Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p094831 Quercus lobata HOM05D000013 ORTHO05D015669 2.3e-82 308.9 163 100.0
QL04p082006 Quercus lobata HOM05D000013 ORTHO05D000011 3.6e-43 178.7 111 73.0
QL04p082208 Quercus lobata HOM05D000013 ORTHO05D000011 8.3e-24 114.4 105 49.5
QL04p082093 Quercus lobata HOM05D000013 ORTHO05D000011 7.8e-22 107.8 97 48.5
QL04p081038 Quercus lobata HOM05D000013 ORTHO05D000011 2.8e-19 99.4 110 45.5
QL04p082312 Quercus lobata HOM05D000013 ORTHO05D000011 1.8e-18 96.7 121 39.7
Prupe.4G134900 Prunus persica HOM05D000013 ORTHO05D000011 2.0e-17 93.2 108 42.6
FvH4_3g15091 Fragaria vesca HOM05D000013 ORTHO05D015669 1.7e-16 90.1 102 39.2
QL04p082421 Quercus lobata HOM05D000013 ORTHO05D000011 2.9e-16 89.4 98 41.8
QL08p040547 Quercus lobata HOM05D000013 ORTHO05D000011 8.3e-16 87.8 103 41.7
RcHm_v2.0_Chr5g0025051 Rosa chinensis HOM05D000013 ORTHO05D000011 1.4e-15 87.0 102 37.3
QL04p083101 Quercus lobata HOM05D000013 ORTHO05D000011 4.1e-15 85.5 106 39.6
RcHm_v2.0_Chr5g0024901 Rosa chinensis HOM05D000013 ORTHO05D000011 6.0e-14 81.6 104 37.5
FAN16G3392 Fragaria x ananassa HOM05D000013 ORTHO05D000011 7.8e-14 81.3 107 38.3
RcHm_v2.0_Chr5g0024871 Rosa chinensis HOM05D000013 ORTHO05D000011 7.8e-14 81.3 107 39.3
QL04p081983 Quercus lobata HOM05D000013 ORTHO05D000011 1.0e-13 80.9 102 39.2
RcHm_v2.0_Chr5g0025031 Rosa chinensis HOM05D000013 ORTHO05D000011 1.0e-13 80.9 113 35.4
RcHm_v2.0_Chr5g0024921 Rosa chinensis HOM05D000013 ORTHO05D000011 1.7e-13 80.1 104 37.5
RcHm_v2.0_Chr4g0410521 Rosa chinensis HOM05D000013 ORTHO05D000011 2.3e-13 79.7 103 36.9
RcHm_v2.0_Chr5g0024971 Rosa chinensis HOM05D000013 ORTHO05D000011 2.3e-13 79.7 107 39.3
QL04p082408 Quercus lobata HOM05D000013 ORTHO05D000011 3.0e-13 79.3 102 41.2
RcHm_v2.0_Chr5g0024951 Rosa chinensis HOM05D000013 ORTHO05D000011 3.0e-13 79.3 104 37.5
QL04p081930 Quercus lobata HOM05D000013 ORTHO05D000011 3.9e-13 79.0 104 38.5
RcHm_v2.0_Chr5g0025201 Rosa chinensis HOM05D000013 ORTHO05D000011 8.6e-13 77.8 90 38.9
MD10G1208000 Malus domestica HOM05D000013 ORTHO05D000011 1.1e-12 77.4 99 40.4
QL03p071098 Quercus lobata HOM05D000013 ORTHO05D000011 1.1e-12 77.4 103 38.8
FAN11G3251 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.5e-12 76.3 107 36.4
Lj5A257T14 Lonicera japonica HOM05D000013 ORTHO05D000011 2.5e-12 76.3 102 37.3
Lj5A259T16 Lonicera japonica HOM05D000013 ORTHO05D000011 2.5e-12 76.3 102 37.3
Peaxi162Scf00408g00242 Petunia axillaris HOM05D000013 ORTHO05D000011 3.3e-12 75.9 104 35.6
Prupe.4G135100 Prunus persica HOM05D000013 ORTHO05D000011 7.3e-12 74.7 92 42.4
MD10G1207500 Malus domestica HOM05D000013 ORTHO05D000011 1.1e-10 70.9 94 38.3
Phvul.011G175301 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 2.3e-10 69.7 109 41.3
CSS0010090 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 8.9e-10 67.8 93 39.8
Ciclev10020341m.g Citrus clementina HOM05D000013 ORTHO05D000011 8.9e-10 67.8 108 31.5
