Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 2.2e-35 151.8 76 100.0
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 1.0e-24 116.3 79 77.2
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 1.3e-24 115.9 80 77.5
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 3.9e-24 114.4 80 76.2
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 9.5e-23 109.8 79 73.4
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 2.3e-21 105.1 81 77.8
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 6.8e-21 103.6 80 70.0
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 8.9e-21 103.2 79 72.2
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 2.0e-20 102.1 77 75.3
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 2.6e-20 101.7 82 70.7
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 7.5e-20 100.1 83 63.9
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 1.3e-19 99.4 84 64.3
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 2.2e-19 98.6 80 71.2
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 3.7e-19 97.8 76 69.7
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 3.7e-19 97.8 82 70.7
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 1.1e-18 96.3 76 68.4
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 2.4e-18 95.1 76 68.4
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 2.4e-18 95.1 82 67.1
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 4.1e-18 94.4 77 66.2
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 9.2e-18 93.2 83 65.1
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 9.2e-18 93.2 83 65.1
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 9.2e-18 93.2 83 65.1
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.6e-17 92.4 75 62.7
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 1.6e-17 92.4 75 62.7
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 1.7e-16 89.0 90 61.1
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 2.3e-16 88.6 89 62.9
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 3.9e-16 87.8 85 68.2
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 2.5e-15 85.1 82 59.8
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 1.2e-14 82.8 76 59.2
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 3.6e-14 81.3 83 55.4
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 8.1e-14 80.1 79 54.4
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 1.8e-13 79.0 81 60.5
Glyma.09G190000 Glycine max HOM05D008067 ORTHO05D010226 4.0e-13 77.8 80 60.0
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 5.2e-13 77.4 87 63.2
TPR.G21702 Trifolium pratense HOM05D008067 ORTHO05D010226 6.8e-13 77.0 78 64.1
TPR.G23486 Trifolium pratense HOM05D008067 ORTHO05D010226 6.8e-13 77.0 78 64.1
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 1.2e-12 76.3 72 62.5
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 1.5e-12 75.9 76 52.6
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 2.6e-12 75.1 78 62.8
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 2.6e-12 75.1 79 62.0
Lj2g0006280 Lotus japonicus HOM05D008067 ORTHO05D010226 2.6e-12 75.1 76 57.9
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 3.4e-12 74.7 62 62.9
Glyma.08G039000 Glycine max HOM05D008067 ORTHO05D010226 4.4e-12 74.3 57 61.4
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 5.8e-12 73.9 83 61.4
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 5.8e-12 73.9 101 47.5
RhsimUnG0085400 Rhododendron simsii HOM05D008067 ORTHO05D010226 7.6e-12 73.6 78 59.0
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 7.6e-12 73.6 80 50.0
Ah.09g227900 Amaranthus hybridus HOM05D008067 ORTHO05D010226 9.9e-12 73.2 53 71.7
Medtr6g086485 Medicago truncatula HOM05D008067 ORTHO05D010226 9.9e-12 73.2 71 56.3
Lalb_Chr05g0222841 Lupinus albus HOM05D008067 ORTHO05D010226 1.3e-11 72.8 72 56.9
EL10Ac8g18505 Beta vulgaris HOM05D008067 ORTHO05D010226 1.7e-11 72.4 85 54.1
Glyma.07G086900 Glycine max HOM05D008067 ORTHO05D010226 2.2e-11 72.0 78 57.7
Psat7g013560 Pisum sativum HOM05D008067 ORTHO05D010226 2.9e-11 71.6 67 65.7
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 2.9e-11 71.6 70 60.0
Peaxi162Scf00546g00115 Petunia axillaris HOM05D008067 ORTHO05D010226 6.4e-11 70.5 63 63.5
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 6.4e-11 70.5 88 45.5
Lalb_Chr22g0352831 Lupinus albus HOM05D008067 ORTHO05D010226 8.4e-11 70.1 78 59.0
DCAR_028716 Daucus carota HOM05D008067 ORTHO05D010226 1.4e-10 69.3 63 60.3
Psat1g041240 Pisum sativum HOM05D008067 ORTHO05D010226 1.4e-10 69.3 79 53.2
Glyma.05G231500 Glycine max HOM05D008067 ORTHO05D010226 1.9e-10 68.9 55 65.5
Lj4g0026171 Lotus japonicus HOM05D008067 ORTHO05D010226 1.9e-10 68.9 53 66.0
Phvul.004G162800 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 1.9e-10 68.9 71 56.3
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 4.1e-10 67.8 69 52.2
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 1.2e-09 66.2 74 50.0
Lj2g0022306 Lotus japonicus HOM05D008067 ORTHO05D010226 2.1e-09 65.5 70 57.1
Lj2g0013738 Lotus japonicus HOM05D008067 ORTHO05D010226 2.7e-09 65.1 59 61.0
Lj2g0025160 Lotus japonicus HOM05D008067 ORTHO05D010226 3.5e-09 64.7 76 53.9
TAR636G2707 Trochodendron aralioides HOM05D003111 ORTHO05D003502 3.5e-09 64.7 52 63.5
Sed0018150 Sechium edule HOM05D008067 ORTHO05D010226 5.1e-08 60.8 76 48.7
Sed0018286 Sechium edule HOM05D008067 ORTHO05D010226 2.5e-07 58.5 81 45.7
Phvul.002G313700 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 5.6e-07 57.4 37 73.0


User provided reference genes

Program Settings