Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091214 Quercus lobata HOM05D003638 ORTHO05D003202 1.4e-78 296.2 145 100.0
Duzib168G1473 Durio zibethinus HOM05D003638 ORTHO05D003202 2.0e-29 132.9 154 51.3
QL02p091197 Quercus lobata HOM05D003638 ORTHO05D003202 7.6e-29 131.0 154 50.6
CiPaw.16G118000 Carya illinoinensis HOM05D003638 ORTHO05D003202 2.2e-28 129.4 154 47.4
Thecc.09G141300 Theobroma cacao HOM05D003638 ORTHO05D003202 2.2e-28 129.4 154 50.0
Cfa020896 Carpinus fangiana HOM05D003638 ORTHO05D003202 4.2e-27 125.2 154 46.1
Cpa.g.sc46.85 Carica papaya HOM05D003638 ORTHO05D003202 7.1e-27 124.4 156 48.7
Duzib187G0526 Durio zibethinus HOM05D003638 ORTHO05D003202 1.2e-26 123.6 155 49.0
Manes.06G041300 Manihot esculenta HOM05D003638 ORTHO05D003202 7.9e-26 120.9 154 45.5
RcHm_v2.0_Chr2g0086711 Rosa chinensis HOM05D003638 ORTHO05D003202 1.3e-25 120.2 163 52.1
Potri.018G114500 Populus trichocarpa HOM05D003638 ORTHO05D003202 1.8e-25 119.8 160 43.8
Gohir.A08G095362 Gossypium hirsutum HOM05D003638 ORTHO05D003202 3.9e-25 118.6 154 46.1
FvH4_1g01750 Fragaria vesca HOM05D003638 ORTHO05D003202 6.7e-25 117.9 163 49.7
vmacro21884 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 6.7e-25 117.9 157 45.9
CiPaw.15G182800 Carya illinoinensis HOM05D003638 ORTHO05D003202 1.9e-24 116.3 155 47.1
FAN23G0723 Fragaria x ananassa HOM05D003638 ORTHO05D003202 1.9e-24 116.3 165 50.3
FAN26G1151 Fragaria x ananassa HOM05D003638 ORTHO05D003202 1.9e-24 116.3 165 50.3
FAN28G0590 Fragaria x ananassa HOM05D003638 ORTHO05D003202 3.3e-24 115.5 163 47.9
TWI63G0270 Tripterygium wilfordii HOM05D003638 ORTHO05D003202 5.6e-24 114.8 149 43.6
FAN19G2555 Fragaria x ananassa HOM05D003638 ORTHO05D003202 9.6e-24 114.0 163 47.9
Sabra18G0097400 Salix brachista HOM05D003638 ORTHO05D003202 9.6e-24 114.0 157 40.1
TAR626G0601 Trochodendron aralioides HOM05D003638 ORTHO05D003202 9.6e-24 114.0 160 46.2
Lalb_Chr23g0275841 Lupinus albus HOM05D003638 ORTHO05D003202 1.6e-23 113.2 149 43.0
Potri.006G190300 Populus trichocarpa HOM05D003638 ORTHO05D003202 1.6e-23 113.2 170 40.6
Haze_19323 Corylus avellana HOM05D003638 ORTHO05D003202 6.2e-23 111.3 145 46.2
MD15G1160000 Malus domestica HOM05D003638 ORTHO05D003202 8.2e-23 110.9 164 45.7
MD02G1013200 Malus domestica HOM05D003638 ORTHO05D003202 1.1e-22 110.5 164 43.9
Actinidia21912 Actinidia chinensis HOM05D003638 ORTHO05D003202 1.8e-22 109.8 155 40.6
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 2.4e-22 109.4 154 42.2
Actinidia04244 Actinidia chinensis HOM05D003638 ORTHO05D003202 6.9e-22 107.8 158 43.7
Haze_19322 Corylus avellana HOM05D003638 ORTHO05D003202 1.5e-21 106.7 150 47.3
Ciclev10009499m.g Citrus clementina HOM05D003638 ORTHO05D003202 2.0e-21 106.3 157 40.8
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 2.0e-21 106.3 155 41.9
TAR383G0618 Trochodendron aralioides HOM05D003638 ORTHO05D003202 3.4e-21 105.5 156 41.7
Cfa020895 Carpinus fangiana HOM05D003638 ORTHO05D003202 5.8e-21 104.8 153 46.4
Sopen07g003210 Solanum pennellii HOM05D003638 ORTHO05D003202 5.8e-21 104.8 154 42.9
Rhsim01G0052400 Rhododendron simsii HOM05D003638 ORTHO05D003202 7.6e-21 104.4 156 42.9
