2e-25 119.4 104 60.6
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 2.4e-24 117.9 104 59.6
QL08p051960 Quercus lobata HOM05D000477 ORTHO05D337589 5.3e-24 116.7 270 44.1
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 7.0e-24 116.3 100 60.0
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.2e-23 115.5 100 62.0
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 2.6e-23 114.4 107 57.0
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 2.6e-23 114.4 95 62.1
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 4.5e-23 113.6 100 58.0
Rhsim01G0277700 Rhododendron simsii HOM05D002930 ORTHO05D003283 5.9e-23 113.2 100 58.0
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 5.9e-23 113.2 100 59.0
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 7.7e-23 112.8 100 61.0
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 1.0e-22 112.5 100 58.0
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 1.3e-22 112.1 100 58.0
Ah.04g159840 Amaranthus hybridus HOM05D002930 ORTHO05D003283 1.7e-22 111.7 100 57.0
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 1.7e-22 111.7 100 59.0
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 1.7e-22 111.7 104 56.7
Actinidia21090 Actinidia chinensis HOM05D002930 ORTHO05D003283 2.9e-22 110.9 100 60.0
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 2.9e-22 110.9 100 58.0
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 2.9e-22 110.9 100 58.0
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 2.9e-22 110.9 100 58.0
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 2.9e-22 110.9 100 57.0
CiPaw.07G095900 Carya illinoinensis HOM05D002930 ORTHO05D003283 3.8e-22 110.5 100 59.0
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 3.8e-22 110.5 100 60.0
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 3.8e-22 110.5 104 60.6
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 5.0e-22 110.2 100 58.0
Gohir.A08G185020 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.0e-22 110.2 100 56.0
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.0e-22 110.2 100 56.0
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 6.5e-22 109.8 100 58.0
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 8.5e-22 109.4 100 55.0
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 8.5e-22 109.4 104 56.7
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 8.5e-22 109.4 135 50.4
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 1.1e-21 109.0 100 59.0
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.1e-21 109.0 100 55.0
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.1e-21 109.0 100 54.0
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.1e-21 109.0 100 55.0
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 1.5e-21 108.6 106 58.5
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 1.5e-21 108.6 100 59.0
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 1.9e-21 108.2 100 56.0
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 3.2e-21 107.5 100 56.0
HPP92_017200 Vanilla planifolia HOM05D002930 ORTHO05D003283 3.2e-21 107.5 124 53.2
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 4.2e-21 107.1 100 55.0
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 4.2e-21 107.1 104 56.7
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 5.5e-21 106.7 106 54.7
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 7.2e-21 106.3 100 53.0
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 7.2e-21 106.3 100 55.0
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 7.2e-21 106.3 100 58.0
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 7.2e-21 106.3 113 46.9
Gorai.005G109700 Gossypium raimondii HOM05D002930 ORTHO05D003283 9.4e-21 105.9 100 54.0
Gohir.D10G213350 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.2e-20 105.5 100 53.0
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 1.2e-20 105.5 98 57.1
Gohir.D02G096000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.6e-20 105.1 100 53.0
Gorai.008G067700 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.1e-20 104.8 100 55.0
Lalb_Chr04g0260851 Lupinus albus HOM05D002930 ORTHO05D003283 2.1e-20 104.8 106 53.8
HPP92_027329 Vanilla planifolia HOM05D002930 ORTHO05D003283 2.1e-20 104.8 100 58.0
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 2.7e-20 104.4 112 49.1
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 3.6e-20 104.0 111 52.3
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 3.6e-20 104.0 104 56.7
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 4.7e-20 103.6 100 54.0
DCAR_012455 Daucus carota HOM05D002930 ORTHO05D003283 8.0e-20 102.8 100 58.0
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 8.0e-20 102.8 112 51.8
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 1.0e-19 102.4 111 50.5
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 1.8e-19 101.7 100 56.0
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 1.8e-19 101.7 134 49.3
Psat6g169880 Pisum sativum HOM05D002930 ORTHO05D003283 2.3e-19 101.3 106 50.0
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 3.0e-19 100.9 100 51.0
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 3.0e-19 100.9 112 52.7
CARHR143440 Cardamine hirsuta HOM05D002930 ORTHO05D003283 3.0e-19 100.9 100 53.0
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 3.0e-19 100.9 100 53.0
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 3.0e-19 100.9 100 52.0
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 4.0e-19 100.5 100 52.0
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 4.0e-19 100.5 100 55.0
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 5.2e-19 100.1 100 50.0
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 5.2e-19 100.1 113 45.1
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 6.7e-19 99.8 111 47.7
