Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p004020 Quercus lobata HOM05D000205 ORTHO05D337706 6.5e-51 203.8 102 100.0
Nitab4.5_0001423g0030 Nicotiana tabacum HOM05D000205 ORTHO05D000438 4.6e-12 74.7 69 49.3
Rhsim02G0014800 Rhododendron simsii HOM05D000205 ORTHO05D000438 4.3e-10 68.2 70 45.7
Cfa006528 Carpinus fangiana HOM05D000205 ORTHO05D000438 2.1e-09 65.9 114 36.0
Eucgr.B02013 Eucalyptus grandis HOM05D000205 ORTHO05D000438 4.7e-09 64.7 133 33.8
BcaB04g20142 Brassica carinata HOM05D000205 ORTHO05D000438 1.4e-08 63.2 89 42.7
DCAR_022254 Daucus carota HOM05D000205 ORTHO05D000438 1.4e-08 63.2 91 38.5
Solyc10g062085.2 Solanum lycopersicum HOM05D000205 ORTHO05D000438 2.3e-08 62.4 44 68.2
Sopen10g026260 Solanum pennellii HOM05D000205 ORTHO05D000438 2.3e-08 62.4 44 68.2
PGR083G1419 Punica granatum HOM05D000205 ORTHO05D000438 6.8e-08 60.8 133 33.1
CDE02G2826 Ceratophyllum demersum HOM05D000205 ORTHO05D000438 1.2e-07 60.1 110 35.5
FAN07G0051 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.2e-07 60.1 112 33.9
FAN07G2932 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.2e-07 60.1 112 33.9
MD04G1211000 Malus domestica HOM05D000205 ORTHO05D000438 1.2e-07 60.1 43 69.8
SalBow5G5707 Salvia bowleyana HOM05D000205 ORTHO05D000438 1.2e-07 60.1 62 53.2
DCAR_022253 Daucus carota HOM05D000205 ORTHO05D000438 2.0e-07 59.3 111 33.3
Lj7A485G34 Lonicera japonica HOM05D000205 ORTHO05D000438 2.0e-07 59.3 41 68.3
Prupe.6G331800 Prunus persica HOM05D000205 ORTHO05D000438 2.6e-07 58.9 41 68.3
Sabra13G0028100 Salix brachista HOM05D000205 ORTHO05D000438 2.6e-07 58.9 113 35.4
Haze_15078 Corylus avellana HOM05D000205 ORTHO05D002459 3.4e-07 58.5 89 38.2
Duzib177G0103 Durio zibethinus HOM05D000205 ORTHO05D000438 3.4e-07 58.5 113 36.3
Dinv40242 Davidia involucrata HOM05D000205 ORTHO05D000438 4.4e-07 58.2 41 65.9
Oeu001446.1 Olea europaea HOM05D000205 ORTHO05D000438 4.4e-07 58.2 81 44.4
Rhsim02G0015500 Rhododendron simsii HOM05D000205 ORTHO05D000438 4.4e-07 58.2 92 37.0
TAR633G2210 Trochodendron aralioides HOM05D000205 ORTHO05D000438 4.4e-07 58.2 82 40.2
MELO3C015350.2 Cucumis melo HOM05D000205 ORTHO05D000438 5.8e-07 57.8 64 48.4
CSS0000054 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 7.5e-07 57.4 41 63.4
CSS0034914 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 7.5e-07 57.4 41 63.4
CiPaw.07G013600 Carya illinoinensis HOM05D000205 ORTHO05D000438 7.5e-07 57.4 89 37.1
ECA246G2264 Erigeron canadensis HOM05D000205 ORTHO05D000438 7.5e-07 57.4 41 65.9
QL08p050970 Quercus lobata HOM05D000015 ORTHO05D000249 7.5e-07 57.4 42 61.9
GSVIVG01022034001 Vitis vinifera HOM05D000205 ORTHO05D000438 7.5e-07 57.4 41 65.9
