Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 2.9e-71 271.9 151 100.0
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.6e-61 239.6 126 90.5
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.1e-61 239.2 127 90.6
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 4.6e-61 238.0 151 83.4
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.8e-60 236.1 149 85.9
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.8e-60 236.1 127 87.4
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 3.0e-60 235.3 127 89.0
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 5.1e-60 234.6 145 88.3
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 2.8e-58 228.8 151 87.4
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 6.2e-58 227.6 127 83.5
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 8.1e-58 227.3 151 73.5
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 3.1e-57 225.3 127 83.5
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 6.9e-57 224.2 127 82.7
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 2.0e-56 222.6 149 74.5
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 2.0e-56 222.6 127 82.7
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.0e-56 222.6 149 79.9
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.4e-56 221.9 127 82.7
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 5.8e-56 221.1 127 83.5
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 7.6e-56 220.7 127 81.9
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 7.6e-56 220.7 127 81.9
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 7.6e-56 220.7 127 81.9
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 7.6e-56 220.7 146 80.1
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 9.9e-56 220.3 127 81.9
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.3e-55 219.9 127 82.7
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.3e-55 219.9 153 82.4
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.3e-55 219.9 127 82.7
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.1e-54 216.9 129 80.6
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 4.2e-54 214.9 151 76.8
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 7.1e-54 214.2 118 85.6
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 9.3e-54 213.8 121 83.5
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-53 213.4 152 77.6
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 2.1e-53 212.6 149 77.9
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.5e-53 211.8 152 77.0
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 7.9e-53 210.7 125 78.4
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.9e-53 210.7 150 76.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 3.0e-52 208.8 126 77.0
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 3.0e-52 208.8 127 78.7
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.1e-52 208.0 122 79.5
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 5.1e-52 208.0 127 77.2
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 6.7e-52 207.6 125 77.6
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 8.7e-52 207.2 122 79.5
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 8.7e-52 207.2 122 79.5
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-51 206.8 126 76.2
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 3.3e-51 205.3 125 79.2
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 4.3e-51 204.9 127 75.6
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 5.6e-51 204.5 121 80.2
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.4e-51 204.1 127 76.4
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.6e-50 203.0 118 80.5
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 2.1e-50 202.6 126 76.2
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 2.8e-50 202.2 125 77.6
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.7e-50 201.8 145 76.6
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.7e-50 201.8 127 76.4
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 6.2e-50 201.1 149 75.2
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 8.1e-50 200.7 148 76.4
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.2e-48 196.8 125 76.8
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 1.5e-48 196.4 127 74.8
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 2.0e-48 196.1 127 75.6
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 3.4e-48 195.3 128 75.8
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.4e-48 195.3 151 70.2
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 7.6e-48 194.1 152 69.7
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 8.4e-47 190.7 127 73.2
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.4e-46 189.9 173 56.6
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.4e-46 189.9 126 72.2
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 3.2e-46 188.7 127 71.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 4.2e-46 188.3 127 72.4
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 7.1e-46 187.6 119 75.6
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.2e-45 186.8 127 73.2
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 1.6e-45 186.4 126 71.4
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.6e-45 186.4 113 73.5
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 2.7e-45 185.7 127 70.1
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 2.7e-45 185.7 170 60.0
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 3.5e-45 185.3 126 70.6
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 4.6e-45 184.9 128 70.3
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 4.6e-45 184.9 100 86.0
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 4.6e-45 184.9 126 69.8
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 6.0e-45 184.5 151 68.9
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 7.9e-45 184.1 126 70.6
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 7.9e-45 184.1 126 70.6
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 7.9e-45 184.1 126 70.6
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 7.9e-45 184.1 126 70.6
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 7.9e-45 184.1 126 69.8
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.0e-44 183.7 127 69.3
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.0e-44 183.7 127 66.9
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.3e-44 183.3 126 70.6
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 2.3e-44 182.6 127 67.7
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.3e-44 182.6 125 70.4
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 2.3e-44 182.6 126 69.0
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 3.0e-44 182.2 131 75.6
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.9e-44 181.8 107 80.4
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 5.1e-44 181.4 127 70.1
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.1e-44 181.4 126 69.0
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 1.1e-43 180.3 126 69.0
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.1e-43 180.3 127 70.1
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.1e-43 180.3 151 63.6
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.5e-43 179.9 127 69.3
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 1.9e-43 179.5 125 68.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 5.7e-43 177.9 120 70.8
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 7.4e-43 177.6 127 66.1
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 9.6e-43 177.2 125 69.6
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.1e-42 176.0 122 68.0
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 3.7e-42 175.3 118 66.9
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 3.7e-42 175.3 104 78.8
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.7e-42 175.3 104 78.8
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 6.3e-42 174.5 126 68.3
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.8e-41 172.9 148 68.2
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.4e-41 172.6 122 67.2
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.2e-40 170.2 99 79.8
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 3.4e-40 168.7 127 67.7
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 7.6e-40 167.5 125 65.6
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 1.7e-39 166.4 119 66.4
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 2.5e-38 162.5 122 63.1
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 6.1e-37 157.9 123 65.9
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 3.0e-36 155.6 122 63.9
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 4.3e-35 151.8 84 83.3
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.8e-33 146.4 106 66.0
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.4e-27 125.2 78 71.8
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.7e-26 123.2 101 55.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.4e-25 120.2 101 51.5
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 4.1e-25 118.6 85 69.4
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 2.2e-23 112.8 101 50.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 3.8e-23 112.1 61 83.6
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.5e-23 111.3 93 74.2
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 1.4e-22 110.2 101 50.5
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 5.5e-22 108.2 67 74.6
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 6.1e-21 104.8 67 74.6
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 6.1e-21 104.8 98 52.0
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.4e-20 103.6 61 75.4
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 5.2e-20 101.7 63 71.4
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 8.8e-20 100.9 61 75.4
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.1e-17 94.0 61 70.5
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 2.6e-16 89.4 85 51.8
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 8.5e-15 84.3 57 66.7
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.8e-12 76.6 49 75.5
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.8e-09 66.6 60 58.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 3.1e-09 65.9 34 85.3
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.2e-08 63.9 48 54.2
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 2.7e-08 62.8 96 33.3
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 3.8e-07 58.9 98 28.6


User provided reference genes

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