Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 5.2e-105 384.4 196 100.0
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 3.6e-82 308.5 196 84.2
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.7e-79 299.7 196 79.1
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.2e-77 293.5 196 77.6
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 5.0e-76 288.1 196 77.6
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 6.6e-76 287.7 196 76.0
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.8e-73 279.6 196 76.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.8e-73 279.6 197 76.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 3.1e-73 278.9 196 78.1
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 4.0e-73 278.5 196 77.6
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 6.8e-73 277.7 196 75.5
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.2e-72 276.9 196 77.0
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 7.5e-72 274.2 196 75.0
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 9.8e-72 273.9 196 75.0
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.7e-71 273.1 194 78.4
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.7e-71 273.1 196 77.0
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.7e-71 273.1 196 77.0
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 3.7e-71 271.9 196 75.5
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 6.4e-71 271.2 196 75.0
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.1e-70 268.5 196 74.5
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.1e-70 268.5 196 74.5
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 3.5e-69 265.4 195 75.9
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 3.5e-69 265.4 196 70.9
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 6.0e-69 264.6 196 73.5
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 7.8e-69 264.2 196 74.0
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.0e-68 263.8 193 75.6
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 1.0e-68 263.8 197 74.6
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.3e-68 263.5 196 75.5
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 1.7e-68 263.1 196 75.0
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 3.0e-68 262.3 196 73.0
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 3.9e-68 261.9 196 73.5
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 5.0e-68 261.5 190 77.4
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 5.0e-68 261.5 194 74.7
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 5.0e-68 261.5 196 73.0
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 6.6e-68 261.2 196 74.5
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 8.6e-68 260.8 196 73.0
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 8.6e-68 260.8 196 72.4
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 3.3e-67 258.8 196 72.4
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 4.3e-67 258.5 196 73.0
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.6e-66 256.5 197 74.1
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.1e-66 256.1 196 71.9
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 3.6e-66 255.4 196 74.0
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 1.1e-65 253.8 195 72.8
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-65 253.8 197 72.1
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.8e-65 253.1 197 72.1
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 3.4e-64 248.8 197 73.1
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 5.8e-64 248.1 196 68.9
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 9.9e-64 247.3 177 76.3
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.9e-63 245.7 139 92.1
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 2.9e-63 245.7 173 77.5
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 6.4e-63 244.6 196 69.9
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 6.4e-63 244.6 146 89.0
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 6.4e-63 244.6 190 72.1
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 6.4e-63 244.6 198 67.7
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.1e-62 243.8 198 69.2
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.9e-62 243.0 198 70.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.9e-62 243.0 187 71.7
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 3.2e-62 242.3 198 70.7
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 4.1e-62 241.9 160 81.9
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 5.4e-62 241.5 175 75.4
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 1.6e-61 240.0 161 78.3
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.1e-61 239.6 199 68.8
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 2.7e-61 239.2 196 68.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 4.6e-61 238.4 196 69.4
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 4.6e-61 238.4 201 68.7
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 6.0e-61 238.0 171 76.0
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 6.0e-61 238.0 182 73.6
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.3e-60 236.9 195 67.2
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.3e-60 236.1 175 74.3
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.0e-60 235.7 196 65.3
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 3.9e-60 235.3 193 71.5
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 3.9e-60 235.3 164 76.2
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 8.6e-60 234.2 196 67.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 8.6e-60 234.2 169 76.3
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.9e-59 233.0 139 87.8
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 2.5e-59 232.6 159 79.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.8e-58 229.2 174 73.6
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.6e-58 228.8 142 86.6
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.6e-58 228.8 197 67.0
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 6.2e-58 228.0 198 66.2
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 6.2e-58 228.0 196 66.8
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 8.1e-58 227.6 195 67.7
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 1.1e-57 227.3 142 85.9
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 1.4e-57 226.9 202 66.3
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.4e-57 226.1 145 83.4
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.4e-57 226.1 142 85.9
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 2.4e-57 226.1 142 85.9
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 2.4e-57 226.1 182 72.0
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 3.1e-57 225.7 141 83.0
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.1e-57 225.7 147 81.0
