Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p096270 Quercus lobata HOM05D003653 ORTHO05D004249 9.4e-113 410.2 209 100.0
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 7.1e-52 208.0 149 79.2
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 6.0e-51 204.9 140 81.4
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 1.2e-46 190.7 149 70.5
Haze_06171 Corylus avellana HOM05D003653 ORTHO05D004249 2.0e-46 189.9 137 75.2
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 3.8e-45 185.7 149 67.8
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 6.4e-45 184.9 133 74.4
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 1.6e-43 180.3 134 72.4
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 2.1e-43 179.9 144 69.4
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 2.1e-43 179.9 134 71.6
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 7.8e-43 177.9 137 71.5
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 2.3e-42 176.4 149 66.4
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 2.3e-42 176.4 149 67.1
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 3.0e-42 176.0 148 68.9
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 3.9e-42 175.6 149 66.4
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 5.1e-42 175.3 149 67.1
CSS0010075 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 2.5e-41 172.9 148 64.9
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 4.3e-41 172.2 137 68.6
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 5.6e-41 171.8 149 63.8
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 9.6e-41 171.0 148 64.9
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 1.3e-40 170.6 149 63.8
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.1e-40 169.9 136 69.1
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 3.6e-40 169.1 148 63.5
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 6.2e-40 168.3 134 70.1
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 8.1e-40 167.9 149 64.4
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 1.1e-39 167.5 148 64.2
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 1.8e-39 166.8 149 63.1
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 1.8e-39 166.8 148 64.2
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 2.4e-39 166.4 149 62.4
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 2.4e-39 166.4 148 64.2
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 3.1e-39 166.0 148 64.2
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 4.0e-39 165.6 149 62.4
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 6.9e-39 164.9 148 62.8
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 6.9e-39 164.9 148 63.5
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 1.5e-38 163.7 117 76.9
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 2.0e-38 163.3 137 65.7
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 2.0e-38 163.3 140 64.3
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 2.0e-38 163.3 149 61.1
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.0e-38 163.3 137 65.0
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.0e-38 163.3 149 61.7
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 2.0e-38 163.3 149 61.7
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 2.6e-38 162.9 133 67.7
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 2.6e-38 162.9 133 67.7
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 2.6e-38 162.9 151 61.6
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 3.4e-38 162.5 148 62.8
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 4.4e-38 162.2 148 62.8
Actinidia26999 Actinidia chinensis HOM05D003653 ORTHO05D004249 5.8e-38 161.8 122 71.3
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 5.8e-38 161.8 149 63.1
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.8e-38 161.8 149 63.1
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.8e-38 161.8 149 63.1
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.8e-38 161.8 149 63.1
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 5.8e-38 161.8 148 62.8
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 9.9e-38 161.0 149 63.1
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 9.9e-38 161.0 149 63.1
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 1.7e-37 160.2 133 66.2
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 2.9e-37 159.5 148 62.2
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 3.8e-37 159.1 133 65.4
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 3.8e-37 159.1 133 65.4
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 3.8e-37 159.1 133 66.2
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 4.9e-37 158.7 133 64.7
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 4.9e-37 158.7 149 60.4
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 4.9e-37 158.7 136 64.7
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 4.9e-37 158.7 149 59.7
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 6.4e-37 158.3 133 65.4
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 6.4e-37 158.3 149 61.1
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 8.4e-37 157.9 148 60.8
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 8.4e-37 157.9 148 60.8
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 8.4e-37 157.9 133 62.4
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 8.4e-37 157.9 149 59.7
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 8.4e-37 157.9 133 65.4
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 8.4e-37 157.9 134 64.2
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.1e-36 157.5 149 59.7
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 1.1e-36 157.5 137 63.5
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 1.1e-36 157.5 149 62.4
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 1.1e-36 157.5 148 60.1
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 3.2e-36 156.0 133 63.9
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 3.2e-36 156.0 140 62.9
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 4.2e-36 155.6 140 62.9
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 4.2e-36 155.6 149 61.1
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 4.2e-36 155.6 136 64.0
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 5.4e-36 155.2 148 61.5
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 7.1e-36 154.8 134 64.9
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 9.3e-36 154.5 134 62.7
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 9.3e-36 154.5 134 64.2
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 2.7e-35 152.9 144 61.8
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 7.8e-35 151.4 134 63.4
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.0e-34 151.0 137 59.9
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 1.3e-34 150.6 133 61.7
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 1.7e-34 150.2 134 63.4
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 2.3e-34 149.8 149 59.1
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 3.0e-34 149.4 134 61.9
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 3.9e-34 149.1 134 62.7
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 3.9e-34 149.1 149 57.0
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 3.9e-34 149.1 134 60.4
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 3.9e-34 149.1 134 60.4
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 6.6e-34 148.3 134 59.7
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 8.7e-34 147.9 134 62.7
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 8.7e-34 147.9 134 60.4
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 1.1e-33 147.5 149 55.7
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 2.5e-33 146.4 126 62.7
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 2.5e-33 146.4 133 60.9
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.3e-32 144.1 134 61.2
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 1.3e-32 144.1 134 58.2
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 1.3e-32 144.1 123 62.6
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 1.3e-32 144.1 126 62.7
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 1.3e-32 144.1 126 62.7
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 2.1e-32 143.3 141 58.9
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 6.2e-32 141.7 134 57.5
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 1.4e-31 140.6 126 60.3
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 5.3e-31 138.7 98 76.5
Haze_19192 Corylus avellana HOM05D003653 ORTHO05D004249 7.1e-28 128.3 82 85.4
SEGI_01409 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.1e-25 120.9 113 59.3
Haze_16166 Corylus avellana HOM05D003653 ORTHO05D004249 1.9e-25 120.2 76 85.5
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 3.3e-25 119.4 133 53.4
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 2.1e-24 116.7 133 52.6
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 2.1e-24 116.7 133 52.6
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 3.4e-22 109.4 143 48.3
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 1.3e-21 107.5 134 44.8
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.3e-21 107.5 134 45.5
Oeu030621.1 Olea europaea HOM05D003653 ORTHO05D004249 2.9e-21 106.3 80 70.0
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 3.8e-21 105.9 134 44.8
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 4.9e-21 105.5 228 36.8
Gohir.D13G136950 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.1e-20 104.4 80 66.2
Gorai.013G153500 Gossypium raimondii HOM05D003653 ORTHO05D004249 5.5e-20 102.1 98 56.1
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 2.7e-19 99.8 96 58.3
CAN.G12730.1 Capsicum annuum HOM05D003653 ORTHO05D004249 7.9e-19 98.2 81 67.9
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 7.9e-19 98.2 133 45.1
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 2.3e-18 96.7 137 47.4
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 5.3e-15 85.5 79 54.4
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 1.2e-14 84.3 126 41.3
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 5.1e-10 68.9 94 43.6
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 1.3e-08 64.3 119 32.8
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 4.8e-08 62.4 63 55.6
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 1.1e-07 61.2 65 52.3
Nitab4.5_0000055g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 4.1e-07 59.3 78 48.7
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 5.3e-07 58.9 78 46.2
VMungo1215G0910 Vigna mungo HOM05D003653 ORTHO05D004249 1.2e-06 57.8 43 67.4


User provided reference genes

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