Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 5.1e-218 760.8 380 100.0
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 4.0e-186 654.8 380 88.7
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.6e-102 377.1 303 66.7
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 3.6e-102 375.9 305 64.9
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 1.4e-101 374.0 303 66.7
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 6.3e-99 365.2 275 66.9
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 3.0e-93 346.3 305 60.3
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 3.3e-92 342.8 305 60.3
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 4.8e-91 339.0 288 61.1
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 7.0e-90 335.1 283 62.5
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 2.6e-89 333.2 292 63.0
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 4.5e-89 332.4 297 58.9
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 1.3e-88 330.9 286 58.7
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 1.7e-88 330.5 290 60.0
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 2.9e-88 329.7 292 59.9
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 2.9e-88 329.7 311 56.6
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 3.8e-88 329.3 296 59.8
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 8.5e-88 328.2 287 61.7
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 9.4e-87 324.7 290 61.7
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.6e-86 323.9 314 56.7
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 2.1e-86 323.6 289 61.2
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.7e-86 323.2 297 59.6
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 6.1e-86 322.0 293 59.4
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.0e-85 321.2 304 58.9
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.8e-85 320.5 292 58.9
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 3.0e-85 319.7 320 52.5
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 3.0e-85 319.7 316 56.0
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 4.0e-85 319.3 309 56.0
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 4.0e-85 319.3 314 55.1
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 1.3e-83 314.3 287 58.5
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 1.7e-83 313.9 274 60.9
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.8e-83 313.2 279 58.8
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 3.7e-83 312.8 287 58.5
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 4.8e-83 312.4 309 54.0
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 4.8e-83 312.4 279 58.8
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 8.2e-83 311.6 289 56.7
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 1.1e-82 311.2 319 54.5
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 1.4e-82 310.8 276 58.3
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.8e-82 310.5 279 58.1
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 4.1e-82 309.3 286 57.0
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 4.1e-82 309.3 316 55.1
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 5.3e-82 308.9 302 55.6
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 7.7e-81 305.1 302 53.3
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 1.0e-80 304.7 292 58.2
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 4.2e-79 299.3 269 58.7
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 2.7e-78 296.6 311 53.7
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 5.2e-77 292.4 293 53.9
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 9.8e-76 288.1 285 53.0
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 2.2e-75 287.0 282 53.9
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 5.4e-74 282.3 315 52.7
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.5e-71 274.2 289 52.6
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 3.3e-71 273.1 320 51.9
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 1.3e-67 261.2 298 48.7
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 3.1e-66 256.5 296 49.0
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 3.5e-65 253.1 282 53.2
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 4.3e-63 246.1 284 48.2
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 9.5e-63 245.0 229 57.2
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.2e-62 244.6 281 50.2
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 2.1e-62 243.8 299 51.2
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 2.3e-61 240.4 269 52.8
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 9.8e-60 235.0 256 53.5
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 8.3e-51 205.3 195 55.4
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.1e-47 194.9 275 44.4
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 8.9e-45 185.3 158 60.1
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 4.3e-39 166.4 136 62.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 7.1e-34 149.1 174 50.6
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.7e-32 144.4 118 61.9
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 9.6e-31 138.7 190 44.7
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 4.6e-25 119.8 130 55.4
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 1.3e-22 111.7 316 29.1
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.4e-20 103.6 82 67.1
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 3.4e-20 103.6 302 34.8
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 3.5e-09 67.0 79 50.6
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.3e-08 64.3 57 52.6
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 9.6e-07 58.9 81 44.4


User provided reference genes

Program Settings