Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p097844 Quercus lobata HOM05D007262 ORTHO05D008524 1.6e-101 372.9 196 100.0
CiPaw.08G035800 Carya illinoinensis HOM05D007262 ORTHO05D008524 2.2e-18 96.7 197 42.6
Gorai.013G246500 Gossypium raimondii HOM05D007262 ORTHO05D008524 7.2e-14 81.6 150 38.0
Thecc.09G176800 Theobroma cacao HOM05D007262 ORTHO05D008524 7.2e-14 81.6 142 40.1
Gohir.A13G212100 Gossypium hirsutum HOM05D007262 ORTHO05D008524 9.4e-14 81.3 150 38.0
Prupe.1G085200 Prunus persica HOM05D007262 ORTHO05D008524 1.2e-13 80.9 138 39.1
Sabra18G0079000 Salix brachista HOM05D007262 ORTHO05D008524 1.2e-13 80.9 149 33.6
Gohir.D13G216200 Gossypium hirsutum HOM05D007262 ORTHO05D008524 1.6e-13 80.5 136 39.0
RcHm_v2.0_Chr4g0402361 Rosa chinensis HOM05D007262 ORTHO05D008524 3.6e-13 79.3 135 39.3
COL.COLO4_37717 Corchorus olitorius HOM05D007262 ORTHO05D008524 3.0e-12 76.3 141 35.5
Potri.006G167300 Populus trichocarpa HOM05D007262 ORTHO05D008524 6.7e-12 75.1 106 40.6
Sabra06G0129200 Salix brachista HOM05D007262 ORTHO05D008524 8.8e-12 74.7 150 34.0
Dinv41243 Davidia involucrata HOM05D007262 ORTHO05D008524 1.5e-11 73.9 147 34.7
Potri.018G091900 Populus trichocarpa HOM05D007262 ORTHO05D008524 1.5e-11 73.9 102 37.3
Nitab4.5_0012916g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 1.3e-10 70.9 138 36.2
CiPaw.07G192600 Carya illinoinensis HOM05D007262 ORTHO05D008524 3.7e-10 69.3 124 41.9
Hma1.2p1_1025F.1_g249350 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 3.7e-10 69.3 150 35.3
MD13G1252900 Malus domestica HOM05D007262 ORTHO05D008524 4.8e-10 68.9 154 35.1
Ciclev10010707m.g Citrus clementina HOM05D007262 ORTHO05D008524 6.3e-10 68.6 160 35.6
DCAR_009916 Daucus carota HOM05D007262 ORTHO05D008524 6.3e-10 68.6 155 32.9
Lsat_1_v5_gn_7_54640 Lactuca sativa HOM05D007262 ORTHO05D008524 6.3e-10 68.6 99 44.4
TWI34G1693 Tripterygium wilfordii HOM05D007262 ORTHO05D008524 6.3e-10 68.6 58 55.2
Prupe.1G085100 Prunus persica HOM05D015664 ORTHO05D008524 1.1e-09 67.8 217 33.2
TAR383G0997 Trochodendron aralioides HOM05D007262 ORTHO05D008524 2.4e-09 66.6 145 37.9
VMungo1215G2644 Vigna mungo HOM05D007262 ORTHO05D008524 2.4e-09 66.6 135 40.7
Haze_22091 Corylus avellana HOM05D007262 ORTHO05D008524 3.1e-09 66.2 139 33.8
Rhsim01G0003900 Rhododendron simsii HOM05D000138 ORTHO05D000078 4.1e-09 65.9 98 37.8
Atru.chr7.612 Acer truncatum HOM05D007262 ORTHO05D008524 9.1e-09 64.7 100 37.0
CSS0001479 Camellia sinensis var. sinensis HOM05D007262 ORTHO05D008524 9.1e-09 64.7 182 28.0
Lalb_Chr07g0180511 Lupinus albus HOM05D007262 ORTHO05D008524 9.1e-09 64.7 95 41.1
MD16G1257400 Malus domestica HOM05D007262 ORTHO05D008524 1.2e-08 64.3 147 34.0
Nitab4.5_0007075g0010 Nicotiana tabacum HOM05D007262 ORTHO05D008524 1.2e-08 64.3 137 33.6
Phvul.003G145250 Phaseolus vulgaris HOM05D007262 ORTHO05D008524 2.0e-08 63.5 139 37.4
HanXRQChr11g0322411 Helianthus annuus HOM05D007262 ORTHO05D008524 2.6e-08 63.2 155 32.9
