Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091854 Quercus lobata HOM05D007561 ORTHO05D007661 8.2e-237 823.5 480 100.0
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 3.6e-75 286.6 471 48.4
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 1.1e-47 195.3 409 40.3
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 3.2e-47 193.7 409 39.4
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 5.4e-47 193.0 431 40.4
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 2.7e-46 190.7 509 37.1
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 6.0e-46 189.5 456 39.7
Ca_08339_v3 Cicer arietinum L. HOM05D007561 ORTHO05D007661 1.9e-44 184.5 429 38.2
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 3.6e-43 180.3 452 39.8
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 5.2e-42 176.4 463 39.1
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 1.2e-41 175.3 463 39.1
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 7.6e-41 172.6 463 39.3
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 1.3e-40 171.8 430 40.5
Glyma.19G123300 Glycine max HOM05D007561 ORTHO05D007661 1.7e-40 171.4 442 37.6
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 2.2e-40 171.0 436 38.8
Thecc.05G190500 Theobroma cacao HOM05D007561 ORTHO05D007661 1.4e-39 168.3 463 35.9
Glyma.03G118900 Glycine max HOM05D007561 ORTHO05D007661 3.2e-39 167.2 451 36.8
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 1.6e-38 164.9 426 39.9
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 2.1e-38 164.5 434 37.8
Lalb_Chr22g0358291 Lupinus albus HOM05D007561 ORTHO05D007661 2.7e-38 164.1 448 35.9
Medtr7g088200 Medicago truncatula HOM05D007561 ORTHO05D007661 2.7e-38 164.1 435 38.2
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 1.7e-37 161.4 433 37.9
Psat3g083040 Pisum sativum HOM05D007561 ORTHO05D007661 1.9e-36 157.9 446 38.3
Atru.chr8.931 Acer truncatum HOM05D007561 ORTHO05D007661 9.6e-36 155.6 446 37.7
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 1.2e-35 155.2 444 38.1
Lj1g0025432 Lotus japonicus HOM05D007561 ORTHO05D007661 2.4e-34 151.0 409 36.2
MELO3C009692.2 Cucumis melo HOM05D007561 ORTHO05D007661 6.8e-34 149.4 487 33.3
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 2.0e-33 147.9 440 35.7
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 5.8e-33 146.4 417 35.3
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 7.6e-33 146.0 438 37.0
CAN.G128.129 Capsicum annuum HOM05D007561 ORTHO05D007661 1.7e-32 144.8 434 35.7
CsaV3_3G039500 Cucumis sativus L. HOM05D007561 ORTHO05D007661 2.2e-32 144.4 493 32.3
ClCG10G016860 Citrullus lanatus HOM05D007561 ORTHO05D007661 2.9e-32 144.1 475 36.2
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 2.9e-32 144.1 378 36.8
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 2.9e-32 144.1 438 34.2
Gohir.A13G114700 Gossypium hirsutum HOM05D007561 ORTHO05D007661 6.4e-32 142.9 440 36.8
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 6.4e-32 142.9 466 34.3
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 1.1e-31 142.1 453 36.2
Nitab4.5_0000811g0050 Nicotiana tabacum HOM05D007561 ORTHO05D007661 1.4e-31 141.7 440 34.8
