Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p089999 Quercus lobata HOM05D001492 ORTHO05D001400 9.3e-69 263.5 137 100.0
QL02p090023 Quercus lobata HOM05D001492 ORTHO05D001400 2.2e-33 146.0 102 77.5
CiPaw.04G175700 Carya illinoinensis HOM05D001492 ORTHO05D001400 1.0e-22 110.5 109 61.5
Haze_25495 Corylus avellana HOM05D001492 ORTHO05D001400 2.3e-19 99.4 99 60.6
Cfa002925 Carpinus fangiana HOM05D001492 ORTHO05D001400 4.4e-18 95.1 99 58.6
Duzib187G0848 Durio zibethinus HOM05D001492 ORTHO05D001400 1.1e-16 90.5 102 56.9
GSVIVG01015602001 Vitis vinifera HOM05D001492 ORTHO05D001400 1.1e-16 90.5 106 54.7
CiPaw.03G249000 Carya illinoinensis HOM05D001492 ORTHO05D001400 1.2e-15 87.0 111 54.1
Gohir.A06G053500 Gossypium hirsutum HOM05D001492 ORTHO05D001400 3.5e-15 85.5 102 53.9
Thecc.09G133500 Theobroma cacao HOM05D001492 ORTHO05D001400 5.9e-15 84.7 102 53.9
Dinv41470 Davidia involucrata HOM05D001492 ORTHO05D001400 1.3e-14 83.6 103 54.4
AUR62011181 Chenopodium quinoa HOM05D001492 ORTHO05D001400 4.2e-13 78.6 102 48.0
Duzib168G0736 Durio zibethinus HOM05D001492 ORTHO05D001400 4.2e-13 78.6 102 51.0
AUR62013302 Chenopodium quinoa HOM05D001492 ORTHO05D001400 2.1e-12 76.3 102 47.1
Manes.14G116228 Manihot esculenta HOM05D001492 ORTHO05D001400 2.7e-12 75.9 101 52.5
Prupe.7G249100 Prunus persica HOM05D001492 ORTHO05D001400 3.6e-12 75.5 104 53.8
Sabra18G0106700 Salix brachista HOM05D001492 ORTHO05D001400 1.0e-11 73.9 130 44.6
Ah.09g224670 Amaranthus hybridus HOM05D001492 ORTHO05D001400 3.0e-11 72.4 102 48.0
FvH4_1g02550 Fragaria vesca HOM05D001492 ORTHO05D001400 3.0e-11 72.4 102 48.0
FAN19G0605 Fragaria x ananassa HOM05D001492 ORTHO05D001400 5.2e-11 71.6 156 37.2
FAN26G0983 Fragaria x ananassa HOM05D001492 ORTHO05D001400 5.2e-11 71.6 102 45.1
COL.COLO4_35178 Corchorus olitorius HOM05D001492 ORTHO05D001400 6.8e-11 71.2 116 45.7
Atru.chr7.1954 Acer truncatum HOM05D001492 ORTHO05D001400 8.8e-11 70.9 99 51.5
CSS0040743 Camellia sinensis var. sinensis HOM05D001492 ORTHO05D001400 8.8e-11 70.9 117 45.3
TAR625G0095 Trochodendron aralioides HOM05D001492 ORTHO05D001400 2.6e-10 69.3 102 49.0
Potri.018G125400 Populus trichocarpa HOM05D001492 ORTHO05D001400 3.4e-10 68.9 131 42.7
Potri.T125207 Populus trichocarpa HOM05D001492 ORTHO05D001400 3.4e-10 68.9 131 42.7
FAN23G1722 Fragaria x ananassa HOM05D001492 ORTHO05D001400 4.4e-10 68.6 102 45.1
RcHm_v2.0_Chr2g0087581 Rosa chinensis HOM05D001492 ORTHO05D001400 4.4e-10 68.6 101 45.5
Potri.006G065200 Populus trichocarpa HOM05D001492 ORTHO05D001400 7.5e-10 67.8 128 42.2
Actinidia07322 Actinidia chinensis HOM05D001492 ORTHO05D001400 1.7e-09 66.6 100 46.0
Hma1.2p1_0497F.1_g166440 Hydrangea macrophylla HOM05D001492 ORTHO05D001400 6.3e-09 64.7 99 49.5
Sc18g0000300 Simmondsia chinensis HOM05D001492 ORTHO05D001400 6.3e-09 64.7 107 42.1
Aqoxy7G03627 Aquilegia oxysepala HOM05D001492 ORTHO05D001400 1.4e-08 63.5 99 48.5
Hund26550 Selenicereus undatus HOM05D001492 ORTHO05D001400 1.4e-08 63.5 104 45.2
CANSAT11G1666 Cannabis sativa HOM05D001492 ORTHO05D001400 1.8e-08 63.2 87 47.1
Actinidia21946 Actinidia chinensis HOM05D001492 ORTHO05D001400 2.4e-08 62.8 101 47.5
TAR383G0276 Trochodendron aralioides HOM05D000291 ORTHO05D001400 2.4e-08 62.8 102 47.1
Ciclev10008615m.g Citrus clementina HOM05D001492 ORTHO05D001400 3.1e-08 62.4 103 43.7
MD02G1023000 Malus domestica HOM05D001492 ORTHO05D001400 2.7e-07 59.3 68 51.5
Sabra06G0047600 Salix brachista HOM05D001492 ORTHO05D001400 2.7e-07 59.3 128 39.1
TWI32G1254 Tripterygium wilfordii HOM05D001492 ORTHO05D001400 2.7e-07 59.3 102 44.1
PSO170G4027 Papaver somniferum HOM05D001492 ORTHO05D001400 3.5e-07 58.9 175 32.0
PSO017G5785 Papaver somniferum HOM05D001492 ORTHO05D001400 5.9e-07 58.2 175 31.4
Peaxi162Scf00088g00125 Petunia axillaris HOM05D001492 ORTHO05D001400 1.0e-06 57.4 101 40.6
MBI14_g09865_MAGBIO Magnolia biondii HOM05D001492 ORTHO05D001400 2.3e-06 56.2 111 40.5
Nn2g12127 Nelumbo nucifera HOM05D001492 ORTHO05D001400 2.3e-06 56.2 105 41.9
TAR636G0826 Trochodendron aralioides HOM05D001492 ORTHO05D001400 5.0e-06 55.1 104 42.3
FAN28G1598 Fragaria x ananassa HOM05D001492 ORTHO05D001400 6.6e-06 54.7 143 33.6
MD15G1165700 Malus domestica HOM05D001492 ORTHO05D001400 6.6e-06 54.7 98 43.9
SalBow6G0529 Salvia bowleyana HOM05D001492 ORTHO05D001400 8.6e-06 54.3 86 44.2


User provided reference genes

Program Settings