Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091243 Quercus lobata HOM05D003969 ORTHO05D003125 3.8e-70 268.5 182 100.0
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.1e-14 82.0 155 38.1
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 6.7e-14 81.6 150 38.7
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.9e-13 80.1 149 38.3
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.9e-13 80.1 149 38.3
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.9e-13 80.1 150 37.3
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.5e-13 79.7 154 37.7
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 9.6e-13 77.8 150 38.7
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.6e-12 77.0 150 36.7
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 8.1e-12 74.7 154 35.7
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-11 74.3 149 36.2
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 1.8e-11 73.6 97 43.3
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 1.8e-11 73.6 97 43.3
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 3.1e-11 72.8 150 40.0
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 3.1e-11 72.8 150 40.0
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 4.0e-11 72.4 150 34.7
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.2e-10 70.9 155 36.1
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.5e-10 70.5 156 36.5
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 2.6e-10 69.7 130 41.5
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 3.4e-10 69.3 117 48.7
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 5.8e-10 68.6 139 33.8
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 5.8e-10 68.6 154 34.4
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 7.6e-10 68.2 173 30.6
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 7.6e-10 68.2 176 40.3
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 9.9e-10 67.8 124 37.1
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 9.9e-10 67.8 150 35.3
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.7e-09 67.0 145 33.8
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 3.8e-09 65.9 157 36.3
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 3.8e-09 65.9 157 31.8
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 6.4e-09 65.1 173 32.4
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 6.4e-09 65.1 151 33.8
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 8.4e-09 64.7 154 33.8
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 8.4e-09 64.7 150 35.3
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 1.4e-08 63.9 154 35.7
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 1.9e-08 63.5 142 43.7
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 1.9e-08 63.5 161 32.9
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 2.4e-08 63.2 145 33.1
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.4e-08 63.2 165 32.1
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 3.2e-08 62.8 151 33.8
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 3.2e-08 62.8 104 41.3
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 4.2e-08 62.4 155 36.8
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 4.2e-08 62.4 155 36.8
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 4.2e-08 62.4 149 33.6
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 5.5e-08 62.0 160 31.9
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 5.5e-08 62.0 152 36.2
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 7.1e-08 61.6 166 34.3
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 9.3e-08 61.2 165 34.5
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 9.3e-08 61.2 151 35.8
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 9.3e-08 61.2 151 35.8
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 9.3e-08 61.2 154 35.7
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 9.3e-08 61.2 155 31.0
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.2e-07 60.8 155 36.1
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 1.2e-07 60.8 167 32.3
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.6e-07 60.5 155 38.1
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 1.6e-07 60.5 96 39.6
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 1.6e-07 60.5 96 39.6
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 1.6e-07 60.5 151 31.8
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 2.1e-07 60.1 96 38.5
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 2.1e-07 60.1 96 38.5
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.1e-07 60.1 153 30.7
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 2.1e-07 60.1 149 30.9
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 2.1e-07 60.1 149 32.2
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 2.7e-07 59.7 162 30.9
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.7e-07 59.7 168 32.7
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 2.7e-07 59.7 150 34.7
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 2.7e-07 59.7 146 29.5
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 2.7e-07 59.7 171 33.3
PGR142G4289 Punica granatum HOM05D003969 ORTHO05D003125 2.7e-07 59.7 152 36.2
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 3.5e-07 59.3 165 31.5
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 3.5e-07 59.3 147 31.3
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 3.5e-07 59.3 152 34.9
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 4.6e-07 58.9 136 31.6
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 4.6e-07 58.9 147 33.3
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 4.6e-07 58.9 108 39.8
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 6.0e-07 58.5 105 41.0
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 6.0e-07 58.5 147 31.3
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 6.0e-07 58.5 151 30.5
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 7.9e-07 58.2 161 36.0
THA.LOC104808923 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 7.9e-07 58.2 168 29.2
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 7.9e-07 58.2 152 32.2
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.0e-06 57.8 136 32.4
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.0e-06 57.8 147 30.6
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.3e-06 57.4 147 33.3
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.3e-06 57.4 147 30.6
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 1.3e-06 57.4 149 32.2
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 1.8e-06 57.0 150 29.3
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.8e-06 57.0 127 36.2
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 1.8e-06 57.0 159 33.3
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 2.3e-06 56.6 164 31.7
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 2.3e-06 56.6 146 30.1
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 2.3e-06 56.6 157 30.6
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 2.3e-06 56.6 148 31.1
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.3e-06 56.6 90 40.0
Aqoxy7G00610 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 3.0e-06 56.2 85 41.2
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 3.0e-06 56.2 146 31.5
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.0e-06 56.2 147 32.7
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.9e-06 55.8 161 32.9
PSO384G4887 Papaver somniferum HOM05D000107 ORTHO05D000062 3.9e-06 55.8 69 47.8
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 5.1e-06 55.5 148 31.1
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 5.1e-06 55.5 148 30.4
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 6.7e-06 55.1 90 37.8
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 6.7e-06 55.1 148 31.1
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 8.7e-06 54.7 150 32.7
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 8.7e-06 54.7 150 32.7
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 8.7e-06 54.7 155 32.9
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 8.7e-06 54.7 105 33.3


User provided reference genes

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