ECA240G1121 Erigeron canadensis HOM05D000013 ORTHO05D000011 8.9e-10 67.8 111 33.3
Nn2g11756 Nelumbo nucifera HOM05D000013 ORTHO05D000011 1.2e-09 67.4 94 37.2
Phvul.011G151900 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 1.2e-09 67.4 128 33.6
QL04p082033 Quercus lobata HOM05D000013 ORTHO05D000011 1.2e-09 67.4 52 57.7
ECA240G3682 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.5e-09 67.0 111 38.7
PGR102G2254 Punica granatum HOM05D000013 ORTHO05D000011 1.5e-09 67.0 94 37.2
Phvul.011G175200 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 2.0e-09 66.6 127 32.3
QL06p010242 Quercus lobata HOM05D000013 ORTHO05D000011 2.0e-09 66.6 98 36.7
PGSC0003DMG401009323 Solanum tuberosum HOM05D000013 ORTHO05D000011 2.6e-09 66.2 102 30.4
Thecc.09G110900 Theobroma cacao HOM05D000013 ORTHO05D000011 2.6e-09 66.2 86 38.4
Nn8g39196 Nelumbo nucifera HOM05D000013 ORTHO05D000011 3.4e-09 65.9 94 35.1
COL.COLO4_35052 Corchorus olitorius HOM05D000013 ORTHO05D006595 4.4e-09 65.5 105 34.3
FAN11G0510 Fragaria x ananassa HOM05D000013 ORTHO05D000011 4.4e-09 65.5 95 33.7
CiPaw.01G238200 Carya illinoinensis HOM05D000013 ORTHO05D000011 5.8e-09 65.1 97 32.0
FAN25G0249 Fragaria x ananassa HOM05D000013 ORTHO05D000011 5.8e-09 65.1 95 33.7
ECA247G1082 Erigeron canadensis HOM05D000102 ORTHO05D000011 7.5e-09 64.7 142 32.4
FvH4_3g15090 Fragaria vesca HOM05D000013 ORTHO05D000011 7.5e-09 64.7 95 32.6
Manes.09G146400 Manihot esculenta HOM05D000013 ORTHO05D000011 7.5e-09 64.7 90 35.6
QL02p085454 Quercus lobata HOM05D000013 ORTHO05D000011 7.5e-09 64.7 85 35.3
Lsat_1_v5_gn_6_73500 Lactuca sativa HOM05D000013 ORTHO05D000011 9.8e-09 64.3 97 36.1
CAN.G773.11 Capsicum annuum HOM05D000013 ORTHO05D000011 1.7e-08 63.5 106 29.2
QL03p072466 Quercus lobata HOM05D000013 ORTHO05D000011 1.7e-08 63.5 103 32.0
Solyc08g076060.3 Solanum lycopersicum HOM05D000013 ORTHO05D000011 1.7e-08 63.5 102 29.4
COL.COLO4_34917 Corchorus olitorius HOM05D000013 ORTHO05D000011 2.2e-08 63.2 80 37.5
Migut.A00581 Erythranthe guttata HOM05D000013 ORTHO05D000011 2.2e-08 63.2 101 33.7
Lsat_1_v5_gn_6_73741 Lactuca sativa HOM05D000013 ORTHO05D000011 2.9e-08 62.8 116 32.8
Medtr8g052420 Medicago truncatula HOM05D000013 ORTHO05D000011 2.9e-08 62.8 108 34.3
Medtr8g052600 Medicago truncatula HOM05D000013 ORTHO05D000011 2.9e-08 62.8 112 33.0
GSVIVG01038330001 Vitis vinifera HOM05D000013 ORTHO05D015669 2.9e-08 62.8 55 40.0
Cfa002594 Carpinus fangiana HOM05D000013 ORTHO05D000011 3.7e-08 62.4 97 30.9
Phvul.011G176700 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 3.7e-08 62.4 92 38.0
RcHm_v2.0_Chr5g0025041 Rosa chinensis HOM05D000013 ORTHO05D000011 3.7e-08 62.4 105 32.4
Sopen08g024710 Solanum pennellii HOM05D000013 ORTHO05D000011 3.7e-08 62.4 102 28.4
FAN17G1786 Fragaria x ananassa HOM05D000013 ORTHO05D000011 4.9e-08 62.0 83 33.7
Lsat_1_v5_gn_5_63500 Lactuca sativa HOM05D000013 ORTHO05D000011 4.9e-08 62.0 105 32.4
GSVIVG01038343001 Vitis vinifera HOM05D000013 ORTHO05D000011 4.9e-08 62.0 56 39.3
