Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 4.6e-244 847.4 416 100.0
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 7.9e-196 687.2 416 83.9
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 7.4e-194 680.6 416 83.4
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.7e-177 626.3 416 76.9
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 4.4e-170 601.7 416 75.0
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 7.5e-170 600.9 416 74.5
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 3.7e-169 598.6 416 71.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 1.6e-167 593.2 409 73.1
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.7e-166 589.7 418 71.3
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 2.9e-166 589.0 416 72.8
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 5.0e-166 588.2 411 73.7
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 5.0e-166 588.2 411 73.7
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 8.5e-166 587.4 408 74.3
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.9e-165 586.3 398 74.4
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.7e-164 582.4 417 72.7
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 6.1e-164 581.3 416 72.1
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 8.0e-164 580.9 421 71.3
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 1.0e-163 580.5 443 67.7
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.0e-163 578.9 417 72.2
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.2e-162 577.0 416 71.9
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 2.0e-162 576.2 409 72.4
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 9.8e-162 573.9 416 70.7
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.7e-161 573.2 405 73.1
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 4.8e-161 571.6 417 71.7
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.4e-160 568.2 382 74.1
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 9.1e-160 567.4 416 69.0
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 3.5e-159 565.5 416 68.0
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 2.9e-158 562.4 342 78.7
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.5e-157 560.1 416 70.9
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.6e-156 555.4 410 69.8
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 5.2e-155 551.6 411 69.6
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.5e-154 550.1 385 71.2
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 2.6e-154 549.3 418 69.1
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 3.4e-154 548.9 420 67.9
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.8e-153 545.8 419 68.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 4.9e-153 545.0 382 71.7
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 8.3e-153 544.3 417 67.4
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.4e-152 543.5 347 76.7
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.8e-152 543.1 374 71.9
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 2.4e-152 542.7 406 67.7
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 3.1e-152 542.3 311 84.9
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 4.1e-152 542.0 419 68.7
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 4.1e-152 542.0 383 70.2
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 7.0e-152 541.2 367 72.5
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.2e-151 540.4 380 69.5
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 2.7e-151 539.3 416 67.8
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.5e-151 538.9 416 67.8
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 4.5e-151 538.5 382 70.9
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 4.5e-151 538.5 417 67.4
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 1.7e-150 536.6 396 68.4
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 2.9e-150 535.8 361 73.4
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 3.8e-150 535.4 426 67.1
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 9.5e-149 530.8 418 66.7
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 2.1e-148 529.6 368 72.6
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 2.8e-148 529.3 373 71.0
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 4.7e-148 528.5 382 69.4
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.8e-147 526.6 380 68.7
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.8e-147 526.6 396 69.4
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 5.2e-147 525.0 416 65.9
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 6.8e-147 524.6 368 71.2
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 8.9e-147 524.2 417 65.7
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 3.4e-146 522.3 425 64.9
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 4.4e-146 521.9 343 73.8
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.4e-146 521.9 388 66.8
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 4.4e-146 521.9 345 74.2
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 9.8e-146 520.8 383 69.7
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 1.7e-145 520.0 418 65.3
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 4.1e-144 515.4 418 65.1
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 9.2e-144 514.2 345 71.6
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 9.2e-144 514.2 382 68.3
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 3.5e-143 512.3 417 64.5
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 3.5e-143 512.3 417 64.5
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 5.9e-143 511.5 322 77.6
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.0e-142 510.8 385 69.1
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.3e-142 510.4 415 64.3
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.3e-142 510.4 344 70.3
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 3.0e-142 509.2 356 71.1
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 3.0e-142 509.2 408 63.5
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 5.0e-142 508.4 398 66.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 8.6e-142 507.7 319 77.1
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 4.3e-141 505.4 410 65.1
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 4.3e-141 505.4 410 65.1
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 9.5e-141 504.2 386 65.3
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.6e-140 503.4 419 64.0
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 2.3e-139 499.6 403 65.3
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 8.9e-139 497.7 319 75.5
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 7.8e-135 484.6 344 70.1
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 6.6e-134 481.5 360 67.5
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 4.3e-133 478.8 345 66.1
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 1.6e-132 476.9 428 60.7
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 2.6e-130 469.5 410 61.7
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 3.3e-125 452.6 368 64.9
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 3.6e-124 449.1 349 64.2
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 2.3e-123 446.4 329 71.7
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 2.3e-123 446.4 297 73.7
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 2.3e-123 446.4 392 59.4
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.9e-117 426.8 360 65.8
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 4.3e-117 425.6 249 81.1
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.7e-113 413.7 249 80.3
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 4.0e-107 392.5 257 74.3
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 5.8e-106 388.7 345 55.4
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 2.2e-105 386.7 208 88.0
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.5e-101 373.2 340 62.1
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.1e-100 370.2 321 62.9
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 4.0e-99 365.9 418 52.2
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 9.3e-88 328.2 375 45.6
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 1.8e-86 323.9 362 45.3
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 2.4e-67 260.4 346 37.9
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 4.5e-66 256.1 184 64.7
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.4e-43 179.5 386 35.8
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 2.0e-42 177.6 124 68.5
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 7.2e-40 169.1 160 56.2
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 1.8e-38 164.5 177 46.9
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.2e-34 151.8 100 74.0
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.0e-34 151.0 91 75.8
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.3e-33 147.5 97 72.2
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 9.8e-21 105.5 89 58.4
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 1.5e-16 91.7 140 47.9
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.1e-15 87.8 51 72.5
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 2.8e-15 87.4 93 51.6


User provided reference genes

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