Duzib187G0899 Durio zibethinus HOM05D003638 ORTHO05D003202 1.0e-20 104.0 151 45.0
CANSAT11G2120 Cannabis sativa HOM05D003638 ORTHO05D003202 1.3e-20 103.6 164 47.0
Solyc07g007160.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 1.3e-20 103.6 154 42.2
Dinv41427 Davidia involucrata HOM05D003638 ORTHO05D003202 1.7e-20 103.2 165 43.6
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 3.8e-20 102.1 151 40.4
Phvul.009G209800 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 3.8e-20 102.1 154 42.9
PGSC0003DMG401030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 3.8e-20 102.1 154 42.9
BcaB03g16305 Brassica carinata HOM05D003638 ORTHO05D003202 4.9e-20 101.7 162 43.8
BcaB03g16307 Brassica carinata HOM05D003638 ORTHO05D003202 4.9e-20 101.7 162 43.8
Duzib150G0024 Durio zibethinus HOM05D003638 ORTHO05D003202 6.5e-20 101.3 154 43.5
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 6.5e-20 101.3 157 42.7
Peaxi162Scf00391g00019 Petunia axillaris HOM05D003638 ORTHO05D003202 1.1e-19 100.5 159 43.4
BcaC06g36068 Brassica carinata HOM05D003638 ORTHO05D003202 1.4e-19 100.1 162 43.2
C07p08290 Brassica napus HOM05D003638 ORTHO05D003202 1.4e-19 100.1 162 43.2
BolC7t41242H Brassica oleracea HOM05D003638 ORTHO05D003202 1.4e-19 100.1 162 43.2
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla HOM05D003638 ORTHO05D003202 1.4e-19 100.1 156 41.7
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 1.9e-19 99.8 149 39.6
Dinv42915 Davidia involucrata HOM05D003638 ORTHO05D003202 2.5e-19 99.4 156 42.9
Dinv43185 Davidia involucrata HOM05D003638 ORTHO05D003202 2.5e-19 99.4 156 42.9
Dinv22136 Davidia involucrata HOM05D003638 ORTHO05D003202 3.2e-19 99.0 156 42.3
BraA07t28311Z Brassica rapa HOM05D003638 ORTHO05D003202 4.2e-19 98.6 162 42.6
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 5.5e-19 98.2 157 40.1
MBI15_g25866_MAGBIO Magnolia biondii HOM05D003638 ORTHO05D003202 7.1e-19 97.8 162 40.7
CSS0003684 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 9.3e-19 97.4 163 42.3
CSS0017335 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 1.2e-18 97.1 155 40.0
CSS0018942 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 1.6e-18 96.7 163 42.3
Lalb_Chr08g0233671 Lupinus albus HOM05D003638 ORTHO05D003202 1.6e-18 96.7 151 43.0
AL3G47340 Arabidopsis lyrata HOM05D003638 ORTHO05D003202 2.7e-18 95.9 159 42.8
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea HOM05D003638 ORTHO05D003202 2.7e-18 95.9 156 40.4
Sp3g28870 Schrenkiella parvula HOM05D003638 ORTHO05D003202 2.7e-18 95.9 162 42.0
Aqoxy7G03537 Aquilegia oxysepala HOM05D003638 ORTHO05D003202 3.5e-18 95.5 156 41.7
A07p05140 Brassica napus HOM05D003638 ORTHO05D003202 3.5e-18 95.5 162 42.0
GSVIVG01012890001 Vitis vinifera HOM05D003638 ORTHO05D003202 3.5e-18 95.5 102 56.9
Thhalv10022864m.g Eutrema salsugineum HOM05D003638 ORTHO05D003202 1.0e-17 94.0 161 42.9
VMungo1309G1330 Vigna mungo HOM05D003638 ORTHO05D003202 1.0e-17 94.0 192 33.9
Eucgr.C04088 Eucalyptus grandis HOM05D003638 ORTHO05D003202 1.3e-17 93.6 157 40.1
TPR.G25664 Trifolium pratense HOM05D003638 ORTHO05D003202 2.3e-17 92.8 154 36.4
Carub.0003s2935 Capsella rubella HOM05D003638 ORTHO05D003202 3.0e-17 92.4 160 43.8