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 1.4e-31 141.7 447 35.3
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 1.9e-31 141.4 387 38.2
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 1.9e-31 141.4 421 36.8
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 4.2e-31 140.2 437 36.4
RcHm_v2.0_Chr3g0495011 Rosa chinensis HOM05D007561 ORTHO05D007661 4.2e-31 140.2 496 33.9
GSVIVG01029894001 Vitis vinifera HOM05D007561 ORTHO05D007661 5.4e-31 139.8 411 35.5
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 9.3e-31 139.0 384 37.5
Sed0023829 Sechium edule HOM05D007561 ORTHO05D007661 1.2e-30 138.7 469 32.8
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 2.7e-30 137.5 448 34.4
TPR.G23681 Trifolium pratense HOM05D007561 ORTHO05D007661 2.7e-30 137.5 312 37.2
FAN12G2197 Fragaria x ananassa HOM05D007561 ORTHO05D007661 4.6e-30 136.7 532 33.5
Gohir.A05G393000 Gossypium hirsutum HOM05D007561 ORTHO05D007661 7.8e-30 136.0 350 37.7
FvH4_4g10470 Fragaria vesca HOM05D007561 ORTHO05D007661 1.0e-29 135.6 539 32.7
Gohir.D04G022850 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.0e-29 135.6 345 37.4
FAN17G1891 Fragaria x ananassa HOM05D007561 ORTHO05D007661 3.0e-29 134.0 528 32.4
FAN12G0994 Fragaria x ananassa HOM05D007561 ORTHO05D007661 5.1e-29 133.3 541 32.7
RhsimUnG0021900 Rhododendron simsii HOM05D007561 ORTHO05D007661 1.1e-28 132.1 492 32.1
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 1.9e-28 131.3 441 34.2
Migut.J01597 Erythranthe guttata HOM05D007561 ORTHO05D007661 2.5e-28 131.0 457 35.0
FAN07G2764 Fragaria x ananassa HOM05D007561 ORTHO05D007661 5.6e-28 129.8 503 33.6
PSO675G2416 Papaver somniferum HOM05D007561 ORTHO05D007661 5.6e-28 129.8 454 32.8
Aqoxy2G00670 Aquilegia oxysepala HOM05D007561 ORTHO05D007661 7.3e-28 129.4 463 33.7
MSTRG.6258 Avicennia marina HOM05D007561 ORTHO05D007661 7.3e-28 129.4 426 34.0
FAN22G1656 Fragaria x ananassa HOM05D007561 ORTHO05D007661 9.6e-28 129.0 545 32.7
Actinidia18379 Actinidia chinensis HOM05D007561 ORTHO05D007661 3.6e-27 127.1 509 32.4
PGR042G3351 Punica granatum HOM05D007561 ORTHO05D007661 4.8e-27 126.7 484 33.7
AUR62020949 Chenopodium quinoa HOM05D007561 ORTHO05D007661 6.2e-27 126.3 413 34.6
Peaxi162Scf00575g00079 Petunia axillaris HOM05D007561 ORTHO05D007661 1.8e-26 124.8 404 33.7
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 6.9e-26 122.9 431 33.6
AUR62018475 Chenopodium quinoa HOM05D007561 ORTHO05D007661 4.4e-25 120.2 414 34.3
MSTRG.19744 Avicennia marina HOM05D007561 ORTHO05D007661 1.7e-24 118.2 450 31.3
Eucgr.A02170 Eucalyptus grandis HOM05D007561 ORTHO05D007661 1.7e-24 118.2 444 33.6
ATR0068G026 Amborella trichopoda HOM05D007561 ORTHO05D007661 6.4e-24 116.3 407 33.4
Ah.04g149900 Amaranthus hybridus HOM05D007561 ORTHO05D007661 1.1e-23 115.5 410 32.2
SGA_v2.0_scaffold66G22349 Striga asiatica HOM05D007561 ORTHO05D007661 1.1e-23 115.5 401 32.4
HPP92_021156 Vanilla planifolia HOM05D007561 ORTHO05D007661 2.4e-23 114.4 413 32.9
CANSAT78G1013 Cannabis sativa HOM05D007561 ORTHO05D007661 5.4e-23 113.2 450 32.0