CiPaw.02G150600 Carya illinoinensis HOM05D000013 ORTHO05D000011 6.4e-08 61.6 97 30.9
CiPaw.03G232400 Carya illinoinensis HOM05D000013 ORTHO05D000011 6.4e-08 61.6 88 33.0
COL.COLO4_34916 Corchorus olitorius HOM05D000013 ORTHO05D000011 6.4e-08 61.6 80 37.5
FvH4_4g02170 Fragaria vesca HOM05D000013 ORTHO05D000011 6.4e-08 61.6 83 33.7
FAN21G3779 Fragaria x ananassa HOM05D000013 ORTHO05D000011 6.4e-08 61.6 105 30.5
FAN22G0079 Fragaria x ananassa HOM05D000013 ORTHO05D000011 6.4e-08 61.6 83 33.7
Lsat_1_v5_gn_5_63520 Lactuca sativa HOM05D000013 ORTHO05D000011 6.4e-08 61.6 109 32.1
Lj3g0023687 Lotus japonicus HOM05D000013 ORTHO05D000011 6.4e-08 61.6 107 34.6
Oeu031074.1 Olea europaea HOM05D000013 ORTHO05D000011 6.4e-08 61.6 103 35.0
Phvul.011G175000 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 6.4e-08 61.6 107 31.8
ECA240G2929 Erigeron canadensis HOM05D000321 ORTHO05D000204 8.3e-08 61.2 102 33.3
Glyma.15G213600 Glycine max HOM05D000013 ORTHO05D000011 8.3e-08 61.2 104 33.7
FAN21G2181 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.1e-07 60.8 107 29.0
Medtr8g052513 Medicago truncatula HOM05D000013 ORTHO05D000011 1.1e-07 60.8 86 37.2
COL.COLO4_03299 Corchorus olitorius HOM05D000013 ORTHO05D000011 1.4e-07 60.5 103 32.0
FAN11G3396 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.4e-07 60.5 61 36.1
Gohir.A06G158800 Gossypium hirsutum HOM05D000013 ORTHO05D000011 1.4e-07 60.5 78 37.2
Oeu039524.1 Olea europaea HOM05D000013 ORTHO05D000011 1.4e-07 60.5 89 36.0
DCAR_008195 Daucus carota HOM05D000013 ORTHO05D000011 1.9e-07 60.1 109 32.1
Dinv15832 Davidia involucrata HOM05D000013 ORTHO05D000011 1.9e-07 60.1 107 26.2
Lsat_1_v5_gn_6_73701 Lactuca sativa HOM05D000013 ORTHO05D000011 1.9e-07 60.1 105 34.3
Lj3g0026218 Lotus japonicus HOM05D000013 ORTHO05D000011 1.9e-07 60.1 79 36.7
GSVIVG01038347001 Vitis vinifera HOM05D000013 ORTHO05D000011 1.9e-07 60.1 105 32.4
Medtr8g052320 Medicago truncatula HOM05D000013 ORTHO05D000011 2.4e-07 59.7 77 39.0
Sabra16G0298300 Salix brachista HOM05D000013 ORTHO05D000011 2.4e-07 59.7 113 31.0
Sabra16G0300300 Salix brachista HOM05D000013 ORTHO05D000011 2.4e-07 59.7 113 31.0
VMungo1127G2128 Vigna mungo HOM05D000013 ORTHO05D000011 2.4e-07 59.7 78 41.0
Lsat_1_v5_gn_6_73661 Lactuca sativa HOM05D000013 ORTHO05D010607 3.2e-07 59.3 127 30.7
Oeu016912.1 Olea europaea HOM05D000013 ORTHO05D000011 3.2e-07 59.3 111 31.5
Atru.chr2.1440 Acer truncatum HOM05D000013 ORTHO05D000011 4.1e-07 58.9 115 30.4
HanXRQChr03g0081591 Helianthus annuus HOM05D000013 ORTHO05D000011 4.1e-07 58.9 95 34.7
HanXRQChr03g0081601 Helianthus annuus HOM05D000013 ORTHO05D000011 4.1e-07 58.9 95 35.8
Lsat_1_v5_gn_5_63420 Lactuca sativa HOM05D000013 ORTHO05D000011 4.1e-07 58.9 113 30.1
Dinv06887 Davidia involucrata HOM05D000013 ORTHO05D000011 5.4e-07 58.5 108 31.5
ECA233G3943 Erigeron canadensis HOM05D002883 ORTHO05D003116 5.4e-07 58.5 102 32.4
MBI18_g25947_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D000011 5.4e-07 58.5 100 35.0
