Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 4.6e-55 217.6 108 100.0
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 4.6e-55 217.6 108 100.0
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.4e-27 126.3 63 90.5
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 4.1e-27 124.8 65 87.7
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.5e-26 122.9 63 90.5
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.6e-26 122.1 65 86.2
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 5.9e-26 120.9 63 87.3
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 5.0e-25 117.9 63 82.5
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 5.0e-25 117.9 63 82.5
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 5.0e-25 117.9 63 84.1
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 6.5e-25 117.5 63 85.7
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 6.5e-25 117.5 66 80.3
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.1e-24 116.7 63 84.1
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 1.4e-24 116.3 63 84.1
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.4e-24 116.3 63 85.7
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 5.5e-24 114.4 61 85.2
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 9.4e-24 113.6 63 81.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 9.4e-24 113.6 60 83.3
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 9.4e-24 113.6 65 76.9
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 1.2e-23 113.2 60 83.3
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.6e-23 112.8 63 84.1
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 4.7e-23 111.3 64 81.2
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 6.1e-23 110.9 60 80.0
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 6.1e-23 110.9 63 77.8
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 1.0e-22 110.2 60 81.7
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.8e-22 109.4 64 79.7
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 2.3e-22 109.0 57 86.0
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 3.9e-22 108.2 60 78.3
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 3.9e-22 108.2 63 77.8
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 6.7e-22 107.5 58 84.5
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 8.8e-22 107.1 63 76.2
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 8.8e-22 107.1 61 82.0
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.1e-21 106.7 63 76.2
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 3.3e-21 105.1 63 74.6
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 5.7e-21 104.4 61 78.7
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 7.4e-21 104.0 63 73.0
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 7.4e-21 104.0 63 73.0
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 7.4e-21 104.0 63 73.0
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 7.4e-21 104.0 57 82.5
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.3e-20 103.2 63 74.6
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.7e-20 102.8 57 82.5
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 2.8e-20 102.1 63 73.0
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 3.7e-20 101.7 63 74.6
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 3.7e-20 101.7 63 74.6
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 6.3e-20 100.9 60 80.0
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 6.3e-20 100.9 68 69.1
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 8.2e-20 100.5 63 73.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 8.2e-20 100.5 63 73.0
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 8.2e-20 100.5 63 73.0
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 1.1e-19 100.1 61 75.4
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 1.4e-19 99.8 73 67.1
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 6.9e-19 97.4 60 71.7
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 3.4e-18 95.1 60 70.0
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 1.1e-16 90.1 53 73.6
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 4.2e-16 88.2 61 70.5
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.6e-15 86.3 62 67.7
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 1.0e-14 83.6 58 63.8
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.4e-14 83.2 44 84.1
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 3.3e-13 78.6 59 66.1
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 7.4e-13 77.4 63 60.3
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 4.8e-12 74.7 53 60.4
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 1.4e-11 73.2 56 51.8
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 1.8e-11 72.8 69 58.0
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 9.1e-11 70.5 63 58.7
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 2.0e-10 69.3 36 86.1
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.0e-10 69.3 63 57.1
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 2.0e-10 69.3 63 57.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 2.0e-10 69.3 35 88.6
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 2.6e-10 68.9 63 57.1
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 1.3e-09 66.6 36 80.6
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 5.0e-09 64.7 72 47.2
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 6.5e-09 64.3 59 50.8
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 7.2e-08 60.8 32 84.4
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 1.6e-07 59.7 29 89.7
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 2.1e-07 59.3 29 86.2
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 2.7e-07 58.9 29 86.2
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 8.0e-07 57.4 29 82.8
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 8.8e-06 53.9 29 75.9


User provided reference genes

Program Settings