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 6.7e-19 99.8 111 51.4
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 8.8e-19 99.4 100 52.0
Gohir.D04G169700 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.8e-19 99.4 95 52.6
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 8.8e-19 99.4 100 51.0
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 8.8e-19 99.4 100 51.0
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 8.8e-19 99.4 100 53.0
Sc05g0005220 Simmondsia chinensis HOM05D002930 ORTHO05D003283 8.8e-19 99.4 122 48.4
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 8.8e-19 99.4 100 51.0
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.2e-18 99.0 100 51.0
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 1.2e-18 99.0 100 51.0
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 1.2e-18 99.0 100 51.0
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 1.2e-18 99.0 100 51.0
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 1.2e-18 99.0 100 51.0
Gorai.012G158000 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.2e-18 99.0 100 52.0
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 1.2e-18 99.0 106 52.8
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 2.0e-18 98.2 100 50.0
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 2.0e-18 98.2 100 49.0
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 2.6e-18 97.8 100 50.0
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 2.6e-18 97.8 148 43.2
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 3.3e-18 97.4 111 48.6
MBI19_g21638_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 3.3e-18 97.4 100 53.0
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 4.4e-18 97.1 111 49.5
Gohir.D05G174300 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.4e-18 97.1 102 51.0
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 4.4e-18 97.1 108 48.1
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 5.7e-18 96.7 100 49.0
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 5.7e-18 96.7 113 47.8
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 5.7e-18 96.7 148 42.6
Gohir.D01G034401 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.7e-18 96.7 100 51.0
Aqoxy211s001 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 9.7e-18 95.9 100 51.0
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 9.7e-18 95.9 100 51.0
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 9.7e-18 95.9 113 48.7
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 1.3e-17 95.5 113 46.9
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 1.7e-17 95.1 113 48.7
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 2.8e-17 94.4 100 51.0
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 2.8e-17 94.4 100 51.0
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 4.8e-17 93.6 100 49.0
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 6.3e-17 93.2 112 46.4
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.1e-16 92.4 106 51.9
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 1.1e-16 92.4 100 47.0
CDE08G1131 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 2.4e-16 91.3 100 50.0
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 7.0e-16 89.7 100 47.0
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 1.2e-15 89.0 100 50.0
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 2.7e-15 87.8 111 45.0
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 5.9e-15 86.7 98 45.9
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.7e-14 85.1 100 47.0
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 1.7e-14 85.1 98 45.9
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 3.2e-13 80.9 98 43.9
SHI15440 Sapria himalayana HOM05D002930 ORTHO05D003283 4.2e-13 80.5 98 46.9
Gohir.A07G059600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.5e-13 80.1 77 53.2
Gohir.D07G116100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.5e-13 80.1 77 53.2
Gohir.D10G155925 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.5e-13 80.1 77 53.2
Gorai.001G179200 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.5e-13 80.1 77 53.2
Gorai.013G151200 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.5e-13 80.1 77 53.2
Gohir.D07G104000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 9.4e-13 79.3 77 53.2
Gohir.D04G075400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.2e-12 79.0 77 53.2
Gohir.D11G258550 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-11 75.5 77 49.4
Gorai.007G276800 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.4e-11 75.5 77 49.4
Gohir.D01G193850 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.8e-11 75.1 79 50.6
Gohir.D06G133100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.3e-11 74.7 76 51.3
Gohir.D11G053151 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.3e-11 74.7 79 51.9
Gohir.D02G064100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.8e-11 73.2 74 51.4
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 2.6e-10 71.2 108 36.1
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 9.8e-10 69.3 85 49.4
QL10p040279 Quercus lobata HOM05D020057 ORTHO05D000594 8.3e-09 66.2 27 100.0
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 2.4e-08 64.7 108 35.2
QL02p013635 Quercus lobata HOM05D000219 ORTHO05D338170 9.1e-08 62.8 127 37.8
Gorai.009G179600 Gossypium raimondii HOM05D002930 ORTHO05D003283 7.7e-07 59.7 36 75.0
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 1.0e-06 59.3 100 34.0
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 1.3e-06 58.9 100 32.0
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 5.0e-06 57.0 62 43.5


User provided reference genes

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