Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p002698 Quercus lobata HOM05D000439 ORTHO05D034941 8.1e-67 258.1 284 100.0
QL03p002736 Quercus lobata HOM05D000439 ORTHO05D002302 1.8e-21 107.5 103 59.2
QL07p015783 Quercus lobata HOM05D000439 ORTHO05D002302 1.1e-15 88.2 65 69.2
QL03p002724 Quercus lobata HOM05D000439 ORTHO05D002302 3.2e-15 86.7 65 70.8
AT5G27230 Arabidopsis thaliana HOM05D000439 ORTHO05D012413 1.6e-09 67.8 65 50.8
Carub.0006s2528 Capsella rubella HOM05D000439 ORTHO05D012413 3.5e-09 66.6 65 52.3
AL6G39860 Arabidopsis lyrata HOM05D000439 ORTHO05D012413 4.5e-09 66.2 76 46.1
Thhalv10005503m.g Eutrema salsugineum HOM05D000439 ORTHO05D012413 5.9e-09 65.9 65 50.8
BcaC04g23694 Brassica carinata HOM05D000439 ORTHO05D012413 2.9e-08 63.5 65 47.7
BraA09t36159Z Brassica rapa HOM05D000439 ORTHO05D012413 2.9e-08 63.5 65 47.7
Sp2g20480 Schrenkiella parvula HOM05D000439 ORTHO05D012413 2.9e-08 63.5 65 49.2
A09p05200 Brassica napus HOM05D000439 ORTHO05D012413 5.0e-08 62.8 65 46.2
Thecc.05G251400 Theobroma cacao HOM05D000439 ORTHO05D002302 6.5e-08 62.4 73 47.9
Prupe.6G334700 Prunus persica HOM05D000439 ORTHO05D002302 1.1e-07 61.6 73 46.6
BcaB04g19658 Brassica carinata HOM05D000439 ORTHO05D012413 1.5e-07 61.2 65 46.2
BolC9t53493H Brassica oleracea HOM05D000439 ORTHO05D012413 1.5e-07 61.2 65 46.2
Manes.09G160601 Manihot esculenta HOM05D000439 ORTHO05D002302 1.5e-07 61.2 66 48.5
Manes.09G160701 Manihot esculenta HOM05D000439 ORTHO05D002302 1.5e-07 61.2 59 50.8
C09p05650 Brassica napus HOM05D000439 ORTHO05D012413 1.9e-07 60.8 65 46.2
FAN14G5795 Fragaria x ananassa HOM05D000439 ORTHO05D002302 2.5e-07 60.5 66 48.5
Gohir.D11G246820 Gossypium hirsutum HOM05D000439 ORTHO05D002302 3.2e-07 60.1 65 49.2
Duzib177G0767 Durio zibethinus HOM05D000439 ORTHO05D002302 4.2e-07 59.7 66 53.0
FvH4_6g04380 Fragaria vesca HOM05D000439 ORTHO05D002302 4.2e-07 59.7 66 47.0
Gorai.007G262900 Gossypium raimondii HOM05D000439 ORTHO05D002302 5.5e-07 59.3 65 49.2
Sed0021572 Sechium edule HOM05D000439 ORTHO05D002302 5.5e-07 59.3 91 42.9
ClCG02G012450 Citrullus lanatus HOM05D000439 ORTHO05D002302 7.2e-07 58.9 85 42.4
Thecc.05G251700 Theobroma cacao HOM05D000439 ORTHO05D002302 7.2e-07 58.9 76 44.7
Gohir.D11G246880 Gossypium hirsutum HOM05D000160 ORTHO05D002302 9.4e-07 58.5 90 43.3
RcHm_v2.0_Chr3g0452971 Rosa chinensis HOM05D000439 ORTHO05D002302 9.4e-07 58.5 83 38.6
FAN05G1097 Fragaria x ananassa HOM05D004471 ORTHO05D005345 1.2e-06 58.2 65 43.1
FAN05G1628 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.2e-06 58.2 65 43.1
Gorai.007G263000 Gossypium raimondii HOM05D000439 ORTHO05D001363 1.2e-06 58.2 90 44.4
FvH4_6g04261 Fragaria vesca HOM05D000439 ORTHO05D002302 1.6e-06 57.8 65 43.1
FAN14G4802 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.6e-06 57.8 65 43.1
Gohir.D13G104000 Gossypium hirsutum HOM05D000439 ORTHO05D002302 1.6e-06 57.8 82 40.2
Gorai.013G116600 Gossypium raimondii HOM05D000439 ORTHO05D002302 1.6e-06 57.8 82 40.2
MELO3C020868.2 Cucumis melo HOM05D012224 ORTHO05D034941 2.1e-06 57.4 64 46.9
FAN09G1313 Fragaria x ananassa HOM05D004471 ORTHO05D005345 2.1e-06 57.4 65 43.1
FAN09G2224 Fragaria x ananassa HOM05D000439 ORTHO05D034941 2.1e-06 57.4 65 43.1
Sabra05G0041000 Salix brachista HOM05D000439 ORTHO05D002302 2.1e-06 57.4 77 41.6
MELO3C020867.2 Cucumis melo HOM05D000439 ORTHO05D002302 2.7e-06 57.0 65 46.2
C07p40550 Brassica napus HOM05D000439 ORTHO05D012413 3.6e-06 56.6 65 44.6
BolC7t44592H Brassica oleracea HOM05D000439 ORTHO05D012413 3.6e-06 56.6 65 44.6
Duzib106G1037 Durio zibethinus HOM05D000439 ORTHO05D002302 3.6e-06 56.6 66 42.4
TWI56G0175 Tripterygium wilfordii HOM05D000439 ORTHO05D002302 3.6e-06 56.6 61 45.9
Aa31LG11G8990 Aethionema arabicum HOM05D000439 ORTHO05D012413 6.1e-06 55.8 65 43.1
CARHR185840 Cardamine hirsuta HOM05D000439 ORTHO05D012413 6.1e-06 55.8 60 45.0
Ciclev10003673m.g Citrus clementina HOM05D000439 ORTHO05D002302 6.1e-06 55.8 77 42.9
CsaV3_2G016580 Cucumis sativus L. HOM05D000439 ORTHO05D002302 6.1e-06 55.8 70 41.4
Gohir.A13G100400 Gossypium hirsutum HOM05D000439 ORTHO05D002302 6.1e-06 55.8 82 40.2
TWI56G0825 Tripterygium wilfordii HOM05D000160 ORTHO05D000914 6.1e-06 55.8 46 63.0


User provided reference genes

Program Settings