Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 1.6e-158 562.8 294 100.0
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 9.7e-140 500.4 295 88.8
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 1.4e-135 486.5 295 86.1
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 4.2e-135 485.0 295 85.4
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 3.6e-134 481.9 296 87.2
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 2.3e-133 479.2 297 85.5
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 6.3e-131 471.1 296 84.8
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.2e-131 470.7 296 83.8
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 1.4e-130 469.9 296 82.1
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 3.1e-130 468.8 296 84.5
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 4.1e-130 468.4 295 82.7
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 5.3e-130 468.0 296 82.4
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 9.1e-130 467.2 296 83.4
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 1.2e-129 466.8 295 82.0
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 2.0e-129 466.1 296 83.1
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.0e-129 466.1 296 83.4
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 3.5e-129 465.3 297 83.8
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 3.5e-129 465.3 295 82.4
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 3.5e-129 465.3 296 83.8
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 4.5e-129 464.9 295 83.1
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.9e-129 464.5 296 82.8
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 7.7e-129 464.2 295 83.1
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.0e-128 463.8 295 81.0
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.3e-128 463.4 296 82.8
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.2e-128 462.6 296 82.8
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 2.9e-128 462.2 295 82.7
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 6.5e-128 461.1 297 82.8
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.9e-127 459.5 297 80.8
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 3.2e-127 458.8 295 82.7
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 4.2e-127 458.4 299 81.3
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 5.5e-127 458.0 295 82.0
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 5.5e-127 458.0 294 82.0
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 7.2e-127 457.6 295 82.7
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 9.4e-127 457.2 295 83.1
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.2e-126 456.8 295 82.0
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.0e-125 453.8 295 80.7
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 1.0e-125 453.8 295 81.0
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.8e-125 453.0 291 81.1
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 2.3e-125 452.6 296 80.7
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 2.3e-125 452.6 295 80.3
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 5.2e-125 451.4 295 80.3
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 1.1e-124 450.3 297 81.5
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.1e-124 450.3 296 80.1
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.5e-124 449.9 297 81.1
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 1.5e-124 449.9 297 81.1
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 3.3e-124 448.7 298 80.5
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 5.7e-124 448.0 298 80.5
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 7.5e-124 447.6 295 81.7
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 3.7e-123 445.3 294 79.9
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 4.8e-123 444.9 311 75.2
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 8.2e-123 444.1 294 79.6
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.8e-122 443.0 295 79.0
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 5.3e-122 441.4 305 78.7
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 5.3e-122 441.4 298 80.9
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 5.3e-122 441.4 296 79.1
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 9.1e-122 440.7 295 79.3
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.6e-121 439.9 303 78.5
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 2.9e-120 435.6 294 78.9
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 5.0e-120 434.9 298 77.9
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 2.5e-119 432.6 293 78.8
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 3.2e-119 432.2 294 77.9
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 4.2e-119 431.8 295 77.6
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.6e-118 429.9 294 77.2
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 4.7e-118 428.3 295 76.6
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 6.1e-118 427.9 300 76.7
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 8.0e-118 427.6 295 77.6
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.8e-117 426.4 294 76.5
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.0e-116 422.9 297 76.4
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 2.6e-116 422.5 294 78.2
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 5.7e-116 421.4 294 74.1
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 7.5e-116 421.0 300 75.3
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 9.8e-116 420.6 294 76.5
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 2.8e-115 419.1 294 76.5
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 3.7e-115 418.7 294 75.5
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 1.4e-114 416.8 294 76.2
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 2.7e-113 412.5 296 75.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 3.5e-113 412.1 298 73.2
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 7.7e-113 411.0 297 74.1
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.3e-112 410.2 298 74.2
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 6.5e-112 407.9 228 89.5
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.1e-111 407.1 297 72.7
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 3.2e-111 405.6 294 73.5
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 4.2e-111 405.2 297 75.1
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 7.2e-111 404.4 239 88.3
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 9.4e-111 404.1 294 75.5
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 9.4e-111 404.1 294 75.5
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 9.4e-111 404.1 294 75.5
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 2.1e-110 402.9 294 73.8
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 2.1e-110 402.9 294 75.5
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 2.1e-110 402.9 294 75.5
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 2.7e-110 402.5 295 71.5
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 1.0e-109 400.6 294 73.8
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.8e-109 399.8 295 71.5
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 7.5e-108 394.4 294 71.8
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 9.8e-108 394.0 298 71.1
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 9.8e-108 394.0 296 72.0
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 8.3e-107 391.0 298 70.5
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 1.4e-106 390.2 298 71.5
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.9e-103 379.8 235 80.4
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 6.1e-102 374.8 264 73.9
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 5.2e-101 371.7 298 68.5
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 5.2e-101 371.7 295 68.8
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 8.3e-99 364.4 233 79.4
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 3.9e-96 355.5 297 66.3
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 9.5e-95 350.9 227 78.0
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.6e-94 349.0 252 73.0
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 4.9e-91 338.6 225 75.1
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 4.9e-91 338.6 225 75.1
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 6.4e-91 338.2 226 74.8
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 9.2e-90 334.3 204 81.9
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.2e-84 317.4 212 79.7
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.4e-82 310.5 229 68.6
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 2.7e-81 306.2 228 68.9
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 4.6e-73 278.9 242 60.3
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 2.3e-72 276.6 203 66.0
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 2.8e-62 243.0 137 85.4
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.4e-61 240.7 145 80.7
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 3.8e-51 206.1 225 47.1
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 3.5e-49 199.5 210 49.0
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 6.3e-38 162.2 86 93.0
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 6.3e-38 162.2 222 40.1
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 1.8e-37 160.6 88 93.2
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 2.5e-34 150.2 82 89.0
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 8.5e-27 125.2 64 96.9
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 7.7e-12 75.5 85 57.6


User provided reference genes

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