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 3.9e-17 92.0 158 38.0
AT2G15580 Arabidopsis thaliana HOM05D003638 ORTHO05D003202 5.1e-17 91.7 161 40.4
CiPaw.15G182700 Carya illinoinensis HOM05D003638 ORTHO05D003202 5.1e-17 91.7 154 44.2
Cc06_g07440 Coffea canephora HOM05D003638 ORTHO05D003202 6.7e-17 91.3 158 43.0
Oeu051707.1 Olea europaea HOM05D003638 ORTHO05D003202 1.1e-16 90.5 155 42.6
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 3.3e-16 89.0 159 34.6
THA.LOC104808922 Tarenaya hassleriana HOM05D003638 ORTHO05D003202 3.3e-16 89.0 164 39.6
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 7.4e-16 87.8 156 34.6
Peaxi162Scf00108g00110 Petunia axillaris HOM05D003638 ORTHO05D003202 7.4e-16 87.8 157 38.9
EL10Ac8g18824 Beta vulgaris HOM05D003638 ORTHO05D003202 1.6e-15 86.7 153 37.9
CARHR105850 Cardamine hirsuta HOM05D003638 ORTHO05D003202 2.8e-15 85.9 161 39.8
Gohir.D13G208400 Gossypium hirsutum HOM05D003638 ORTHO05D003202 2.8e-15 85.9 153 42.5
Gorai.013G237500 Gossypium raimondii HOM05D003638 ORTHO05D003202 2.8e-15 85.9 154 42.2
Manes.14G138400 Manihot esculenta HOM05D003638 ORTHO05D003202 2.8e-15 85.9 155 38.7
Sed0014564 Sechium edule HOM05D003638 ORTHO05D003202 3.7e-15 85.5 152 36.8
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 4.8e-15 85.1 153 41.8
Nitab4.5_0001021g0080 Nicotiana tabacum HOM05D003638 ORTHO05D003202 4.8e-15 85.1 151 37.7
PGR102G3190 Punica granatum HOM05D003638 ORTHO05D003202 6.9e-14 81.3 149 38.3
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 9.0e-14 80.9 153 38.6
Hund09319 Selenicereus undatus HOM05D003638 ORTHO05D003202 2.0e-13 79.7 150 38.7
Aa31LG8G12110 Aethionema arabicum HOM05D003638 ORTHO05D003202 2.6e-13 79.3 101 52.5
Gohir.A06G050200 Gossypium hirsutum HOM05D003638 ORTHO05D003202 2.6e-13 79.3 135 40.0
Manes.14G138300 Manihot esculenta HOM05D003638 ORTHO05D003202 3.4e-13 79.0 146 40.4
Nitab4.5_0001751g0040 Nicotiana tabacum HOM05D003638 ORTHO05D003202 4.5e-13 78.6 154 34.4
Lsat_1_v5_gn_8_63100 Lactuca sativa HOM05D003638 ORTHO05D003202 5.9e-13 78.2 155 34.8
Gohir.D08G106900 Gossypium hirsutum HOM05D003638 ORTHO05D003202 1.3e-12 77.0 153 35.3
Gorai.004G114100 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.3e-12 77.0 153 35.3
ECA236G1572 Erigeron canadensis HOM05D003638 ORTHO05D003202 2.9e-12 75.9 151 36.4
Gorai.010G056400 Gossypium raimondii HOM05D003638 ORTHO05D003202 2.9e-12 75.9 135 39.3
Oeu055917.1 Olea europaea HOM05D003638 ORTHO05D003202 8.5e-12 74.3 86 52.3
Nitab4.5_0005330g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.1e-11 73.9 154 35.7
HanXRQChr10g0315321 Helianthus annuus HOM05D003638 ORTHO05D003202 1.9e-11 73.2 156 35.9
BcaB08g34596 Brassica carinata HOM05D003638 ORTHO05D003202 5.5e-11 71.6 105 47.6
CsaV3_1G028490 Cucumis sativus L. HOM05D003638 ORTHO05D003202 9.4e-11 70.9 149 38.9
COL.COLO4_24107 Corchorus olitorius HOM05D003638 ORTHO05D003202 1.2e-10 70.5 59 62.7
Solyc07g007170.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 1.2e-10 70.5 106 46.2
ClCG06G012030 Citrullus lanatus HOM05D003638 ORTHO05D003202 2.1e-10 69.7 98 48.0
ECA234G1438 Erigeron canadensis HOM05D003638 ORTHO05D003202 2.1e-10 69.7 166 36.7
