Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 0.0e+00 1101.7 551 100.0
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 5.3e-248 860.9 555 80.2
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 2.5e-242 842.0 556 79.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.6e-236 822.8 555 77.1
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 5.5e-221 771.2 568 71.8
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.2e-220 770.0 568 71.5
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 9.8e-210 733.8 565 71.2
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 1.4e-208 729.9 523 75.1
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.8e-208 729.6 571 69.4
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 2.0e-207 726.1 587 67.3
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.9e-206 722.2 567 70.5
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.4e-203 713.4 581 66.6
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 3.7e-201 705.3 567 68.4
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 9.2e-200 700.7 565 67.8
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.6e-199 699.9 573 67.9
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.0e-199 699.5 561 68.4
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.5e-197 693.3 566 67.1
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 2.1e-196 689.5 567 66.8
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.1e-196 689.5 581 66.4
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 2.0e-194 682.9 546 66.8
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.2e-193 679.5 556 67.3
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.8e-192 676.4 567 65.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.3e-190 670.2 562 64.6
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.3e-190 670.2 562 64.8
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.3e-190 669.5 567 65.3
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.3e-190 669.5 568 65.0
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 5.0e-190 668.3 534 68.4
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.6e-190 667.9 569 65.0
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 8.6e-190 667.5 562 64.8
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.5e-189 666.8 573 65.1
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 7.3e-189 664.5 574 65.3
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 4.7e-188 661.8 533 67.9
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.4e-184 649.4 565 65.5
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.3e-182 643.7 525 67.0
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 2.3e-182 642.9 513 66.7
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 1.5e-181 640.2 539 64.9
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.6e-180 636.7 538 64.1
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.1e-179 634.0 543 65.2
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.4e-179 633.6 565 63.7
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 2.0e-178 629.8 568 63.6
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.0e-178 629.8 527 66.2
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 5.8e-178 628.2 568 63.4
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.4e-176 623.6 569 63.1
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 3.0e-174 615.9 538 63.4
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 5.6e-173 611.7 584 59.4
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 4.0e-171 605.5 544 63.1
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 5.2e-171 605.1 650 55.5
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.5e-170 603.6 537 63.7
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 9.9e-170 600.9 533 63.0
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.9e-169 599.4 554 61.4
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.9e-166 589.0 568 60.2
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 9.6e-165 584.3 511 63.6
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 3.1e-163 579.3 572 60.0
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 6.9e-163 578.2 557 60.7
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 2.6e-162 576.2 550 60.7
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 2.9e-161 572.8 552 59.4
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 3.8e-161 572.4 606 55.9
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 3.8e-161 572.4 606 55.9
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 8.4e-161 571.2 568 60.0
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 5.1e-158 562.0 549 59.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 1.9e-157 560.1 552 58.9
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 5.6e-157 558.5 558 59.0
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 7.3e-157 558.1 516 61.6
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 3.4e-154 549.3 551 58.6
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 1.9e-152 543.5 529 59.7
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 3.0e-150 536.2 514 60.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.6e-149 531.9 512 59.2
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.6e-148 530.4 509 59.9
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 3.1e-147 526.2 504 60.1
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.3e-145 520.8 583 53.5
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 8.4e-145 518.1 540 57.2
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.8e-142 510.4 518 57.9
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 3.0e-142 509.6 558 56.1
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 9.6e-141 504.6 550 55.5
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 8.4e-137 491.5 514 57.0
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.5e-136 488.8 479 59.5
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 3.9e-134 482.6 510 54.1
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.7e-134 481.9 527 54.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 9.0e-131 471.5 586 50.0
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 7.6e-130 468.4 421 62.7
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 8.5e-129 464.9 509 56.2
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 2.1e-127 460.3 430 61.9
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 2.5e-125 453.4 481 53.8
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 2.0e-122 443.7 355 66.5
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.3e-121 441.0 545 49.4
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.3e-121 441.0 545 49.7
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 5.0e-121 439.1 513 52.6
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.8e-118 430.6 528 51.9
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 6.7e-118 428.7 470 54.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.9e-112 410.6 495 50.3
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.5e-112 410.2 500 48.6
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 3.6e-111 406.4 523 51.6
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 5.3e-99 365.9 537 46.2
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.8e-97 359.8 308 63.3
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.9e-96 357.5 551 44.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 8.8e-94 348.6 346 58.7
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 2.4e-91 340.5 564 42.2
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.3e-89 334.7 521 42.2
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.4e-85 320.1 544 41.4
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 2.7e-82 310.5 591 37.7
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 4.5e-82 309.7 285 60.7
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 1.0e-81 308.5 577 39.9
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 7.0e-75 285.8 553 39.1
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.9e-72 277.7 231 63.6
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.3e-68 265.0 219 64.8
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.3e-68 265.0 546 35.5
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 9.9e-61 238.8 600 32.7
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 1.1e-56 225.3 377 42.2
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.4e-46 191.8 655 30.2
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 7.3e-40 169.5 553 29.1
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.6e-39 168.3 387 35.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 5.4e-35 153.3 141 58.2
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.6e-34 150.2 87 80.5
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 1.3e-31 142.1 134 59.7
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 5.5e-11 73.6 66 56.1
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 3.9e-09 67.4 171 36.3
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 6.7e-09 66.6 95 38.9


User provided reference genes

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