Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091472 Quercus lobata HOM05D000625 ORTHO05D000467 2.2e-36 155.2 85 100.0
QL06p047072 Quercus lobata HOM05D000625 ORTHO05D000467 1.8e-25 119.0 72 93.1
Haze_15065 Corylus avellana HOM05D000625 ORTHO05D010258 9.0e-14 80.1 72 68.1
Potri.005G120700 Populus trichocarpa HOM05D000625 ORTHO05D000467 8.5e-12 73.6 82 54.9
CiPaw.01G044200 Carya illinoinensis HOM05D000625 ORTHO05D000467 1.1e-11 73.2 80 58.8
Potri.007G022600 Populus trichocarpa HOM05D000625 ORTHO05D000467 1.4e-11 72.8 82 53.7
Sabra05G0099500 Salix brachista HOM05D000625 ORTHO05D000467 2.5e-11 72.0 82 54.9
CANSAT01G2037 Cannabis sativa HOM05D000625 ORTHO05D000467 9.4e-11 70.1 67 64.2
MD00G1129800 Malus domestica HOM05D000625 ORTHO05D000467 1.6e-10 69.3 72 59.7
MD15G1257600 Malus domestica HOM05D000625 ORTHO05D000467 1.6e-10 69.3 72 59.7
CiPaw.02G019900 Carya illinoinensis HOM05D000625 ORTHO05D000467 4.6e-10 67.8 80 53.8
Atru.chr3.621 Acer truncatum HOM05D000625 ORTHO05D000467 7.9e-10 67.0 72 56.9
FvH4_1g12901 Fragaria vesca HOM05D000625 ORTHO05D000467 7.9e-10 67.0 77 48.1
Manes.02G096000 Manihot esculenta HOM05D000625 ORTHO05D000467 7.9e-10 67.0 73 60.3
Prupe.7G157600 Prunus persica HOM05D000625 ORTHO05D000467 7.9e-10 67.0 72 54.2
FAN23G2045 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.4e-09 66.2 77 48.1
TWI09G0793 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 1.4e-09 66.2 71 60.6
FAN19G0391 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.8e-09 65.9 77 48.1
Manes.01G137600 Manihot esculenta HOM05D000625 ORTHO05D000467 1.8e-09 65.9 72 56.9
Sabra07G0019700 Salix brachista HOM05D000625 ORTHO05D000467 1.8e-09 65.9 82 51.2
Sed0010746 Sechium edule HOM05D000625 ORTHO05D000467 2.3e-09 65.5 72 58.3
Sed0026766 Sechium edule HOM05D000625 ORTHO05D000467 3.0e-09 65.1 82 48.8
ClCG01G019710 Citrullus lanatus HOM05D000625 ORTHO05D000467 5.1e-09 64.3 72 58.3
MELO3C007839.2 Cucumis melo HOM05D000625 ORTHO05D000467 8.8e-09 63.5 72 56.9
FAN28G1818 Fragaria x ananassa HOM05D000625 ORTHO05D000467 8.8e-09 63.5 77 46.8
Gohir.D11G189600 Gossypium hirsutum HOM05D000625 ORTHO05D000467 1.1e-08 63.2 81 48.1
Gorai.007G201800 Gossypium raimondii HOM05D000625 ORTHO05D000467 1.1e-08 63.2 81 48.1
CsaV3_6G046420 Cucumis sativus L. HOM05D000625 ORTHO05D000467 3.3e-08 61.6 72 52.8
FAN26G1406 Fragaria x ananassa HOM05D000625 ORTHO05D000467 3.3e-08 61.6 77 44.2
PGR102G1850 Punica granatum HOM05D000625 ORTHO05D000467 4.3e-08 61.2 72 55.6
Duzib147G0259 Durio zibethinus HOM05D000625 ORTHO05D000467 5.7e-08 60.8 72 50.0
Dinv13499 Davidia involucrata HOM05D000625 ORTHO05D000467 7.4e-08 60.5 81 54.3
Duzib187G1890 Durio zibethinus HOM05D000625 ORTHO05D000467 7.4e-08 60.5 80 45.0
TAR381G1253 Trochodendron aralioides HOM05D000625 ORTHO05D000467 7.4e-08 60.5 72 52.8
Psat4g094640 Pisum sativum HOM05D000625 ORTHO05D000467 9.7e-08 60.1 72 54.2
THA.LOC104804238 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 9.7e-08 60.1 73 50.7
Lj2A456T55 Lonicera japonica HOM05D000625 ORTHO05D000467 1.3e-07 59.7 70 58.6
THA.LOC104820189 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 1.3e-07 59.7 72 51.4
