Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 1.6e-42 175.6 88 100.0
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 7.9e-37 156.8 88 88.6
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 4.8e-34 147.5 89 83.1
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 6.2e-34 147.1 86 82.6
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 5.3e-33 144.1 89 78.7
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 9.0e-33 143.3 86 81.4
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 1.2e-32 142.9 86 81.4
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 1.5e-32 142.5 86 80.2
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 2.0e-32 142.1 89 77.5
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 2.6e-32 141.7 86 80.2
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 4.5e-32 141.0 89 79.8
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 7.6e-32 140.2 89 76.4
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 7.6e-32 140.2 89 75.3
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 9.9e-32 139.8 89 76.4
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 89 76.4
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 1.3e-31 139.4 86 79.1
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 1.7e-31 139.0 86 79.1
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 75.3
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 75.3
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 75.3
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 76.4
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 77.5
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 1.7e-31 139.0 86 79.1
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 2.2e-31 138.7 86 77.9
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 2.2e-31 138.7 86 80.2
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.9e-31 138.3 89 75.3
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 3.8e-31 137.9 86 76.7
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 3.8e-31 137.9 86 76.7
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 3.8e-31 137.9 89 74.2
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 4.9e-31 137.5 87 77.0
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 8.4e-31 136.7 89 77.5
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 8.4e-31 136.7 89 76.4
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 8.4e-31 136.7 89 76.4
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.1e-30 136.3 89 74.2
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.1e-30 136.3 86 76.7
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 1.1e-30 136.3 86 77.9
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.4e-30 136.0 89 74.2
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.4e-30 136.0 89 75.3
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.4e-30 136.0 86 77.9
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.4e-30 136.0 86 74.4
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.9e-30 135.6 86 77.9
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 76.7
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 2.5e-30 135.2 89 74.2
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 2.5e-30 135.2 89 74.2
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 74.4
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 3.2e-30 134.8 89 73.0
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 4.2e-30 134.4 89 75.3
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 7.1e-30 133.7 89 75.3
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 7.1e-30 133.7 89 75.3
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 9.3e-30 133.3 89 74.2
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 9.3e-30 133.3 86 76.7
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 9.3e-30 133.3 86 74.4
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 9.3e-30 133.3 89 73.0
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.6e-29 132.5 96 71.9
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.6e-29 132.5 86 74.4
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.6e-29 132.5 86 74.4
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 2.7e-29 131.7 86 72.1
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 2.7e-29 131.7 85 75.3
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 3.5e-29 131.3 89 73.0
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 4.6e-29 131.0 86 72.1
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 4.6e-29 131.0 89 71.9
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 4.6e-29 131.0 86 74.4
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 4.6e-29 131.0 86 75.6
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 6.0e-29 130.6 86 72.1
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 7.9e-29 130.2 86 72.1
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 7.9e-29 130.2 86 70.9
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 7.9e-29 130.2 89 70.8
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 7.9e-29 130.2 89 74.2
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.0e-28 129.8 90 74.4
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.0e-28 129.8 90 74.4
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 1.3e-28 129.4 89 73.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 1.3e-28 129.4 86 74.4
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.3e-28 129.4 88 71.6
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 1.8e-28 129.0 89 73.0
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.8e-28 129.0 86 72.1
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.8e-28 129.0 86 72.1
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 73.3
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 2.3e-28 128.6 89 71.9
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 2.3e-28 128.6 86 75.6
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 3.0e-28 128.3 84 73.8
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 3.9e-28 127.9 99 65.7
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 6.7e-28 127.1 89 71.9
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 6.7e-28 127.1 89 70.8
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 6.7e-28 127.1 86 73.3
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 8.7e-28 126.7 89 66.3
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.5e-27 125.9 86 70.9
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.5e-27 125.9 86 67.4
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.5e-27 125.2 89 68.5
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 4.3e-27 124.4 89 69.7
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 4.3e-27 124.4 89 69.7
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 7.4e-27 123.6 86 68.6
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 9.6e-27 123.2 89 67.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 1.3e-26 122.9 89 68.5
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 6.2e-26 120.6 93 67.7
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 6.2e-26 120.6 86 70.9
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 8.2e-26 120.2 84 70.2
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 4.0e-25 117.9 123 53.7
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 6.9e-25 117.1 87 66.7
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 1.5e-24 115.9 76 71.1
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.2e-23 112.1 88 67.0
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.9e-23 111.7 88 65.9
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 3.8e-23 111.3 93 62.4
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 1.4e-22 109.4 70 72.9
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 1.2e-21 106.3 70 70.0
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.2e-21 106.3 65 80.0
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 2.1e-21 105.5 62 79.0
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.1e-21 105.5 69 71.0
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 6.1e-21 104.0 70 71.4
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 1.3e-20 102.8 79 64.6
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.3e-20 102.8 71 70.4
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.3e-20 102.1 53 88.7
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.1e-19 99.8 63 76.2
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 2.5e-19 98.6 69 68.1
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.6e-18 95.9 54 81.5
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 2.2e-18 95.5 60 76.7
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 9.0e-17 90.1 50 86.0
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.5e-16 89.4 91 54.9
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.2e-15 85.5 77 59.7
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 6.5e-15 84.0 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 7.9e-13 77.0 89 48.3
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 2.0e-11 72.4 92 45.7
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 3.3e-11 71.6 53 69.8
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.7e-08 60.5 46 63.0


User provided reference genes

Program Settings