Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 2.6e-124 448.7 232 100.0
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 7.2e-98 360.9 232 80.2
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.1e-93 347.1 232 78.0
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 2.8e-89 332.4 232 75.9
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.8e-89 332.4 232 76.3
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 3.6e-89 332.0 228 77.2
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 8.0e-89 330.9 232 73.7
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 6.8e-88 327.8 232 74.1
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 6.8e-88 327.8 232 75.0
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 8.9e-88 327.4 234 74.4
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 4.4e-87 325.1 232 74.1
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.7e-86 323.2 232 72.8
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 2.9e-86 322.4 232 72.0
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 4.9e-86 321.6 232 73.7
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 6.4e-86 321.2 232 72.4
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 2.4e-85 319.3 232 72.0
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 5.4e-85 318.2 232 72.8
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 7.0e-85 317.8 232 72.8
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 9.2e-85 317.4 232 71.6
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 3.5e-84 315.5 232 70.3
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 4.6e-84 315.1 234 71.8
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 7.8e-84 314.3 232 70.3
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.3e-83 313.5 226 74.8
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 1.7e-83 313.2 234 72.2
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 3.9e-83 312.0 232 71.1
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 5.0e-83 311.6 232 70.3
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 6.6e-83 311.2 229 72.5
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 8.6e-83 310.8 233 71.2
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 1.9e-82 309.7 232 69.4
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 1.9e-82 309.7 233 72.1
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 7.3e-82 307.8 234 69.7
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 7.3e-82 307.8 232 71.1
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 2.1e-81 306.2 232 70.7
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 2.8e-81 305.8 232 69.0
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 3.6e-81 305.4 228 72.8
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 6.2e-81 304.7 232 69.8
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.4e-80 303.5 232 70.7
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 5.2e-80 301.6 232 67.7
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 2.0e-79 299.7 233 68.7
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 2.6e-79 299.3 226 70.4
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 4.4e-79 298.5 226 72.6
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.7e-78 295.4 226 69.5
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 3.7e-78 295.4 233 65.7
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 8.3e-78 294.3 233 64.8
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 2.4e-77 292.7 232 65.1
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 5.4e-77 291.6 232 66.8
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 5.4e-77 291.6 232 65.1
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 9.2e-77 290.8 226 71.2
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 9.2e-77 290.8 232 67.7
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 1.2e-76 290.4 226 70.4
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.2e-76 290.4 281 59.1
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 2.7e-76 289.3 232 65.9
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 7.8e-76 287.7 232 66.8
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 1.7e-75 286.6 232 69.0
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 2.3e-75 286.2 232 65.5
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 8.6e-75 284.3 232 63.4
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 1.9e-74 283.1 226 66.8
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 2.5e-74 282.7 226 67.3
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 2.5e-74 282.7 232 63.4
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 3.3e-74 282.3 232 64.7
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 3.3e-74 282.3 232 64.7
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 1.2e-73 280.4 232 65.5
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 6.8e-72 274.6 232 63.4
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 6.8e-72 274.6 237 61.6
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 1.2e-71 273.9 232 63.4
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 2.0e-71 273.1 233 63.5
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 2.6e-71 272.7 232 63.8
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 2.6e-71 272.7 226 64.6
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 9.9e-71 270.8 214 67.3
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.7e-70 270.0 232 65.5
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 6.4e-70 268.1 232 65.9
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 8.3e-70 267.7 232 63.4
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 1.9e-69 266.5 225 62.2
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.9e-69 266.5 226 65.0
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.9e-69 266.5 232 61.2
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 2.4e-69 266.2 232 61.6
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.6e-68 263.5 227 62.1
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 1.6e-68 263.5 233 61.4
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 2.1e-68 263.1 234 61.5
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 2.7e-68 262.7 237 61.6
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.3e-67 260.4 232 59.9
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.7e-67 260.0 219 63.9
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 2.3e-67 259.6 232 60.3
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.1e-66 257.3 245 60.0
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 1.5e-66 256.9 232 57.8
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 5.6e-66 255.0 232 57.3
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 1.6e-65 253.4 226 60.6
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 8.4e-62 241.1 232 54.7
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 8.4e-62 241.1 213 61.0
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 1.1e-61 240.7 232 55.6
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 3.5e-60 235.7 255 54.5
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 7.8e-60 234.6 235 55.3
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 7.3e-58 228.0 234 58.1
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 4.0e-56 222.2 166 72.9
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 5.2e-56 221.9 226 55.3
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.2e-56 221.9 208 59.6
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 4.9e-54 215.3 226 54.9
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 6.4e-54 214.9 235 50.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.1e-53 214.2 195 63.6
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 1.9e-53 213.4 236 50.8
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.4e-53 213.0 233 49.8
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 4.2e-53 212.2 258 48.8
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 3.5e-52 209.1 236 48.7
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.0e-51 207.6 164 70.1
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 3.0e-51 206.1 232 49.1
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.9e-50 203.4 221 48.9
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 4.3e-50 202.2 228 50.0
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.7e-46 190.3 164 62.8
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 4.2e-45 185.7 220 48.2
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 1.1e-34 151.0 107 71.0
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-33 146.7 261 34.1
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 3.7e-33 146.0 146 58.9
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.0e-30 137.9 117 63.2
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 3.8e-30 136.0 93 71.0
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.9e-29 133.7 196 46.4
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 3.2e-29 132.9 94 69.1
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.9e-26 123.6 116 59.5
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 1.8e-24 117.1 229 34.1
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 1.0e-22 111.3 273 29.3
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.0e-22 111.3 74 77.0
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 7.2e-21 105.1 90 61.1
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 1.6e-20 104.0 196 34.7
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 2.7e-20 103.2 90 60.0
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 2.7e-20 103.2 90 60.0
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 6.1e-20 102.1 175 42.3
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 6.1e-20 102.1 175 42.3
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 5.1e-19 99.0 90 57.8
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.9e-18 97.1 63 71.4
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.5e-15 87.4 67 67.2
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 4.5e-15 85.9 74 67.6
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 5.0e-14 82.4 93 54.8
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 8.5e-14 81.6 77 53.2
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 7.9e-12 75.1 54 70.4


User provided reference genes

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