Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 6.0e-77 290.8 151 100.0
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.8e-34 149.1 136 72.1
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 6.3e-34 147.9 135 69.6
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.9e-31 139.0 133 68.4
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 5.0e-31 138.3 131 64.1
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 5.0e-31 138.3 129 68.2
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.9e-30 136.3 135 64.4
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 3.6e-29 132.1 128 63.3
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 6.1e-29 131.3 132 65.9
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 1.4e-28 130.2 132 65.2
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.8e-28 129.8 131 64.1
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 8.8e-28 127.5 128 61.7
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 8.8e-28 127.5 131 64.1
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 8.8e-28 127.5 131 64.1
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.1e-27 127.1 132 63.6
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.1e-27 127.1 131 62.6
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 1.1e-27 127.1 128 64.1
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.5e-27 126.7 128 61.7
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 2.0e-27 126.3 123 61.0
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 2.0e-27 126.3 131 65.6
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 2.6e-27 125.9 131 61.8
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.3e-27 125.6 128 64.1
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.3e-27 125.6 128 63.3
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.7e-27 124.8 131 62.6
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 9.7e-27 124.0 138 61.6
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.3e-26 123.6 119 64.7
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.1e-25 120.6 137 59.1
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.4e-25 120.2 123 63.4
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 3.1e-25 119.0 131 58.8
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 3.1e-25 119.0 131 58.8
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 4.1e-25 118.6 128 64.1
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 5.3e-25 118.2 125 60.8
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 5.3e-25 118.2 128 61.7
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 6.9e-25 117.9 131 56.5
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 9.1e-25 117.5 128 58.6
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.5e-24 116.7 128 61.7
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.5e-24 116.7 121 63.6
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.0e-24 116.3 128 58.6
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 4.5e-24 115.2 129 62.0
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 5.9e-24 114.8 128 60.9
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.2e-23 112.8 129 61.2
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 2.9e-23 112.5 126 56.3
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.9e-23 112.5 122 60.7
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.8e-23 112.1 128 57.8
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 8.5e-23 110.9 125 56.8
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.1e-22 110.5 118 59.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.1e-22 110.5 118 59.3
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.1e-22 110.5 109 63.3
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.4e-22 110.2 122 55.7
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.9e-22 109.8 118 59.3
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.9e-22 109.8 122 57.4
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.9e-22 109.8 127 59.8
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.2e-22 109.0 108 63.0
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.2e-22 109.0 129 55.0
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 4.2e-22 108.6 124 57.3
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 4.2e-22 108.6 112 60.7
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 4.2e-22 108.6 103 62.1
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.2e-21 107.1 133 52.6
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.2e-21 107.1 114 64.0
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 1.6e-21 106.7 127 54.3
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.6e-21 106.7 127 55.9
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.6e-21 106.7 127 55.9
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.6e-21 106.7 87 69.0
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.6e-21 106.7 131 54.2
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.1e-21 106.3 122 55.7
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 3.6e-21 105.5 139 53.2
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.6e-21 105.5 128 56.2
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 3.6e-21 105.5 109 61.5
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 3.6e-21 105.5 130 52.3
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 6.1e-21 104.8 114 60.5
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 7.9e-21 104.4 128 54.7
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 7.9e-21 104.4 128 54.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.0e-20 104.0 116 52.6
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.0e-20 104.0 117 59.8
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 2.3e-20 102.8 128 53.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 3.0e-20 102.4 130 53.1
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 3.9e-20 102.1 131 49.6
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 5.2e-20 101.7 104 64.4
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 1.1e-19 100.5 110 57.3
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.1e-19 100.5 129 52.7
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 3.3e-19 99.0 137 52.6
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 5.7e-19 98.2 128 52.3
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.3e-18 97.1 115 54.8
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.3e-18 97.1 105 59.0
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.3e-18 97.1 128 56.2
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.7e-18 96.7 128 51.6
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.2e-18 96.3 126 53.2
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 4.8e-18 95.1 110 52.7
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 6.3e-18 94.7 133 54.1
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 8.2e-18 94.4 113 59.3
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 8.2e-18 94.4 131 55.0
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.1e-17 94.0 60 83.3
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.4e-17 92.8 109 55.0
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 3.1e-17 92.4 126 52.4
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 5.3e-17 91.7 133 50.4
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 7.0e-17 91.3 110 51.8
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 9.1e-17 90.9 130 48.5
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 9.1e-17 90.9 117 51.3
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.6e-16 90.1 111 52.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.6e-16 90.1 117 52.1
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.0e-16 89.7 56 80.4
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 7.7e-16 87.8 67 74.6
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.0e-15 87.4 129 48.1
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 2.2e-15 86.3 61 78.7
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 8.5e-15 84.3 85 55.3
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.9e-14 83.2 110 50.0
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.9e-14 83.2 110 50.0
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 2.5e-14 82.8 110 50.0
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 4.2e-14 82.0 131 48.9
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 1.2e-13 80.5 110 50.9
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.4e-12 77.0 53 75.5
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.8e-12 76.6 44 90.9
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.8e-12 76.6 44 90.9
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.3e-12 76.3 140 44.3
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 6.7e-12 74.7 94 54.3
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 2.0e-11 73.2 125 44.0
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 4.8e-10 68.6 59 61.0
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.8e-09 66.6 60 61.7
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.2e-08 63.9 49 67.3
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.6e-08 63.5 109 43.1
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.5e-08 62.4 51 68.6
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.2e-07 59.7 43 74.4
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 3.8e-07 58.9 63 57.1


User provided reference genes

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