Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 8.8e-209 730.3 448 100.0
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 1.6e-165 586.6 442 74.4
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 1.5e-155 553.5 351 84.6
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 1.7e-148 530.0 547 60.7
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 3.2e-134 482.6 447 59.7
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 9.3e-134 481.1 445 59.1
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.2e-133 480.7 447 61.1
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 7.8e-133 478.0 444 58.8
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 7.3e-131 471.5 444 63.3
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 1.4e-129 467.2 438 63.5
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 2.4e-129 466.5 440 57.5
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 1.2e-128 464.2 440 57.3
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 2.4e-126 456.4 351 67.8
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 3.5e-125 452.6 439 56.7
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 7.9e-125 451.4 438 58.2
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 8.7e-124 448.0 480 54.2
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 1.9e-123 446.8 438 58.4
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.6e-123 445.3 427 58.3
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 9.6e-123 444.5 435 57.0
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 1.3e-122 444.1 444 54.5
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.8e-122 443.0 438 56.6
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 8.4e-119 431.4 434 60.8
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 2.5e-118 429.9 441 60.5
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 3.2e-118 429.5 434 60.6
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 3.5e-117 426.0 351 65.0
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 1.3e-116 424.1 348 65.5
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 3.9e-116 422.5 438 59.4
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 5.6e-115 418.7 435 57.0
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 5.6e-115 418.7 440 53.0
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 2.8e-114 416.4 440 53.6
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 2.8e-114 416.4 433 53.1
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 1.2e-112 411.0 444 56.8
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 2.6e-112 409.8 440 52.0
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 4.5e-112 409.1 444 59.9
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 8.4e-111 404.8 439 50.3
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 2.5e-110 403.3 442 51.8
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 2.5e-110 403.3 438 57.8
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 4.2e-110 402.5 438 56.4
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 7.1e-110 401.7 438 56.2
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 4.6e-109 399.1 460 49.6
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 6.0e-109 398.7 351 61.3
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 8.7e-108 394.8 447 55.3
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 1.9e-107 393.7 438 49.1
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 2.5e-107 393.3 426 49.5
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 2.4e-105 386.7 444 51.1
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 9.0e-105 384.8 295 68.5
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 2.6e-104 383.3 439 46.7
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 3.4e-104 382.9 438 54.3
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 7.7e-104 381.7 439 47.8
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 3.8e-103 379.4 439 48.1
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 8.5e-103 378.3 444 45.3
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 1.4e-102 377.5 436 51.4
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 2.5e-102 376.7 439 50.3
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 3.2e-102 376.3 445 50.3
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 3.2e-102 376.3 426 49.5
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 7.2e-102 375.2 426 49.3
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 2.1e-101 373.6 447 56.6
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.6e-101 372.5 438 50.5
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.3e-100 370.2 440 49.3
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 5.1e-100 369.0 448 46.4
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 5.1e-100 369.0 443 46.3
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 6.7e-100 368.6 592 41.7
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 7.4e-99 365.2 304 63.8
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 4.8e-98 362.5 444 46.6
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 8.2e-98 361.7 446 46.0
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 2.4e-97 360.1 438 52.1
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 3.1e-97 359.8 448 46.4
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 4.1e-97 359.4 444 49.1
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 1.2e-96 357.8 447 50.6
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 2.0e-96 357.1 455 44.4
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 1.0e-95 354.8 455 43.7
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 1.0e-95 354.8 455 43.7
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 1.7e-95 354.0 438 50.7
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 5.0e-95 352.4 433 47.8
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 9.4e-94 348.2 444 52.0
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 2.7e-93 346.7 433 47.1
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 4.7e-93 345.9 497 42.3
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 6.1e-93 345.5 446 46.2
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.0e-92 344.7 436 46.8
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.8e-92 344.0 349 55.3
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 2.3e-92 343.6 440 48.9
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 3.9e-92 342.8 460 49.8
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 5.1e-92 342.4 437 52.9
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 6.7e-92 342.0 442 44.3
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 2.0e-91 340.5 346 64.7
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 2.6e-91 340.1 357 52.7
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.6e-91 340.1 446 52.5
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 4.4e-91 339.3 442 46.8
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 4.4e-91 339.3 432 49.3
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 6.3e-90 335.5 465 47.7
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 5.3e-89 332.4 351 49.9
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 2.6e-88 330.1 440 45.0
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 2.9e-87 326.6 438 43.6
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 5.0e-87 325.9 417 46.5
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 1.1e-86 324.7 438 44.5
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 3.2e-86 323.2 464 42.0
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.2e-85 321.2 438 44.3
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 1.6e-85 320.9 445 44.9
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 8.0e-85 318.5 442 43.2
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 5.2e-84 315.8 249 64.3
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 8.8e-84 315.1 346 50.9
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 3.3e-83 313.2 346 50.9
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.4e-81 307.8 440 43.0
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 5.3e-81 305.8 417 48.7
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 3.5e-80 303.1 457 41.8
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 8.0e-77 292.0 326 50.0
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.4e-76 291.2 417 42.9
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 5.2e-76 289.3 288 55.2
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 2.0e-75 287.3 448 45.3
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 9.1e-65 251.9 312 45.5
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 9.1e-65 251.9 361 43.2
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 1.7e-63 247.7 445 35.5
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 3.8e-63 246.5 222 59.0
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 2.6e-59 233.8 344 44.8
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 5.7e-59 232.6 229 54.1
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.7e-59 232.6 413 39.2
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 1.3e-58 231.5 301 45.8
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 3.2e-57 226.9 611 30.3
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 7.0e-57 225.7 206 56.3
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 1.7e-55 221.1 307 42.7
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 3.9e-55 219.9 325 40.0
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 6.1e-53 212.6 438 35.2
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.5e-51 208.0 325 38.2
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 7.5e-51 205.7 212 57.5
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 4.6e-48 196.4 226 51.8
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 1.2e-43 181.8 207 44.9
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 2.0e-43 181.0 341 35.2
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 5.6e-38 162.9 346 34.7
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 1.8e-36 157.9 165 53.9
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 9.9e-35 152.1 205 42.0
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 6.0e-32 142.9 352 30.4
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 6.6e-31 139.4 173 49.1
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 1.3e-26 125.2 250 32.8
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.1e-25 122.1 426 28.2
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 1.2e-24 118.6 200 42.0
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 5.1e-23 113.2 100 54.0
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.5e-22 111.7 118 51.7
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 3.3e-22 110.5 82 70.7
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 6.9e-20 102.8 146 44.5
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.0e-19 101.3 80 57.5
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 2.0e-19 101.3 74 73.0
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 4.4e-19 100.1 187 36.9
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 2.5e-14 84.3 152 37.5
TPR.G18400 Trifolium pratense HOM05D004546 ORTHO05D005419 3.6e-13 80.5 66 62.1
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 8.1e-13 79.3 62 67.7
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 9.0e-12 75.9 145 37.2
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 1.1e-09 68.9 201 29.4
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 1.9e-09 68.2 87 37.9
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 3.2e-09 67.4 140 36.4
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.8e-07 61.6 43 74.4
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 3.0e-07 60.8 343 23.6
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 3.3e-06 57.4 155 26.5
PRCOL_00002550 Prasinoderma coloniale HOM05D004546 ORTHO05D005419 9.6e-06 55.8 186 26.9


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