PSO339G6289 Papaver somniferum HOM05D007561 ORTHO05D007661 1.1e-20 105.5 425 31.5
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla HOM05D007561 ORTHO05D007661 2.5e-20 104.4 283 35.7
THA.LOC104816415 Tarenaya hassleriana HOM05D011214 ORTHO05D007661 7.4e-20 102.8 407 31.4
PSO384G3070 Papaver somniferum HOM05D007561 ORTHO05D007661 1.3e-19 102.1 424 32.1
PGR042G3883 Punica granatum HOM05D007561 ORTHO05D007661 1.8e-18 98.2 478 33.1
PGR142G0684 Punica granatum HOM05D007561 ORTHO05D007661 5.3e-18 96.7 384 32.8
AL6G13810 Arabidopsis lyrata HOM05D011214 ORTHO05D007661 7.6e-17 92.8 392 30.6
Sp6g38560 Schrenkiella parvula HOM05D011214 ORTHO05D007661 6.4e-16 89.7 402 31.6
CARHR209070 Cardamine hirsuta HOM05D011214 ORTHO05D007661 8.4e-16 89.4 402 30.3
AT5G04190 Arabidopsis thaliana HOM05D011214 ORTHO05D007661 1.1e-15 89.0 398 30.9
MD12G1110900 Malus domestica HOM05D007561 ORTHO05D007661 1.1e-15 89.0 464 30.6
Sc13g0000670 Simmondsia chinensis HOM05D007561 ORTHO05D007661 1.9e-15 88.2 329 31.9
BraA10t45239Z Brassica rapa HOM05D011214 ORTHO05D007661 2.4e-15 87.8 422 29.9
Phvul.004G052600 Phaseolus vulgaris HOM05D025134 ORTHO05D020753 2.4e-15 87.8 322 35.1
BcaC06g32123 Brassica carinata HOM05D011214 ORTHO05D007661 7.1e-15 86.3 424 29.5
BolC9t60006H Brassica oleracea HOM05D011214 ORTHO05D007661 1.2e-14 85.5 416 30.0
A10p31950 Brassica napus HOM05D011214 ORTHO05D007661 2.1e-14 84.7 422 30.1
C09p72660 Brassica napus HOM05D011214 ORTHO05D007661 3.5e-14 84.0 416 30.0
Carub.0006s0314 Capsella rubella HOM05D011214 ORTHO05D007661 4.6e-14 83.6 413 28.8
BcaC03g12952 Brassica carinata HOM05D011214 ORTHO05D007661 6.0e-14 83.2 385 29.6
BcaB05g21770 Brassica carinata HOM05D011214 ORTHO05D007661 7.9e-14 82.8 409 29.8
SGA_v2.0_scaffold69G23211 Striga asiatica HOM05D007561 ORTHO05D007661 7.9e-14 82.8 430 31.2
VMungo0464G1428 Vigna mungo HOM05D025134 ORTHO05D020753 7.9e-14 82.8 306 34.0
MBI15_g01650_MAGBIO Magnolia biondii HOM05D007561 ORTHO05D007661 1.3e-13 82.0 133 45.1
Migut.K00204 Erythranthe guttata HOM05D007561 ORTHO05D007661 2.3e-13 81.3 392 30.4
C02p01830 Brassica napus HOM05D011214 ORTHO05D007661 6.7e-13 79.7 388 29.4
BolC2t06140H Brassica oleracea HOM05D011214 ORTHO05D007661 6.7e-13 79.7 388 29.4
Thhalv10015710m.g Eutrema salsugineum HOM05D011214 ORTHO05D007661 2.5e-12 77.8 401 30.4
BcaC06g32122 Brassica carinata HOM05D011214 ORTHO05D007661 2.1e-11 74.7 424 28.8
CDE09G0510 Ceratophyllum demersum HOM05D044076 ORTHO05D007661 9.0e-10 69.3 369 28.2
COL.COLO4_05647 Corchorus olitorius HOM05D007561 ORTHO05D007661 1.5e-09 68.6 432 28.0
BraA02t04803Z Brassica rapa HOM05D011214 ORTHO05D007661 2.0e-09 68.2 385 27.5
CDE08G0002 Ceratophyllum demersum HOM05D044076 ORTHO05D007661 5.8e-09 66.6 359 28.1
MBI14_g08053_MAGBIO Magnolia biondii HOM05D007561 ORTHO05D007661 1.7e-08 65.1 125 46.4
SEGI_17426 Sequoiadendron giganteum HOM05D007561 ORTHO05D007661 4.2e-07 60.5 421 26.1
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 6.0e-06 56.6 290 27.9
CAN.G837.8 Capsicum annuum HOM05D002654 ORTHO05D002430 7.9e-06 56.2 270 31.1


User provided reference genes

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