CANSAT54G1961 Cannabis sativa HOM05D000205 ORTHO05D000438 9.8e-07 57.0 41 65.9
MD12G1225300 Malus domestica HOM05D000205 ORTHO05D000438 9.8e-07 57.0 41 65.9
Nitab4.5_0000059g0360 Nicotiana tabacum HOM05D000205 ORTHO05D000438 9.8e-07 57.0 81 42.0
PGSC0003DMG400006285 Solanum tuberosum HOM05D000205 ORTHO05D000438 9.8e-07 57.0 86 41.9
PGSC0003DMG400018246 Solanum tuberosum HOM05D000205 ORTHO05D000438 9.8e-07 57.0 86 41.9
Actinidia23603 Actinidia chinensis HOM05D000205 ORTHO05D003784 1.3e-06 56.6 41 63.4
CSS0037127 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 1.3e-06 56.6 69 43.5
Gorai.005G056400 Gossypium raimondii HOM05D000205 ORTHO05D000438 1.3e-06 56.6 80 40.0
Nn3g21202 Nelumbo nucifera HOM05D000205 ORTHO05D000438 1.3e-06 56.6 41 65.9
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 1.3e-06 56.6 118 39.0
Sed0015280 Sechium edule HOM05D000205 ORTHO05D000438 1.3e-06 56.6 64 48.4
Solyc01g080680.3 Solanum lycopersicum HOM05D000205 ORTHO05D000438 1.3e-06 56.6 86 40.7
Sopen01g030820 Solanum pennellii HOM05D000205 ORTHO05D000438 1.3e-06 56.6 86 40.7
TAR362G1207 Trochodendron aralioides HOM05D000205 ORTHO05D000438 1.3e-06 56.6 41 61.0
vmacro05042 Vaccinium macrocarpon HOM05D000205 ORTHO05D000438 1.3e-06 56.6 126 35.7
GSVIVG01022035001 Vitis vinifera HOM05D000205 ORTHO05D000438 1.3e-06 56.6 41 63.4
Actinidia05731 Actinidia chinensis HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
CAN.G627.9 Capsicum annuum HOM05D000205 ORTHO05D000438 1.7e-06 56.2 81 42.0
CiPaw.07G013700 Carya illinoinensis HOM05D000205 ORTHO05D000438 1.7e-06 56.2 111 33.3
Dinv22917 Davidia involucrata HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
Eucgr.B02014 Eucalyptus grandis HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 65.9
FvH4_6g05130 Fragaria vesca HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
FAN05G2081 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
FAN14G0109 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
FAN14G4914 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
Manes.09G162400 Manihot esculenta HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 65.9
Manes.15G019200 Manihot esculenta HOM05D000205 ORTHO05D000438 1.7e-06 56.2 80 42.5
Rhsim07G0178700 Rhododendron simsii HOM05D000205 ORTHO05D000438 1.7e-06 56.2 41 63.4
RcHm_v2.0_Chr3g0453651 Rosa chinensis HOM05D000205 ORTHO05D000438 1.7e-06 56.2 128 30.5
RcHm_v2.0_Chr3g0453671 Rosa chinensis HOM05D000205 ORTHO05D000438 1.7e-06 56.2 66 48.5
Ah.06g190210 Amaranthus hybridus HOM05D000205 ORTHO05D000438 2.2e-06 55.8 40 70.0
ClCG03G016730 Citrullus lanatus HOM05D000205 ORTHO05D000438 2.2e-06 55.8 40 65.0
Ciclev10004839m.g Citrus clementina HOM05D000205 ORTHO05D000438 2.2e-06 55.8 83 43.4