Nn8g39191 Nelumbo nucifera HOM05D000013 ORTHO05D000011 5.4e-07 58.5 95 31.6
COL.COLO4_35049 Corchorus olitorius HOM05D000013 ORTHO05D011766 7.1e-07 58.2 76 35.5
Dinv06892 Davidia involucrata HOM05D000013 ORTHO05D000011 7.1e-07 58.2 129 31.0
Medtr8g051600 Medicago truncatula HOM05D000013 ORTHO05D000011 7.1e-07 58.2 81 38.3
FvH4_1g04840 Fragaria vesca HOM05D000013 ORTHO05D000011 1.2e-06 57.4 120 29.2
Glyma.08G125800 Glycine max HOM05D000013 ORTHO05D000011 1.6e-06 57.0 106 31.1
Glyma.08G236900 Glycine max HOM05D000013 ORTHO05D000011 1.6e-06 57.0 88 34.1
Gohir.D06G164700 Gossypium hirsutum HOM05D000013 ORTHO05D000011 1.6e-06 57.0 78 35.9
HanXRQChr13g0404661 Helianthus annuus HOM05D000013 ORTHO05D000011 1.6e-06 57.0 106 33.0
Potri.001G441180 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.6e-06 57.0 87 36.8
Sabra16G0298500 Salix brachista HOM05D000013 ORTHO05D000011 1.6e-06 57.0 118 33.1
Sabra16G0300600 Salix brachista HOM05D000013 ORTHO05D000011 1.6e-06 57.0 124 33.9
CiPaw.03G147100 Carya illinoinensis HOM05D000013 ORTHO05D000011 2.1e-06 56.6 99 30.3
RcHm_v2.0_Chr4g0389511 Rosa chinensis HOM05D000013 ORTHO05D000011 2.1e-06 56.6 81 32.1
CSS0002709 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 2.7e-06 56.2 60 40.0
ECA240G2521 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.7e-06 56.2 68 41.2
FAN19G0480 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.7e-06 56.2 120 29.2
FAN26G1380 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.7e-06 56.2 104 29.8
Oeu001877.3 Olea europaea HOM05D000013 ORTHO05D000011 2.7e-06 56.2 73 37.0
Potri.001G437875 Populus trichocarpa HOM05D000013 ORTHO05D000011 2.7e-06 56.2 71 39.4
Prupe.7G230700 Prunus persica HOM05D000013 ORTHO05D000011 3.5e-06 55.8 98 28.6
RcHm_v2.0_Chr5g0024981 Rosa chinensis HOM05D000013 ORTHO05D000011 3.5e-06 55.8 102 32.4
AUR62006010 Chenopodium quinoa HOM05D000013 ORTHO05D000011 4.6e-06 55.5 82 32.9
FAN23G1704 Fragaria x ananassa HOM05D000013 ORTHO05D000011 4.6e-06 55.5 114 28.9
Lj7C129T1 Lonicera japonica HOM05D000013 ORTHO05D000011 6.0e-06 55.1 118 28.8
MBI18_g28035_MAGBIO Magnolia biondii HOM05D000013 ORTHO05D000011 6.0e-06 55.1 54 37.0
Solyc08g076050.4 Solanum lycopersicum HOM05D000013 ORTHO05D000011 6.0e-06 55.1 110 30.0
SGA_v2.0_scaffold89G27422 Striga asiatica HOM05D000013 ORTHO05D000011 6.0e-06 55.1 108 26.9
THA.LOC104803113 Tarenaya hassleriana HOM05D000013 ORTHO05D000011 6.0e-06 55.1 85 32.9
CiPaw.03G147300 Carya illinoinensis HOM05D000013 ORTHO05D000011 7.8e-06 54.7 104 34.6
AUR62035616 Chenopodium quinoa HOM05D000013 ORTHO05D000011 7.8e-06 54.7 90 31.1
Cc04_g03280 Coffea canephora HOM05D000013 ORTHO05D000011 7.8e-06 54.7 58 37.9
Prupe.4G135600 Prunus persica HOM05D000013 ORTHO05D000011 7.8e-06 54.7 101 33.7
Sc13g0009240 Simmondsia chinensis HOM05D000013 ORTHO05D000011 7.8e-06 54.7 97 32.0


User provided reference genes

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