Thecc.01G032000 Theobroma cacao HOM05D000625 ORTHO05D000467 1.3e-07 59.7 80 46.2
TWI73G0600 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 1.3e-07 59.7 81 50.6
COL.COLO4_22044 Corchorus olitorius HOM05D000625 ORTHO05D000467 1.7e-07 59.3 74 51.4
Thhalv10024218m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 1.7e-07 59.3 72 51.4
arahy.Tifrunner.gnm1.ann1.9VM2YS Arachis hypogaea HOM05D000625 ORTHO05D000467 2.2e-07 58.9 72 55.6
arahy.Tifrunner.gnm1.ann1.GIVS0W Arachis hypogaea HOM05D000625 ORTHO05D000467 2.2e-07 58.9 72 55.6
Dinv40006 Davidia involucrata HOM05D000625 ORTHO05D000467 2.2e-07 58.9 80 50.0
CAN.G358.56 Capsicum annuum HOM05D000625 ORTHO05D000467 2.8e-07 58.5 80 42.5
Sp7g34170 Schrenkiella parvula HOM05D000625 ORTHO05D000467 2.8e-07 58.5 72 51.4
ECA246G3280 Erigeron canadensis HOM05D000625 ORTHO05D000467 4.8e-07 57.8 80 43.8
PGSC0003DMG400003516 Solanum tuberosum HOM05D000625 ORTHO05D000467 4.8e-07 57.8 80 40.0
TPR.G24117 Trifolium pratense HOM05D000625 ORTHO05D000467 4.8e-07 57.8 72 52.8
AT4G36520 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 6.3e-07 57.4 72 45.8
DCAR_025958 Daucus carota HOM05D000625 ORTHO05D000467 6.3e-07 57.4 67 50.7
Lalb_Chr16g0391071 Lupinus albus HOM05D000625 ORTHO05D000467 6.3e-07 57.4 72 51.4
RcHm_v2.0_Chr2g0100991 Rosa chinensis HOM05D000625 ORTHO05D000467 6.3e-07 57.4 75 48.0
GSVIVG01018928001 Vitis vinifera HOM05D000625 ORTHO05D000467 6.3e-07 57.4 72 51.4
CSS0033645 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 8.2e-07 57.0 80 45.0
Nn1g04932 Nelumbo nucifera HOM05D000625 ORTHO05D000467 8.2e-07 57.0 67 53.7
TAR628G0252 Trochodendron aralioides HOM05D000625 ORTHO05D000467 8.2e-07 57.0 72 47.2
Aa31LG6G13300 Aethionema arabicum HOM05D000625 ORTHO05D000467 1.4e-06 56.2 72 48.6
Lsat_1_v5_gn_3_75961 Lactuca sativa HOM05D000625 ORTHO05D000467 1.4e-06 56.2 67 50.7
Medtr8g077150 Medicago truncatula HOM05D000625 ORTHO05D000467 2.4e-06 55.5 72 48.6
Oeu063198.2 Olea europaea HOM05D000625 ORTHO05D000467 2.4e-06 55.5 82 45.1
Sopen02g029730 Solanum pennellii HOM05D000625 ORTHO05D000467 2.4e-06 55.5 80 40.0
CARHR244830 Cardamine hirsuta HOM05D000625 ORTHO05D000467 3.1e-06 55.1 72 47.2
Ca_22292_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 4.1e-06 54.7 72 50.0
Ca_22322_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 4.1e-06 54.7 72 50.0
Gohir.A02G166900 Gossypium hirsutum HOM05D000625 ORTHO05D000467 4.1e-06 54.7 81 42.0
HanXRQChr16g0530651 Helianthus annuus HOM05D000625 ORTHO05D000467 4.1e-06 54.7 80 46.2
Actinidia19937 Actinidia chinensis HOM05D000625 ORTHO05D000467 5.3e-06 54.3 80 43.8
Phvul.003G255200 Phaseolus vulgaris HOM05D000625 ORTHO05D000467 5.3e-06 54.3 72 44.4
CSS0045130 Camellia sinensis var. sinensis HOM05D000625 ORTHO05D000467 6.9e-06 53.9 80 43.8
Gohir.D03G013100 Gossypium hirsutum HOM05D000625 ORTHO05D000467 6.9e-06 53.9 81 42.0
Gorai.003G013400 Gossypium raimondii HOM05D000625 ORTHO05D000467 6.9e-06 53.9 81 42.0
AL7G14550 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 9.1e-06 53.5 72 45.8


User provided reference genes

Program Settings