Dinv40249 Davidia involucrata HOM05D000205 ORTHO05D000438 2.2e-06 55.8 40 65.0
Hma1.2p1_0617F.1_g190090 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 2.2e-06 55.8 45 57.8
Peaxi162Scf00095g00120 Petunia axillaris HOM05D000205 ORTHO05D000438 2.2e-06 55.8 81 42.0
PGR004G2166 Punica granatum HOM05D000205 ORTHO05D000438 2.2e-06 55.8 42 61.9
Sed0020998 Sechium edule HOM05D000205 ORTHO05D000438 2.2e-06 55.8 40 65.0
MSTRG.17024 Avicennia marina HOM05D000205 ORTHO05D000438 2.9e-06 55.5 57 49.1
ClCG03G016720 Citrullus lanatus HOM05D000205 ORTHO05D000438 2.9e-06 55.5 64 46.9
Ciclev10003224m.g Citrus clementina HOM05D000205 ORTHO05D000438 2.9e-06 55.5 41 68.3
CsaV3_1G039260 Cucumis sativus L. HOM05D000205 ORTHO05D000438 2.9e-06 55.5 64 46.9
Dinv40241 Davidia involucrata HOM05D000205 ORTHO05D000438 2.9e-06 55.5 40 67.5
Duzib138G0754 Durio zibethinus HOM05D000205 ORTHO05D000438 2.9e-06 55.5 42 64.3
ECA246G4999 Erigeron canadensis HOM05D000205 ORTHO05D000438 2.9e-06 55.5 38 68.4
Migut.B01284 Erythranthe guttata HOM05D000205 ORTHO05D000438 2.9e-06 55.5 62 48.4
Eucgr.H04438 Eucalyptus grandis HOM05D000205 ORTHO05D000438 2.9e-06 55.5 41 63.4
Hma1.2p1_3523F.1_g336540 Hydrangea macrophylla HOM05D000205 ORTHO05D013496 2.9e-06 55.5 47 57.4
PSO170G0534 Papaver somniferum HOM05D000205 ORTHO05D000438 2.9e-06 55.5 41 63.4
Potri.010G026500 Populus trichocarpa HOM05D000205 ORTHO05D000438 2.9e-06 55.5 42 61.9
QL03p004128 Quercus lobata HOM05D000205 ORTHO05D000438 2.9e-06 55.5 128 32.8
Rhsim02G0015000 Rhododendron simsii HOM05D000205 ORTHO05D000438 2.9e-06 55.5 90 36.7
SalBow5G2868 Salvia bowleyana HOM05D000205 ORTHO05D000438 2.9e-06 55.5 40 65.0
SalBow5G5334 Salvia bowleyana HOM05D000205 ORTHO05D000438 2.9e-06 55.5 40 65.0
TWI23G0936 Tripterygium wilfordii HOM05D000205 ORTHO05D000438 2.9e-06 55.5 44 61.4
TAR362G1334 Trochodendron aralioides HOM05D000205 ORTHO05D000438 2.9e-06 55.5 41 63.4
Atru.chr2.517 Acer truncatum HOM05D000205 ORTHO05D000438 3.7e-06 55.1 41 63.4
Eucgr.H03662 Eucalyptus grandis HOM05D000205 ORTHO05D000438 3.7e-06 55.1 42 61.9
Glyma.13G213200 Glycine max HOM05D000205 ORTHO05D000438 3.7e-06 55.1 86 39.5
HanXRQChr17g0539131 Helianthus annuus HOM05D000205 ORTHO05D000438 3.7e-06 55.1 86 44.2
Hma1.2p1_0666F.1_g199340 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 3.7e-06 55.1 41 58.5
MD12G1225800 Malus domestica HOM05D000205 ORTHO05D000438 3.7e-06 55.1 41 63.4
Potri.013G027500 Populus trichocarpa HOM05D000205 ORTHO05D000438 3.7e-06 55.1 41 61.0
Prupe.1G144800 Prunus persica HOM05D000205 ORTHO05D000438 3.7e-06 55.1 81 42.0
Thecc.01G286600 Theobroma cacao HOM05D000205 ORTHO05D000438 3.7e-06 55.1 41 65.9
