Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091284 Quercus lobata HOM05D001431 ORTHO05D001268 3.8e-57 224.6 110 100.0
QL02p091314 Quercus lobata HOM05D001431 ORTHO05D001268 3.9e-33 144.8 119 60.5
QL02p091271 Quercus lobata HOM05D001431 ORTHO05D001268 1.7e-28 129.4 120 57.5
Cfa020891 Carpinus fangiana HOM05D001431 ORTHO05D001268 3.9e-17 91.7 120 44.2
CiPaw.15G181700 Carya illinoinensis HOM05D001431 ORTHO05D001268 6.6e-17 90.9 118 47.5
CsaV3_1G028510 Cucumis sativus L. HOM05D001431 ORTHO05D001268 3.3e-16 88.6 119 42.9
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 5.6e-16 87.8 119 42.0
ClCG06G012050 Citrullus lanatus HOM05D001431 ORTHO05D001268 8.1e-15 84.0 119 40.3
Haze_19319 Corylus avellana HOM05D001431 ORTHO05D001268 1.4e-14 83.2 123 43.9
Glyma.17G105000 Glycine max HOM05D001431 ORTHO05D001268 6.9e-14 80.9 117 41.0
TWI34G1362 Tripterygium wilfordii HOM05D001431 ORTHO05D001268 9.0e-14 80.5 120 38.3
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 3.4e-13 78.6 118 39.8
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 7.6e-13 77.4 112 38.4
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 9.9e-13 77.0 112 38.4
Gohir.A06G099800 Gossypium hirsutum HOM05D001431 ORTHO05D001268 1.7e-12 76.3 112 38.4
Manes.03G011900 Manihot esculenta HOM05D001431 ORTHO05D001268 2.9e-12 75.5 108 40.7
TPR.G22802 Trifolium pratense HOM05D001431 ORTHO05D001268 4.9e-12 74.7 109 42.2
Gohir.A06G050000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 6.4e-12 74.3 114 39.5
Lalb_Chr11g0072871 Lupinus albus HOM05D001431 ORTHO05D001268 8.4e-12 73.9 105 41.9
Gorai.010G056200 Gossypium raimondii HOM05D001431 ORTHO05D001268 1.1e-11 73.6 114 39.5
Glyma.13G157400 Glycine max HOM05D001431 ORTHO05D001268 1.9e-11 72.8 113 37.2
Manes.16G126000 Manihot esculenta HOM05D001431 ORTHO05D001268 5.4e-11 71.2 116 36.2
Sed0026439 Sechium edule HOM05D001431 ORTHO05D001268 5.4e-11 71.2 109 36.7
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 7.1e-11 70.9 119 31.9
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 1.2e-10 70.1 119 37.0
Potri.018G114200 Populus trichocarpa HOM05D001431 ORTHO05D001268 1.2e-10 70.1 113 37.2
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 1.2e-10 70.1 104 38.5
Glyma.09G095800 Glycine max HOM05D001431 ORTHO05D001268 2.7e-10 68.9 110 37.3
Lj6g0025598 Lotus japonicus HOM05D001431 ORTHO05D001268 2.7e-10 68.9 110 39.1
Medtr4g116530 Medicago truncatula HOM05D001431 ORTHO05D001268 2.7e-10 68.9 118 36.4
Psat0ss25082g0080 Pisum sativum HOM05D001431 ORTHO05D001268 2.7e-10 68.9 110 40.0
Psat4g033120 Pisum sativum HOM05D001431 ORTHO05D001268 2.7e-10 68.9 121 36.4
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 2.7e-10 68.9 112 36.6
Ca_27061_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 3.5e-10 68.6 110 40.9
COL.COLO4_24101 Corchorus olitorius HOM05D001431 ORTHO05D001268 3.5e-10 68.6 119 36.1
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 3.5e-10 68.6 120 34.2
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 4.6e-10 68.2 114 36.0
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 4.6e-10 68.2 119 31.1
Sabra18G0097100 Salix brachista HOM05D001431 ORTHO05D001268 6.0e-10 67.8 117 36.8
Phvul.003G174800 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 7.8e-10 67.4 108 37.0
TPR.G15780 Trifolium pratense HOM05D001431 ORTHO05D001268 7.8e-10 67.4 112 37.5
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 7.8e-10 67.4 117 34.2
Lalb_Chr07g0179511 Lupinus albus HOM05D001431 ORTHO05D001268 1.0e-09 67.0 112 38.4
Medtr2g461190 Medicago truncatula HOM05D001431 ORTHO05D001268 1.0e-09 67.0 109 38.5
arahy.Tifrunner.gnm1.ann1.KMWM4V Arachis hypogaea HOM05D001431 ORTHO05D001268 1.3e-09 66.6 119 35.3
