Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 5.2e-60 234.2 119 100.0
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.3e-37 159.8 119 70.6
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.4e-36 156.4 103 77.7
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 3.1e-36 155.2 119 68.9
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 7.6e-35 150.6 106 73.6
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 1.0e-34 150.2 119 68.1
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-34 149.8 112 71.4
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 2.9e-34 148.7 103 73.8
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 3.8e-34 148.3 103 73.8
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 3.2e-33 145.2 119 65.5
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 1.2e-32 143.3 122 64.8
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 4.6e-32 141.4 123 66.7
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 3.9e-31 138.3 117 62.4
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 1.5e-30 136.3 85 80.0
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.9e-30 136.0 123 61.8
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 2.5e-30 135.6 123 64.2
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.5e-30 135.6 126 55.6
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 4.3e-30 134.8 119 59.7
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 7.4e-30 134.0 120 60.8
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 2.1e-29 132.5 120 59.2
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.1e-29 132.5 123 63.4
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 2.8e-29 132.1 121 62.8
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 6.2e-29 131.0 118 56.8
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 8.2e-29 130.6 102 64.7
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 1.4e-28 129.8 120 58.3
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 1.8e-28 129.4 85 76.5
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 2.4e-28 129.0 102 63.7
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 4.1e-28 128.3 122 58.2
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 1.2e-27 126.7 122 55.7
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 1.5e-27 126.3 119 62.2
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 2.0e-27 125.9 126 54.0
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 2.0e-27 125.9 117 59.0
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 7.6e-27 124.0 117 57.3
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 1.0e-26 123.6 125 52.8
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 1.3e-26 123.2 126 53.2
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 1.7e-26 122.9 110 60.9
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 2.2e-26 122.5 121 56.2
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.2e-26 122.5 86 72.1
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 2.2e-26 122.5 124 61.3
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 5.0e-26 121.3 119 52.9
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 5.0e-26 121.3 119 52.9
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.1e-25 120.2 119 52.1
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.1e-25 120.2 119 52.1
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.4e-25 119.8 122 54.1
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 1.9e-25 119.4 119 53.8
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.9e-25 119.4 97 61.9
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 2.5e-25 119.0 119 52.9
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 4.2e-25 118.2 108 64.8
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 4.2e-25 118.2 87 65.5
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 5.5e-25 117.9 87 64.4
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 5.5e-25 117.9 87 63.2
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 9.3e-25 117.1 120 55.0
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 2.7e-24 115.5 103 55.3
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 2.7e-24 115.5 102 63.7
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 3.5e-24 115.2 115 53.9
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 4.6e-24 114.8 85 65.9
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.3e-23 113.2 119 52.1
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 1.3e-23 113.2 117 50.4
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 3.0e-23 112.1 120 52.5
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 3.9e-23 111.7 93 57.0
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 5.1e-23 111.3 115 53.0
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 6.7e-23 110.9 92 56.5
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 1.5e-22 109.8 110 51.8
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 1.9e-22 109.4 86 60.5
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 7.4e-22 107.5 117 51.3
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 7.4e-22 107.5 74 70.3
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 7.4e-22 107.5 74 70.3
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 9.7e-22 107.1 74 70.3
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 2.8e-21 105.5 124 51.6
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 3.7e-21 105.1 85 58.8
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 3.7e-21 105.1 85 58.8
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 1.4e-20 103.2 102 49.0
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.4e-20 103.2 87 57.5
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 1.4e-20 103.2 83 63.9
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 1.8e-20 102.8 84 57.1
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 4.1e-20 101.7 93 54.8
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 9.0e-20 100.5 122 48.4
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 9.0e-20 100.5 83 63.9
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 9.0e-20 100.5 109 50.5
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 3.4e-19 98.6 105 53.3
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 5.9e-19 97.8 119 48.7
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 7.7e-19 97.4 125 44.8
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 7.7e-19 97.4 166 39.8
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 1.3e-18 96.7 83 62.7
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 5.0e-18 94.7 74 59.5
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 3.2e-17 92.0 122 44.3
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 7.9e-16 87.4 78 59.0
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.8e-15 86.3 91 49.5
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 2.3e-15 85.9 61 63.9
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 5.1e-15 84.7 57 68.4
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 2.8e-13 79.0 62 59.7
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 5.3e-12 74.7 65 53.8
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.4e-09 63.9 78 52.6
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 9.4e-09 63.9 78 51.3
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.7e-08 62.4 78 51.3
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.7e-08 62.4 78 51.3
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 3.6e-08 62.0 86 33.7
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 7.9e-08 60.8 63 46.0
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.9e-08 60.8 78 48.7
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 1.0e-07 60.5 77 41.6
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 1.4e-07 60.1 51 51.0
Nitab4.5_0001036g0140 Nicotiana tabacum HOM05D007659 ORTHO05D009227 3.0e-07 58.9 60 50.0
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.1e-07 58.2 78 47.4
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.7e-07 57.8 78 48.7
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 8.8e-07 57.4 91 45.1
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.6e-06 55.8 78 48.7


User provided reference genes

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