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 4.0e-57 225.3 194 69.6
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 4.0e-57 225.3 202 63.9
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 6.8e-57 224.6 180 72.2
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 6.8e-57 224.6 142 83.8
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 6.8e-57 224.6 196 66.8
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 8.9e-57 224.2 197 66.5
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 2.0e-56 223.0 197 66.0
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.6e-56 222.6 163 74.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.6e-56 222.6 147 81.6
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 2.6e-56 222.6 141 85.1
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.6e-56 222.6 172 72.7
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.6e-56 222.6 139 84.9
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 3.4e-56 222.2 178 70.8
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 4.4e-56 221.9 142 83.8
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 4.4e-56 221.9 142 83.8
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 4.4e-56 221.9 142 83.8
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 4.4e-56 221.9 142 83.8
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.4e-56 221.9 197 65.0
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 4.4e-56 221.9 161 75.8
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 5.8e-56 221.5 141 84.4
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.3e-55 220.3 139 83.5
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-55 219.9 141 82.3
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 2.2e-55 219.5 172 72.7
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.2e-55 219.5 190 69.5
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 3.8e-55 218.8 197 65.0
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 4.9e-55 218.4 176 71.0
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 6.4e-55 218.0 197 64.5
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 8.4e-55 217.6 133 86.5
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 8.4e-55 217.6 175 69.7
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.1e-54 217.2 179 70.9
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.9e-54 216.5 140 82.1
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.9e-54 216.5 141 80.1
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.6e-53 213.4 147 79.6
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.0e-52 210.7 197 64.0
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 1.5e-51 206.8 143 79.7
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 9.6e-51 204.1 175 66.3
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.2e-50 203.8 115 92.2
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.2e-50 203.8 142 78.9
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 2.1e-50 203.0 164 70.1
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 6.2e-50 201.4 142 78.2
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 8.1e-50 201.1 112 92.0
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 2.4e-49 199.5 172 69.2
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 9.0e-49 197.6 114 90.4
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 9.0e-49 197.6 114 90.4
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 5.8e-48 194.9 112 89.3
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 7.6e-48 194.5 112 91.1
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 7.6e-48 194.5 196 60.7
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.7e-47 193.4 196 60.2
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.1e-46 190.7 112 90.2
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 4.6e-45 185.3 160 64.4
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.3e-44 183.7 170 64.1
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 1.3e-44 183.7 137 70.1
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.7e-44 183.3 139 70.5
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.6e-44 181.4 142 69.7
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.5e-43 180.3 142 72.5
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.9e-43 179.9 162 66.7
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 3.3e-43 179.1 347 38.6
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.3e-42 177.2 140 69.3
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.8e-42 176.0 107 82.2
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 1.1e-41 174.1 134 70.9
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 9.0e-41 171.0 142 62.7
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 2.0e-40 169.9 141 66.7
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 1.4e-38 163.7 111 73.9
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.4e-38 163.7 113 74.3
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 4.6e-37 158.7 132 64.4
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 6.0e-37 158.3 128 68.8
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 6.7e-28 128.3 109 60.6
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 2.5e-27 126.3 79 82.3
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 4.5e-24 115.5 134 50.0
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.9e-23 112.8 91 69.2
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 6.5e-23 111.7 91 68.1
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-22 110.5 85 70.6
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 4.2e-22 109.0 86 72.1
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.7e-21 106.3 86 70.9
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.7e-21 106.3 86 70.9
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 3.7e-18 95.9 83 61.4
Lalb_Chr12g0198741 Lupinus albus HOM05D004106 ORTHO05D004381 1.2e-13 80.9 82 52.4
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 2.1e-13 80.1 49 85.7
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 2.1e-13 80.1 44 93.2
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.4e-12 77.4 47 83.0
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.8e-09 67.0 57 66.7
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 7.7e-08 61.6 56 57.1
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.4e-06 57.4 102 41.2
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 109 39.4
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 109 39.4
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 109 39.4
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 109 39.4
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 5.5e-06 55.5 133 38.3
Psat5g263840 Pisum sativum HOM05D001198 ORTHO05D001599 5.5e-06 55.5 95 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5940 Anthoceros agrestis HOM05D010958 ORTHO05D004381 7.2e-06 55.1 107 39.3


User provided reference genes

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