Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 7.4e-209 730.3 378 100.0
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 1.2e-163 580.1 377 80.6
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 3.9e-157 558.5 377 78.2
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 9.8e-145 517.3 374 71.9
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 6.0e-142 508.1 371 71.7
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.7e-141 506.5 367 71.4
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 5.1e-141 505.0 380 69.7
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 8.1e-139 497.7 370 70.8
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 2.3e-138 496.1 367 71.7
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 3.1e-138 495.7 378 69.3
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.5e-137 493.4 388 67.3
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.8e-137 491.5 378 67.5
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 7.1e-135 484.6 380 67.9
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.1e-134 483.0 392 66.1
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.8e-131 472.6 397 64.7
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.4e-130 470.3 377 67.1
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 1.2e-129 467.2 371 68.2
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 2.0e-129 466.5 369 67.5
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.6e-129 466.1 376 66.0
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 3.4e-129 465.7 349 69.6
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 1.9e-127 459.9 387 65.1
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 4.2e-127 458.8 390 64.6
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 6.0e-126 454.9 402 64.2
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 6.6e-125 451.4 368 67.4
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 6.6e-125 451.4 380 63.7
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 8.7e-125 451.1 389 63.8
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 1.9e-124 449.9 374 63.6
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.4e-122 443.7 382 65.7
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.4e-122 443.0 365 64.7
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 3.1e-122 442.6 363 65.0
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 3.1e-122 442.6 360 65.0
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 5.3e-122 441.8 471 55.6
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.7e-120 436.8 383 62.7
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 2.9e-120 436.0 373 62.7
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 8.4e-120 434.5 382 61.8
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 1.1e-119 434.1 376 62.2
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 1.9e-119 433.3 386 60.6
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 2.4e-119 433.0 410 59.0
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 6.0e-118 428.3 393 58.5
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 2.5e-116 422.9 376 63.0
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.1e-114 417.5 416 57.0
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.4e-114 416.4 371 59.3
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 9.0e-114 414.5 365 62.2
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 9.0e-114 414.5 412 55.1
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 2.9e-112 409.5 364 60.4
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 6.4e-112 408.3 381 59.6
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 2.4e-111 406.4 366 60.7
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.6e-110 403.7 351 63.2
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 2.5e-108 396.4 364 56.3
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.3e-108 395.6 368 60.1
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 9.6e-108 394.4 377 57.8
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 1.3e-107 394.0 367 55.9
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 1.3e-107 394.0 367 55.9
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.6e-107 393.7 376 58.0
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 3.7e-107 392.5 396 55.8
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 6.2e-107 391.7 383 54.8
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 9.0e-106 387.9 374 55.1
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 3.4e-105 386.0 374 55.3
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 1.0e-104 384.4 335 61.8
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 3.8e-104 382.5 374 55.1
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 5.5e-103 378.6 377 54.9
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 9.3e-103 377.9 363 57.3
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 4.6e-102 375.6 433 50.3
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 6.7e-101 371.7 387 53.5
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.5e-100 370.5 326 59.8
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.3e-100 369.4 416 49.5
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 9.6e-100 367.9 411 51.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 3.7e-99 365.9 399 50.9
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 4.8e-99 365.5 372 53.5
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 6.3e-99 365.2 283 70.0
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 4.1e-98 362.5 317 59.9
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 1.3e-96 357.5 329 60.8
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 2.2e-96 356.7 367 52.6
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.2e-96 356.7 365 52.9
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.1e-95 354.4 387 53.0
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 2.5e-95 353.2 379 52.0
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 4.6e-94 349.0 391 50.1
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 3.0e-93 346.3 295 64.1
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 1.1e-90 337.8 422 47.6
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.1e-90 337.8 364 54.4
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 3.1e-90 336.3 364 51.1
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 3.8e-88 329.3 306 60.5
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 3.8e-88 329.3 306 60.5
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 3.8e-88 329.3 321 57.6
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 5.0e-88 328.9 387 49.4
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.9e-87 327.0 345 53.0
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 2.5e-87 326.6 431 45.5
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 5.3e-82 308.9 360 48.6
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 6.7e-77 292.0 364 46.7
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 4.4e-76 289.3 294 56.8
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 5.0e-72 275.8 360 44.7
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 7.2e-71 271.9 376 44.1
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 3.6e-70 269.6 174 78.2
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.0e-64 251.5 414 41.3
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 7.2e-63 245.4 178 66.9
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 7.0e-58 228.8 304 47.4
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.5e-55 221.1 376 40.7
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 2.1e-54 217.2 162 66.0
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 2.7e-49 200.3 147 66.7
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.4e-42 177.9 163 62.0
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.3e-40 170.6 127 71.7
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 6.6e-40 169.1 179 54.7
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 7.1e-26 122.5 91 64.8
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 7.1e-26 122.5 91 64.8
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 2.3e-24 117.5 363 28.7
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 1.9e-23 114.4 112 56.2
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 2.5e-23 114.0 152 47.4
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 3.6e-22 110.2 154 43.5
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 4.7e-22 109.8 150 42.0
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 2.1e-09 67.8 60 56.7
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 2.1e-09 67.8 99 43.4


User provided reference genes

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