Medtr4g127960 Medicago truncatula HOM05D007262 ORTHO05D008524 2.6e-08 63.2 98 41.8
Glyma.17G062800 Glycine max HOM05D007262 ORTHO05D008524 3.4e-08 62.8 138 39.9
CiPaw.08G035900 Carya illinoinensis HOM05D007262 ORTHO05D008524 5.9e-08 62.0 135 34.1
MELO3C004021.2 Cucumis melo HOM05D007262 ORTHO05D008524 5.9e-08 62.0 138 34.1
Hma1.2p1_0900F.1_g234550 Hydrangea macrophylla HOM05D007262 ORTHO05D008524 7.7e-08 61.6 150 34.7
arahy.Tifrunner.gnm1.ann1.7KD434 Arachis hypogaea HOM05D007262 ORTHO05D008524 1.3e-07 60.8 65 49.2
CANSAT11G0589 Cannabis sativa HOM05D007262 ORTHO05D008524 1.7e-07 60.5 129 34.9
ClCG06G013380 Citrullus lanatus HOM05D015664 ORTHO05D008524 2.2e-07 60.1 189 30.2
Glyma.13G096700 Glycine max HOM05D007262 ORTHO05D008524 2.2e-07 60.1 141 39.7
Nn8g40468 Nelumbo nucifera HOM05D007262 ORTHO05D008524 2.2e-07 60.1 159 31.4
Ca_21230_v3 Cicer arietinum L. HOM05D007262 ORTHO05D008524 3.8e-07 59.3 92 38.0
SalBow6G4300 Salvia bowleyana HOM05D007262 ORTHO05D008524 3.8e-07 59.3 113 38.1
EL10Ac8g18288 Beta vulgaris HOM05D023972 ORTHO05D008524 5.0e-07 58.9 99 36.4
COL.COLO4_37718 Corchorus olitorius HOM05D018436 ORTHO05D008524 5.0e-07 58.9 76 43.4
Cfa013501 Carpinus fangiana HOM05D007262 ORTHO05D008524 8.5e-07 58.2 143 33.6
Manes.14G154200 Manihot esculenta HOM05D007262 ORTHO05D008524 8.5e-07 58.2 152 32.2
ClCG11G012130 Citrullus lanatus HOM05D007262 ORTHO05D008524 1.1e-06 57.8 133 33.8
CsaV3_1G031630 Cucumis sativus L. HOM05D015664 ORTHO05D008524 1.1e-06 57.8 101 39.6
THA.LOC104811785 Tarenaya hassleriana HOM05D007262 ORTHO05D008524 1.1e-06 57.8 183 28.4
Thecc.09G176700 Theobroma cacao HOM05D018436 ORTHO05D025173 1.1e-06 57.8 128 29.7
BcaC03g14155 Brassica carinata HOM05D007262 ORTHO05D008524 1.4e-06 57.4 102 39.2
C02p14260 Brassica napus HOM05D007262 ORTHO05D008524 1.4e-06 57.4 120 35.8
BolC2t07550H Brassica oleracea HOM05D007262 ORTHO05D008524 1.4e-06 57.4 120 35.8
Sabra18G0078900 Salix brachista HOM05D007262 ORTHO05D008524 1.4e-06 57.4 130 35.4
CsaV3_2G008430 Cucumis sativus L. HOM05D007262 ORTHO05D008524 1.9e-06 57.0 137 32.1
BcaB05g22344 Brassica carinata HOM05D007262 ORTHO05D008524 2.5e-06 56.6 109 39.4
MELO3C017459.2 Cucumis melo HOM05D015664 ORTHO05D008524 3.2e-06 56.2 189 32.8
CsaV3_1G031620 Cucumis sativus L. HOM05D007262 ORTHO05D008524 3.2e-06 56.2 76 42.1
A02p08490 Brassica napus HOM05D007262 ORTHO05D008524 4.2e-06 55.8 120 35.0
BraA02t05922Z Brassica rapa HOM05D007262 ORTHO05D008524 4.2e-06 55.8 120 35.0
MBI16_g25207_MAGBIO Magnolia biondii HOM05D007262 ORTHO05D008524 4.2e-06 55.8 75 38.7
Peaxi162Scf00231g00727 Petunia axillaris HOM05D007262 ORTHO05D008524 4.2e-06 55.8 103 34.0
PGR044G1778 Punica granatum HOM05D007262 ORTHO05D008524 5.5e-06 55.5 121 33.9
Lj4g0007156 Lotus japonicus HOM05D007262 ORTHO05D008524 9.4e-06 54.7 125 35.2


User provided reference genes

Program Settings