Sopen06g024020 Solanum pennellii HOM05D003638 ORTHO05D003202 2.1e-10 69.7 106 46.2
A03p45490 Brassica napus HOM05D003638 ORTHO05D003202 2.7e-10 69.3 103 48.5
BraA03t13679Z Brassica rapa HOM05D003638 ORTHO05D003202 2.7e-10 69.3 103 48.5
Sc14g0000080 Simmondsia chinensis HOM05D003638 ORTHO05D003202 2.7e-10 69.3 172 37.2
BcaC01g03063 Brassica carinata HOM05D011508 ORTHO05D017548 3.6e-10 68.9 119 42.9
Psat1g023080 Pisum sativum HOM05D003638 ORTHO05D003202 3.6e-10 68.9 124 41.1
Sopen07g003220 Solanum pennellii HOM05D003638 ORTHO05D003202 3.6e-10 68.9 106 46.2
PSO170G3167 Papaver somniferum HOM05D003638 ORTHO05D003202 6.1e-10 68.2 180 32.2
C03p56460 Brassica napus HOM05D003638 ORTHO05D003202 7.9e-10 67.8 103 47.6
BolC3t17933H Brassica oleracea HOM05D003638 ORTHO05D003202 7.9e-10 67.8 103 47.6
MSTRG.26319 Avicennia marina HOM05D003638 ORTHO05D003202 1.0e-09 67.4 163 35.0
HanXRQChr05g0137971 Helianthus annuus HOM05D003638 ORTHO05D003202 1.0e-09 67.4 158 33.5
PGSC0003DMG402030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 1.0e-09 67.4 98 46.9
A03p45520 Brassica napus HOM05D003638 ORTHO05D003202 1.8e-09 66.6 103 47.6
BraA03t13684Z Brassica rapa HOM05D003638 ORTHO05D003202 1.8e-09 66.6 103 47.6
Nn8g39712 Nelumbo nucifera HOM05D003638 ORTHO05D003202 3.0e-09 65.9 148 35.1
PSO017G4113 Papaver somniferum HOM05D003638 ORTHO05D003202 3.0e-09 65.9 175 33.7
Nitab4.5_0007535g0020 Nicotiana tabacum HOM05D003638 ORTHO05D003202 5.1e-09 65.1 99 44.4
DCAR_014923 Daucus carota HOM05D003638 ORTHO05D003202 6.7e-09 64.7 98 41.8
MELO3C010264.2 Cucumis melo HOM05D003638 ORTHO05D003202 8.8e-09 64.3 98 44.9
vmacro21883 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 2.0e-08 63.2 90 40.0
Migut.K00382 Erythranthe guttata HOM05D003638 ORTHO05D003202 2.5e-08 62.8 168 32.7
SGA_v2.0_scaffold278G46736 Striga asiatica HOM05D003638 ORTHO05D003202 3.3e-08 62.4 160 33.1
Zm00001eb374880 Zea mays HOM05D003638 ORTHO05D003202 7.4e-08 61.2 165 33.3
Nitab4.5_0001021g0070 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.2e-07 59.7 99 43.4
Sed0026668 Sechium edule HOM05D003638 ORTHO05D003202 2.2e-07 59.7 98 42.9
Lalb_Chr08g0233781 Lupinus albus HOM05D003638 ORTHO05D003202 2.8e-07 59.3 103 41.7
SEGI_39004 Sequoiadendron giganteum HOM05D003638 ORTHO05D003202 2.8e-07 59.3 108 42.6
Nn2g12242 Nelumbo nucifera HOM05D003638 ORTHO05D003202 4.8e-07 58.5 55 56.4
SEGI_35833 Sequoiadendron giganteum HOM05D003638 ORTHO05D003202 8.2e-07 57.8 104 43.3
BcaC01g03061 Brassica carinata HOM05D003638 ORTHO05D003202 1.1e-06 57.4 93 41.9
C03p56510 Brassica napus HOM05D003638 ORTHO05D003202 1.1e-06 57.4 93 41.9
BolC3t17937H Brassica oleracea HOM05D003638 ORTHO05D003202 1.1e-06 57.4 93 41.9
MSTRG.6091 Avicennia marina HOM05D003638 ORTHO05D003202 1.4e-06 57.0 156 34.6
Glyma.17G105300 Glycine max HOM05D003638 ORTHO05D003202 2.4e-06 56.2 98 37.8
arahy.Tifrunner.gnm1.ann1.S7JRIG Arachis hypogaea HOM05D003638 ORTHO05D003202 4.1e-06 55.5 107 37.4
Hund21608 Selenicereus undatus HOM05D000082 ORTHO05D003202 5.3e-06 55.1 149 34.2
Phvul.003G174500 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 9.1e-06 54.3 88 42.0


User provided reference genes

Program Settings