Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 5.9e-61 237.3 113 100.0
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 5.7e-56 220.7 112 93.8
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 1.3e-55 219.5 112 92.9
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.1e-54 216.5 111 92.8
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 1.2e-48 196.4 111 80.2
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.8e-46 189.1 113 77.0
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 3.1e-46 188.3 111 76.6
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 5.3e-46 187.6 113 75.2
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 5.3e-46 187.6 113 75.2
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 5.3e-46 187.6 111 74.8
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 7.0e-46 187.2 111 77.5
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.2e-45 186.4 111 75.7
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.6e-45 186.0 113 78.8
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.0e-45 185.7 113 77.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 2.0e-45 185.7 113 77.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.0e-45 185.7 113 75.2
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 2.0e-45 185.7 113 75.2
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.0e-45 185.7 111 74.8
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.0e-45 185.7 111 77.5
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 2.7e-45 185.3 111 76.6
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 2.7e-45 185.3 113 74.3
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 3.5e-45 184.9 111 80.2
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 7.7e-45 183.7 111 73.9
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 1.0e-44 183.3 113 72.6
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.0e-44 183.3 112 75.0
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.3e-44 183.0 109 73.4
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.9e-44 181.8 111 75.7
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.9e-44 181.8 111 75.7
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 3.8e-44 181.4 112 75.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 5.0e-44 181.0 111 73.0
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 6.5e-44 180.6 113 74.3
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.5e-43 179.5 111 74.8
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.9e-43 179.1 111 72.1
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.5e-43 178.7 111 74.8
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 4.2e-43 177.9 111 73.9
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 4.2e-43 177.9 105 77.1
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.6e-42 176.0 112 73.2
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 4.7e-42 174.5 111 72.1
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 1.8e-41 172.6 107 73.8
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 1.8e-41 172.6 107 73.8
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 1.8e-41 172.6 107 73.8
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.8e-41 172.6 109 72.5
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 4.0e-41 171.4 111 71.2
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.0e-41 171.4 111 71.2
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 5.2e-41 171.0 122 68.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 6.8e-41 170.6 113 68.1
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.8e-41 170.6 111 71.2
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.8e-41 170.6 111 71.2
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 8.8e-41 170.2 100 78.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 8.8e-41 170.2 124 66.1
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.2e-40 169.9 100 78.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.2e-40 169.9 111 70.3
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 1.2e-40 169.9 100 78.0
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 2.0e-40 169.1 98 79.6
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 2.6e-40 168.7 100 78.0
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.4e-40 168.3 113 71.7
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.3e-39 166.4 107 73.8
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 2.8e-39 165.2 106 68.9
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.7e-39 164.9 100 75.0
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 4.8e-39 164.5 100 77.0
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 8.3e-39 163.7 100 75.0
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 1.1e-38 163.3 100 77.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.1e-38 163.3 112 67.0
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.1e-38 163.3 111 67.6
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.4e-38 162.9 100 77.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.4e-38 162.9 100 77.0
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.4e-38 162.9 100 75.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.4e-38 162.2 100 75.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.4e-38 162.2 111 65.8
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 3.1e-38 161.8 100 72.0
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 5.4e-38 161.0 113 66.4
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 5.4e-38 161.0 111 64.9
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 7.0e-38 160.6 100 71.0
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 7.0e-38 160.6 100 73.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.2e-37 159.8 100 72.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 1.2e-37 159.8 106 69.8
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 1.2e-37 159.8 109 67.9
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 1.2e-37 159.8 98 73.5
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.7e-37 158.7 100 71.0
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.7e-37 158.7 133 57.9
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.5e-37 158.3 100 71.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.5e-37 158.3 98 73.5
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 3.5e-37 158.3 116 66.4
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 4.5e-37 157.9 99 72.7
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 5.9e-37 157.5 111 64.9
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 5.9e-37 157.5 100 72.0
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 7.7e-37 157.1 111 63.1
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.0e-36 156.8 100 74.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.3e-36 156.4 104 68.3
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 3.8e-36 154.8 100 72.0
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 3.8e-36 154.8 100 74.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 5.0e-36 154.5 99 72.7
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 6.5e-36 154.1 102 71.6
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 6.5e-36 154.1 98 68.4
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.1e-35 153.3 100 71.0
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.9e-35 152.5 98 70.4
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.9e-35 152.5 127 60.6
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 5.5e-35 151.0 100 70.0
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 2.1e-34 149.1 96 69.8
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 4.7e-34 147.9 109 64.2
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.0e-33 145.2 91 73.6
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 4.0e-33 144.8 106 63.2
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.5e-32 142.9 108 63.9
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 3.4e-32 141.7 89 71.9
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.4e-32 141.4 85 70.6
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.8e-32 140.2 109 63.3
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 2.8e-31 138.7 84 73.8
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 3.7e-31 138.3 98 63.3
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 2.4e-30 135.6 84 76.2
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 9.2e-30 133.7 102 57.8
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 7.8e-29 130.6 100 59.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.7e-28 129.4 92 60.9
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 1.7e-28 129.4 85 65.9
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.9e-27 125.9 96 59.4
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 2.5e-27 125.6 81 70.4
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 4.7e-26 121.3 106 54.7
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 5.2e-25 117.9 75 70.7
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 7.5e-24 114.0 89 60.7
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 6.4e-23 110.9 75 66.7
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 8.3e-23 110.5 93 54.8
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 4.1e-22 108.2 101 49.5
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 2.3e-20 102.4 61 72.1
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 2.5e-19 99.0 74 58.1
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 9.5e-19 97.1 70 62.9
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 8.9e-17 90.5 68 60.3
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 5.8e-16 87.8 64 59.4
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.6e-12 74.3 60 53.3
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.6e-10 68.6 71 46.5
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 4.0e-09 65.1 65 49.2
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 1.2e-08 63.5 85 38.8
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.5e-08 63.2 36 77.8
CiPaw.16G114400 Carya illinoinensis HOM05D006119 ORTHO05D007641 1.3e-07 60.1 47 66.0


User provided reference genes

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