Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 2.1e-166 589.0 298 100.0
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 3.0e-136 488.8 319 79.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 5.4e-130 468.0 270 87.4
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 3.5e-129 465.3 285 80.7
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 5.6e-127 458.0 260 86.9
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 4.7e-126 454.9 270 84.4
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.8e-125 453.0 297 76.1
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 1.8e-125 453.0 297 76.4
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.7e-123 446.4 278 80.6
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.1e-122 443.7 278 80.2
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 3.2e-122 442.2 268 80.6
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 3.5e-121 438.7 255 83.5
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 3.5e-121 438.7 288 78.5
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.3e-120 436.8 296 75.0
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.7e-120 436.4 281 76.5
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.3e-120 436.0 277 79.4
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 8.6e-120 434.1 255 82.7
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.1e-119 433.7 252 82.1
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.5e-119 433.3 268 79.1
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.5e-119 433.3 264 80.7
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 4.3e-119 431.8 276 78.6
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 4.3e-119 431.8 267 80.9
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 7.3e-119 431.0 254 83.1
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 9.6e-119 430.6 266 81.2
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 3.6e-118 428.7 285 75.8
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 4.7e-118 428.3 294 73.8
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 3.1e-117 425.6 260 80.8
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 5.2e-117 424.9 292 74.7
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 8.9e-117 424.1 297 71.7
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.2e-116 423.7 245 82.9
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 3.4e-116 422.2 253 83.0
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 9.9e-116 420.6 292 74.0
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.3e-115 420.2 261 78.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.2e-115 419.5 301 70.4
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 2.9e-115 419.1 273 76.6
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.8e-115 418.7 245 83.3
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 3.8e-115 418.7 295 71.2
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 4.9e-115 418.3 297 72.7
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 4.9e-115 418.3 260 79.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 8.4e-115 417.5 245 82.9
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 8.4e-115 417.5 243 83.5
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 8.4e-115 417.5 284 73.2
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 1.2e-113 413.7 257 80.9
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 2.1e-113 412.9 292 71.6
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 2.7e-113 412.5 267 76.4
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 2.7e-113 412.5 297 70.7
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 3.5e-113 412.1 297 70.0
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.8e-113 411.0 278 73.0
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 7.8e-113 411.0 297 70.4
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 1.0e-112 410.6 300 70.0
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.3e-112 410.2 266 76.3
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 5.1e-112 408.3 261 77.0
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.9e-111 406.4 293 71.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.9e-111 406.4 283 72.4
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.3e-111 405.6 299 71.2
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 9.6e-111 404.1 271 74.2
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 9.6e-111 404.1 271 74.2
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 9.6e-111 404.1 271 74.2
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 1.6e-110 403.3 291 70.8
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.1e-110 402.9 281 73.0
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 4.8e-110 401.7 267 76.0
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 4.8e-110 401.7 267 76.0
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 7.6e-108 394.4 228 84.2
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.4e-106 389.4 245 78.8
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.5e-105 385.6 263 74.5
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.3e-103 379.0 263 74.5
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 6.2e-102 374.8 252 74.2
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.1e-98 364.0 220 80.9
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.2e-98 362.1 219 79.5
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 5.5e-98 361.7 334 57.5
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 7.1e-98 361.3 231 77.9
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.6e-97 360.1 301 64.1
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.6e-97 360.1 209 80.9
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.1e-96 355.1 243 71.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.1e-95 354.0 205 83.4
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 1.8e-93 346.7 211 78.2
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 4.0e-93 345.5 213 80.3
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.6e-89 333.6 253 66.0
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 4.6e-89 332.0 224 71.4
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 1.0e-88 330.9 211 74.4
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.8e-86 322.0 194 78.9
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 2.4e-85 319.7 267 63.3
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 5.3e-85 318.5 275 60.7
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 9.3e-82 307.8 264 57.6
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 7.9e-81 304.7 216 72.7
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.3e-80 303.9 228 67.1
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 1.1e-79 300.8 166 84.3
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.8e-77 293.5 173 82.1
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.5e-76 290.4 271 55.0
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 5.0e-75 285.4 244 58.2
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.8e-72 276.9 228 62.3
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.2e-70 270.0 194 67.5
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 5.9e-68 261.9 177 71.8
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.8e-67 259.2 246 52.8
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 3.9e-64 249.2 218 61.0
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 8.8e-64 248.1 180 65.0
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.1e-63 247.7 227 53.3
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.1e-61 241.1 269 50.6
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.6e-57 227.3 167 68.9
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 3.6e-49 199.5 171 61.4
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.4e-45 187.6 240 46.7
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 2.7e-36 156.8 92 85.9
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.0e-32 144.8 92 79.3
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 2.0e-28 130.6 106 62.3
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.4e-24 117.9 98 52.0
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 4.9e-22 109.4 78 67.9
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 9.2e-21 105.1 138 45.7
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 3.5e-20 103.2 119 45.4
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 2.3e-19 100.5 57 84.2
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 6.6e-19 99.0 60 86.7
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.8e-16 90.9 98 45.9
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.9e-13 80.9 216 30.6
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 4.6e-12 76.3 51 74.5
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 2.3e-11 73.9 47 70.2
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 2.3e-11 73.9 41 78.0
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 2.0e-07 60.8 36 86.1
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 7.6e-07 58.9 54 55.6


User provided reference genes

Program Settings