Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 1.1e-133 479.9 244 100.0
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.6e-108 396.4 251 82.1
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 8.1e-108 394.0 247 83.4
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 3.1e-107 392.1 249 82.7
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.5e-101 373.2 249 79.5
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 9.0e-99 364.0 250 76.0
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 5.8e-98 361.3 250 75.2
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 6.4e-97 357.8 249 77.1
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 6.4e-97 357.8 248 75.4
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.1e-96 357.1 251 75.3
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.4e-96 356.7 247 75.3
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.4e-96 356.7 249 75.9
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.9e-96 356.3 250 76.4
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.2e-95 353.6 251 75.7
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 6.0e-95 351.3 249 75.5
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.8e-94 349.7 246 73.2
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.3e-94 349.4 247 76.5
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 5.1e-94 348.2 249 72.3
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 8.7e-94 347.4 251 74.5
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 8.7e-94 347.4 250 72.8
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 8.7e-94 347.4 242 74.4
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 4.3e-93 345.1 246 72.0
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 7.4e-93 344.4 230 78.3
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 1.1e-91 340.5 253 71.5
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 1.4e-91 340.1 252 72.2
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.8e-91 339.7 250 72.8
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 5.3e-91 338.2 247 74.1
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 6.9e-91 337.8 247 72.1
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.2e-90 337.0 246 69.9
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 2.0e-90 336.3 248 73.0
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.6e-90 335.9 247 72.5
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.0e-89 334.0 246 69.5
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.7e-89 333.2 256 69.1
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.9e-89 332.4 244 72.1
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.9e-89 332.4 244 72.1
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 2.9e-89 332.4 267 67.4
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 8.4e-89 330.9 247 69.6
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-88 330.1 262 68.7
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.9e-88 329.7 246 68.7
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.6e-87 326.6 248 68.5
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 2.7e-87 325.9 251 69.3
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 6.0e-87 324.7 259 67.2
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 3.9e-86 322.0 248 67.3
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 5.1e-86 321.6 253 67.2
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 6.7e-86 321.2 245 68.2
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 1.9e-85 319.7 246 67.5
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 1.9e-85 319.7 235 70.6
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.9e-85 319.7 256 66.8
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 2.5e-85 319.3 246 67.9
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 2.5e-85 319.3 244 70.5
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 4.3e-85 318.5 235 70.2
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 4.3e-85 318.5 249 66.7
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 5.7e-85 318.2 249 68.3
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 7.4e-85 317.8 255 67.1
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 2.8e-84 315.8 252 66.7
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-83 313.9 288 62.2
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.8e-83 313.2 249 65.9
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.4e-83 312.8 245 66.1
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 2.4e-83 312.8 242 69.0
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 3.1e-83 312.4 240 69.6
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 4.1e-83 312.0 239 69.5
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 4.1e-83 312.0 240 69.6
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 6.9e-83 311.2 241 70.1
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 5.9e-82 308.1 173 85.0
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 1.0e-81 307.4 181 82.3
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.7e-81 306.6 246 67.5
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.7e-81 306.6 252 67.5
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 5.0e-81 305.1 246 64.6
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 3.2e-80 302.4 259 63.7
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 9.4e-80 300.8 234 67.9
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 2.7e-79 299.3 247 66.0
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 3.6e-79 298.9 261 62.8
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 3.6e-79 298.9 261 62.8
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.6e-79 298.9 256 65.2
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 6.1e-79 298.1 230 68.7
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 7.9e-79 297.7 235 66.0
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 1.0e-78 297.4 244 64.3
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 1.5e-77 293.5 161 86.3
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 4.3e-77 292.0 250 64.4
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 5.7e-77 291.6 248 65.3
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 9.7e-77 290.8 246 65.4
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 2.8e-76 289.3 251 65.7
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 3.7e-76 288.9 235 65.1
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 3.7e-76 288.9 246 64.6
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 4.8e-76 288.5 247 65.2
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.1e-75 287.3 253 61.3
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 2.4e-75 286.2 254 59.4
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 2.0e-74 283.1 227 65.2
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 2.0e-74 283.1 247 61.5
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 2.6e-74 282.7 243 62.1
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.0e-73 280.8 216 69.0
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 2.2e-73 279.6 258 58.1
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 1.6e-71 273.5 274 57.7
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.4e-70 270.4 247 59.5
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 1.1e-69 267.3 238 61.8
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 8.2e-68 261.2 210 64.3
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.4e-67 260.4 216 61.1
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 1.5e-66 256.9 241 56.8
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 4.5e-66 255.4 225 64.0
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.0e-65 254.2 214 58.4
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 1.4e-64 250.4 143 86.0
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 5.5e-64 248.4 143 84.6
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.7e-57 226.9 208 62.5
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.1e-56 224.2 176 69.3
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.3e-54 216.5 236 55.9
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 3.5e-50 202.6 134 73.9
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 3.2e-48 196.1 171 61.4
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.4e-46 190.7 154 68.2
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 2.0e-45 186.8 191 47.6
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 2.7e-42 176.4 166 50.0
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 8.6e-41 171.4 94 89.4
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 5.5e-40 168.7 230 40.4
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 1.6e-39 167.2 152 65.8
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 4.0e-38 162.5 211 42.2
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 5.7e-37 158.7 157 55.4
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.9e-36 155.6 135 65.9
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 6.4e-28 128.6 95 66.3
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 5.6e-24 115.5 68 79.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 8.9e-14 81.6 177 29.4
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 1.5e-13 80.9 132 34.8
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.2e-12 77.0 201 28.4
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.4e-06 57.0 35 74.3
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 3.1e-06 56.6 62 45.2


User provided reference genes

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