Glyma.15G202100 Glycine max HOM05D001431 ORTHO05D001268 1.3e-09 66.6 109 36.7
Hma1.2p1_0949F.1_g240600 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.3e-09 66.6 113 38.1
Hma1.2p1_1784F.1_g302160 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.3e-09 66.6 113 38.1
Ciclev10010491m.g Citrus clementina HOM05D001431 ORTHO05D001268 3.9e-09 65.1 101 37.6
VMungo1309G2763 Vigna mungo HOM05D001431 ORTHO05D001268 3.9e-09 65.1 105 39.0
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 6.6e-09 64.3 120 31.7
Prupe.7G254800 Prunus persica HOM05D001431 ORTHO05D001268 1.5e-08 63.2 126 35.7
Rhsim03G0254500 Rhododendron simsii HOM05D001431 ORTHO05D001268 1.9e-08 62.8 114 36.8
CSS0009490 Camellia sinensis var. sinensis HOM05D001431 ORTHO05D001268 2.5e-08 62.4 103 40.8
HanXRQChr03g0064021 Helianthus annuus HOM05D001431 ORTHO05D001268 2.5e-08 62.4 118 35.6
Sed0005869 Sechium edule HOM05D001431 ORTHO05D001268 5.6e-08 61.2 110 39.1
VMungo1215G3003 Vigna mungo HOM05D001431 ORTHO05D001268 5.6e-08 61.2 89 40.4
MBI15_g10642_MAGBIO Magnolia biondii HOM05D001431 ORTHO05D001268 7.3e-08 60.8 107 36.4
Oeu042713.1 Olea europaea HOM05D001431 ORTHO05D001268 7.3e-08 60.8 115 35.7
HanXRQChr06g0181721 Helianthus annuus HOM05D001431 ORTHO05D001268 9.6e-08 60.5 92 39.1
Ah.09g223880 Amaranthus hybridus HOM05D001431 ORTHO05D001268 1.3e-07 60.1 114 36.8
Duzib187G1758 Durio zibethinus HOM05D001431 ORTHO05D001268 1.3e-07 60.1 103 38.8
HanXRQChr05g0137941 Helianthus annuus HOM05D001431 ORTHO05D001268 1.3e-07 60.1 115 38.3
Lsat_1_v5_gn_7_47921 Lactuca sativa HOM05D001431 ORTHO05D001268 1.3e-07 60.1 121 33.1
Phvul.009G209600 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 1.6e-07 59.7 113 34.5
CiPaw.07G227000 Carya illinoinensis HOM05D001431 ORTHO05D001268 2.8e-07 58.9 115 35.7
EL10Ac8g18816 Beta vulgaris HOM05D001431 ORTHO05D001268 3.6e-07 58.5 115 38.3
Actinidia14101 Actinidia chinensis HOM05D001431 ORTHO05D001268 4.8e-07 58.2 108 38.9
Nn8g39717 Nelumbo nucifera HOM05D001431 ORTHO05D001268 4.8e-07 58.2 111 36.0
Peaxi162Scf00391g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 6.2e-07 57.8 111 31.5
Potri.006G190100 Populus trichocarpa HOM05D001431 ORTHO05D001268 6.2e-07 57.8 102 34.3
Ah.14g078760 Amaranthus hybridus HOM05D001431 ORTHO05D001268 8.1e-07 57.4 115 36.5
Hma1.2p1_0182F.1_g080500 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.1e-06 57.0 119 33.6
Phvul.003G198600 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 1.1e-06 57.0 63 44.4
ECA240G3019 Erigeron canadensis HOM05D001431 ORTHO05D001268 1.4e-06 56.6 122 30.3
Nitab4.5_0011752g0010 Nicotiana tabacum HOM05D001431 ORTHO05D001268 1.8e-06 56.2 87 34.5
EL10Ac5g10788 Beta vulgaris HOM05D001431 ORTHO05D001268 2.4e-06 55.8 65 46.2
PGR142G0349 Punica granatum HOM05D001431 ORTHO05D001268 2.4e-06 55.8 123 35.0
RcHm_v2.0_Chr2g0086671 Rosa chinensis HOM05D001431 ORTHO05D001268 2.4e-06 55.8 128 33.6
ECA236G0145 Erigeron canadensis HOM05D001431 ORTHO05D001268 3.1e-06 55.5 92 33.7
Sc18g0000050 Simmondsia chinensis HOM05D001431 ORTHO05D001268 3.1e-06 55.5 63 44.4
Glyma.17G091400 Glycine max HOM05D001431 ORTHO05D001268 4.0e-06 55.1 65 44.6
PGSC0003DMG400007820 Solanum tuberosum HOM05D001431 ORTHO05D001268 4.0e-06 55.1 108 35.2
CSS0029436 Camellia sinensis var. sinensis HOM05D001431 ORTHO05D001268 5.3e-06 54.7 93 37.6
VMungo1215G3018 Vigna mungo HOM05D001431 ORTHO05D001268 5.3e-06 54.7 63 44.4
ATR0629G087 Amborella trichopoda HOM05D001431 ORTHO05D001268 6.9e-06 54.3 108 33.3
CANSAT11G0265 Cannabis sativa HOM05D001431 ORTHO05D001268 9.0e-06 53.9 70 44.3
CDE10G0680 Ceratophyllum demersum HOM05D001431 ORTHO05D001268 9.0e-06 53.9 63 46.0


User provided reference genes

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