GSVIVG01022022001 Vitis vinifera HOM05D000205 ORTHO05D000438 3.7e-06 55.1 80 38.8
CiPaw.01G155600 Carya illinoinensis HOM05D000205 ORTHO05D000438 4.9e-06 54.7 42 59.5
FAN17G0646 Fragaria x ananassa HOM05D000205 ORTHO05D000438 4.9e-06 54.7 81 42.0
FAN22G0961 Fragaria x ananassa HOM05D000205 ORTHO05D000438 4.9e-06 54.7 81 42.0
Manes.05G071400 Manihot esculenta HOM05D000205 ORTHO05D000438 4.9e-06 54.7 80 43.8
Sabra14G0103100 Salix brachista HOM05D000205 ORTHO05D000438 4.9e-06 54.7 80 38.8
BcaB04g21376 Brassica carinata HOM05D000205 ORTHO05D000438 6.4e-06 54.3 51 45.1
Eucgr.H04441 Eucalyptus grandis HOM05D000205 ORTHO05D000438 6.4e-06 54.3 41 58.5
Hma1.2p1_2318F.1_g319750 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 6.4e-06 54.3 42 61.9
PGR031G1752 Punica granatum HOM05D000205 ORTHO05D000438 6.4e-06 54.3 41 63.4
Rhsim05G0145500 Rhododendron simsii HOM05D000205 ORTHO05D000438 6.4e-06 54.3 76 43.4
Sc09g0003410 Simmondsia chinensis HOM05D000205 ORTHO05D000438 6.4e-06 54.3 40 65.0
SGA_v2.0_scaffold4G02516 Striga asiatica HOM05D000205 ORTHO05D000438 6.4e-06 54.3 40 62.5
TWI23G0531 Tripterygium wilfordii HOM05D000205 ORTHO05D000438 6.4e-06 54.3 44 59.1
Cfa006072 Carpinus fangiana HOM05D000205 ORTHO05D000438 8.3e-06 53.9 42 61.9
Ciclev10001032m.g Citrus clementina HOM05D000205 ORTHO05D000438 8.3e-06 53.9 41 61.0
Ciclev10001263m.g Citrus clementina HOM05D000205 ORTHO05D000438 8.3e-06 53.9 110 32.7
Ciclev10019918m.g Citrus clementina HOM05D000205 ORTHO05D000438 8.3e-06 53.9 42 61.9
COL.COLO4_13542 Corchorus olitorius HOM05D000205 ORTHO05D000438 8.3e-06 53.9 44 59.1
Duzib151G0693 Durio zibethinus HOM05D000205 ORTHO05D000438 8.3e-06 53.9 81 37.0
Eucgr.H04439 Eucalyptus grandis HOM05D000205 ORTHO05D000438 8.3e-06 53.9 41 56.1
FAN14G1503 Fragaria x ananassa HOM05D000205 ORTHO05D000438 8.3e-06 53.9 107 31.8
Glyma.03G241000 Glycine max HOM05D000205 ORTHO05D000438 8.3e-06 53.9 113 34.5
Gohir.A08G044600 Gossypium hirsutum HOM05D000205 ORTHO05D000438 8.3e-06 53.9 84 41.7
Oeu001447.1 Olea europaea HOM05D000784 ORTHO05D000116 8.3e-06 53.9 54 57.4
Oeu013218.1 Olea europaea HOM05D000205 ORTHO05D000438 8.3e-06 53.9 58 50.0
Phvul.006G095200 Phaseolus vulgaris HOM05D000205 ORTHO05D000438 8.3e-06 53.9 45 57.8
Sabra10G0013300 Salix brachista HOM05D000205 ORTHO05D000438 8.3e-06 53.9 42 59.5
SalBow5G1936 Salvia bowleyana HOM05D000205 ORTHO05D000438 8.3e-06 53.9 53 54.7
SEGI_29590 Sequoiadendron giganteum HOM05D000205 ORTHO05D000438 8.3e-06 53.9 85 37.6
Thecc.04G274200 Theobroma cacao HOM05D000205 ORTHO05D000438 8.3e-06 53.9 81 39.5
VMungo0540G2009 Vigna mungo HOM05D000205 ORTHO05D000438 8.3e-06 53.9 86 37.2


User provided reference genes

Program Settings