Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 0.0e+00 1400.6 714 100.0
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 0.0e+00 1178.3 714 83.9
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 0.0e+00 1123.2 715 80.3
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 0.0e+00 1109.7 721 79.8
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 4.9e-312 1073.5 705 77.9
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 6.5e-307 1057.0 712 77.7
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 6.5e-307 1057.0 712 77.7
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 2.3e-304 1048.5 695 76.0
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.2e-303 1046.2 718 75.6
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 1.3e-302 1042.7 715 74.4
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.3e-299 1032.7 711 74.5
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.1e-298 1029.6 709 74.2
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.5e-298 1029.2 706 74.4
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 2.7e-297 1025.0 696 75.1
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 3.6e-297 1024.6 710 74.9
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 6.1e-297 1023.8 714 73.1
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.0e-296 1023.1 759 70.2
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.8e-296 1022.3 718 73.3
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 5.2e-296 1020.8 715 73.6
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.1e-293 1013.1 684 75.1
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 1.1e-293 1013.1 698 73.6
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.2e-292 1009.6 698 73.6
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 2.7e-292 1008.4 698 75.4
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 3.5e-292 1008.1 683 73.8
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 3.5e-292 1008.1 714 72.8
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 1.3e-291 1006.1 699 74.2
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.1e-290 1003.0 714 72.4
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.9e-290 1002.3 714 73.0
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 7.2e-290 1000.3 674 74.5
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 1.0e-288 996.5 693 73.0
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 1.4e-288 996.1 714 72.4
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.4e-288 996.1 714 72.4
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 3.4e-287 991.5 704 72.4
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 5.7e-287 990.7 710 72.8
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 7.5e-287 990.3 719 71.5
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.2e-286 988.8 688 72.8
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 2.4e-285 985.3 717 71.0
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 5.4e-285 984.2 718 71.2
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 7.0e-285 983.8 711 72.0
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 2.7e-284 981.9 696 74.4
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 5.9e-284 980.7 687 72.8
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 7.8e-284 980.3 716 71.2
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 7.8e-284 980.3 669 74.3
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 1.0e-283 979.9 673 73.3
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 2.3e-283 978.8 705 71.8
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 5.0e-283 977.6 681 73.3
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 6.6e-283 977.2 681 73.6
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 8.6e-283 976.9 691 72.5
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 2.5e-282 975.3 717 70.6
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 3.3e-282 974.9 691 72.2
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 1.2e-281 973.0 691 72.1
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 2.1e-281 972.2 691 72.2
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 6.1e-281 970.7 691 72.2
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 4.0e-280 968.0 711 69.9
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 6.8e-280 967.2 691 71.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 1.2e-279 966.5 712 70.1
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.5e-279 966.1 723 70.1
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 3.4e-279 964.9 692 71.4
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 3.7e-278 961.4 698 71.8
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 4.1e-277 958.0 695 71.2
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 3.5e-276 954.9 677 72.7
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 3.9e-275 951.4 675 71.9
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 5.0e-275 951.0 704 70.3
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 4.3e-274 948.0 688 70.8
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 4.7e-273 944.5 675 72.0
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 2.3e-272 942.2 685 70.9
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 4.4e-271 937.9 720 68.3
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 2.2e-270 935.6 688 69.8
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 4.9e-270 934.5 704 68.8
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.4e-269 932.2 705 69.6
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.3e-267 926.4 639 75.1
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 6.6e-267 924.1 672 71.0
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 8.6e-267 923.7 669 71.3
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 5.6e-266 921.0 605 77.9
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.8e-257 892.1 721 65.0
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 8.1e-257 890.6 675 66.2
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.4e-256 889.8 710 66.5
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.6e-252 876.3 674 68.1
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.7e-252 875.5 598 72.2
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.3e-251 873.2 730 63.4
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 2.3e-251 872.5 596 73.0
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 1.2e-244 850.1 709 64.9
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.2e-244 850.1 681 64.0
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 3.9e-243 845.1 712 63.9
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 8.1e-241 837.4 611 71.2
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.2e-239 833.6 585 73.3
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 6.4e-238 827.8 706 61.9
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.1e-237 827.0 574 73.3
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.5e-234 816.6 586 71.0
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 5.1e-227 791.6 635 65.0
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 2.7e-212 742.7 1251 40.0
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.0e-186 656.8 668 51.8
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 6.3e-185 651.7 639 54.1
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 3.5e-183 646.0 620 54.2
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 4.5e-183 645.6 447 74.3
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 2.0e-178 630.2 622 53.5
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.2e-173 612.5 399 76.4
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 3.7e-169 599.4 400 73.5
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 4.9e-161 572.4 431 71.2
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.9e-137 493.4 727 42.2
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 4.3e-133 479.6 333 71.5
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 1.9e-128 464.2 617 43.9
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 4.6e-127 459.5 475 52.4
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 3.9e-118 429.9 274 77.0
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.9e-110 403.3 318 68.6
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.1e-99 367.1 224 81.2
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 9.0e-99 365.5 465 49.0
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.7e-92 344.7 290 64.5
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.7e-89 334.7 309 61.5
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 4.8e-84 316.6 268 65.3
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.0e-81 308.9 202 76.2
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.6e-79 301.6 202 73.3
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 5.7e-77 293.1 632 35.0
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.6e-63 248.4 154 81.8
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.2e-47 195.7 148 70.3
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 4.7e-47 193.7 148 64.9
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 2.3e-38 164.9 202 51.5
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.9e-32 145.2 176 50.6
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 2.3e-30 138.3 103 65.0
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 1.2e-26 125.9 140 52.1
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 3.3e-24 117.9 115 56.5
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 3.4e-21 107.8 68 73.5
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 2.7e-18 98.2 117 43.6
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 9.6e-16 89.7 51 80.4
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 3.1e-14 84.7 106 50.0
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.6e-10 72.4 68 54.4


User provided reference genes

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