Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.9e-286 988.4 479 100.0
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.1e-246 856.3 472 87.5
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 9.0e-228 793.5 469 80.2
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.1e-225 786.6 469 79.3
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.1e-225 786.6 469 79.7
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.9e-225 785.8 468 79.7
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 2.5e-225 785.4 469 79.5
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 4.2e-225 784.6 470 79.1
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 7.1e-225 783.9 469 79.5
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 9.3e-225 783.5 469 79.3
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.1e-224 782.3 473 78.9
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 1.8e-223 779.2 468 78.4
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 3.9e-223 778.1 471 78.1
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 8.7e-223 776.9 493 78.7
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.9e-222 775.8 464 78.4
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 9.7e-222 773.5 476 78.6
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 2.8e-221 771.9 481 76.9
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.8e-220 769.2 471 79.2
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 3.1e-220 768.5 476 80.0
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 2.6e-219 765.4 471 79.2
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 2.9e-218 761.9 473 77.4
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 4.2e-217 758.1 476 78.2
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 4.2e-217 758.1 470 76.4
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 7.9e-216 753.8 461 77.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.7e-210 736.1 464 74.8
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 1.1e-209 733.4 477 73.2
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.4e-209 733.0 480 74.2
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 7.9e-208 727.2 463 74.1
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 4.8e-205 718.0 469 72.7
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 9.1e-204 713.8 433 77.6
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 2.0e-203 712.6 467 73.2
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 4.2e-201 704.9 470 72.3
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 3.6e-200 701.8 465 70.5
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 8.0e-200 700.7 460 72.2
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.3e-199 699.1 470 71.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 2.3e-199 699.1 460 71.7
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 6.7e-199 697.6 465 70.8
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 6.7e-199 697.6 472 72.0
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.7e-199 697.6 461 71.8
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 8.8e-199 697.2 470 72.3
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 1.1e-198 696.8 470 71.1
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 1.1e-198 696.8 468 71.8
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 2.0e-198 696.0 471 69.4
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 2.0e-198 696.0 460 71.7
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 9.7e-198 693.7 429 76.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.1e-196 690.3 471 70.3
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 1.8e-196 689.5 458 71.0
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 2.4e-196 689.1 439 74.5
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 5.3e-196 688.0 467 70.2
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 5.3e-196 688.0 470 71.3
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 9.1e-196 687.2 469 71.4
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 1.6e-195 686.4 470 70.6
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 5.9e-195 684.5 470 71.7
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 7.7e-195 684.1 441 73.9
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 1.3e-194 683.3 429 75.5
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.9e-194 682.2 470 70.9
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 3.2e-193 678.7 471 71.1
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 3.2e-193 678.7 471 71.1
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 5.5e-193 677.9 471 70.9
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 5.5e-193 677.9 441 71.9
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 9.4e-193 677.2 469 70.4
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 6.1e-192 674.5 366 86.9
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.5e-190 669.8 393 79.9
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 2.0e-190 669.5 429 75.5
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 5.7e-190 667.9 478 67.4
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 7.5e-190 667.5 395 79.0
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.7e-189 666.4 458 68.8
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 3.7e-189 665.2 477 68.8
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 1.8e-188 662.9 462 68.6
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.5e-187 658.7 433 72.1
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 1.0e-186 657.1 500 65.8
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 1.7e-186 656.4 417 74.3
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.7e-186 656.4 387 78.8
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 2.9e-186 655.6 461 68.3
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 5.0e-186 654.8 369 82.1
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 6.5e-186 654.4 478 67.8
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.9e-185 652.9 494 63.8
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 1.6e-184 649.8 431 71.5
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.4e-183 646.7 442 69.0
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 4.0e-183 645.2 387 76.5
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.5e-182 643.3 451 69.2
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 1.1e-180 637.1 385 77.9
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.3e-178 629.4 396 75.3
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 1.6e-176 623.2 465 67.5
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 1.7e-173 613.2 455 64.2
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 3.9e-170 602.1 470 65.3
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 5.0e-170 601.7 416 68.8
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 5.6e-169 598.2 437 65.9
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.6e-168 595.5 335 85.1
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 5.0e-162 575.1 440 62.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 7.3e-161 571.2 468 59.0
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 8.1e-160 567.8 440 61.6
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 3.1e-159 565.8 462 61.3
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 3.6e-144 515.8 436 58.5
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 4.9e-141 505.4 371 63.3
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 5.4e-140 501.9 493 55.0
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.6e-115 419.1 313 65.2
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 6.3e-112 408.7 212 91.5
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 4.1e-103 379.4 259 74.9
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.6e-102 376.7 270 68.9
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 6.1e-99 365.5 457 43.8
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 2.8e-96 356.7 385 46.0
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 6.3e-96 355.5 223 77.6
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 9.7e-89 331.6 437 41.6
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.1e-79 301.6 260 63.8
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 4.1e-79 299.7 325 50.8
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 2.6e-73 280.4 275 51.6
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 8.3e-72 275.4 159 80.5
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 7.5e-65 252.3 155 77.4
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.4e-49 200.3 131 76.3
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 3.3e-44 183.7 128 68.0
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 5.4e-31 139.8 123 57.7
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 4.7e-27 126.7 77 75.3
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 8.9e-26 122.5 67 83.6
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 8.9e-26 122.5 81 74.1
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 6.6e-21 106.3 110 56.4
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 2.5e-20 104.4 102 54.9
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.8e-18 98.2 91 48.4
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 3.1e-18 97.4 130 46.2


User provided reference genes

Program Settings