Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 9.5e-281 969.5 494 100.0
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 4.4e-20 103.6 372 29.6
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-19 102.1 368 26.4
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-18 98.2 361 25.8
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-18 96.3 363 25.9
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 2.1e-17 94.7 339 28.9
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-17 93.6 342 27.5
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-16 92.4 370 26.8
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-16 92.4 370 26.8
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-16 90.9 342 26.3
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 6.6e-16 89.7 342 26.0
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-15 87.4 353 24.4
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.6e-14 84.0 191 34.0
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-14 83.2 344 27.6
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.4e-13 82.0 367 25.3
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.4e-13 81.3 360 25.3
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-13 79.7 292 26.7
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-13 79.7 292 26.7
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-12 79.0 357 24.6
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-12 78.2 349 24.4
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-12 77.8 291 26.5
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 4.4e-12 77.0 302 26.5
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 7.6e-12 76.3 213 29.6
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.9e-12 75.9 361 25.5
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.9e-12 75.9 283 27.6
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-11 75.5 352 26.1
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-11 74.7 192 30.2
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-11 74.3 283 26.1
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-11 73.9 199 30.2
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-11 73.6 353 23.2
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-11 73.6 354 26.0
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-10 72.4 284 26.8
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-10 72.4 360 25.8
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 1.4e-10 72.0 199 29.6
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.2e-10 70.5 187 31.0
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 7.1e-10 69.7 351 25.9
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 7.1e-10 69.7 220 28.2
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 7.1e-10 69.7 355 25.9
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.3e-10 69.3 218 28.4
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-09 68.2 248 27.8
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-09 68.2 248 27.8
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.1e-09 68.2 299 26.8
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 2.7e-09 67.8 293 26.6
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.7e-09 67.8 293 26.6
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 3.5e-09 67.4 292 26.7
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 6.0e-09 66.6 126 36.5
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.0e-08 64.3 104 40.4
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 3.9e-08 63.9 281 27.8
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 5.1e-08 63.5 290 26.6
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 6.6e-08 63.2 297 24.6
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-08 63.2 273 25.6
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 1.5e-07 62.0 326 23.9
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-07 62.0 484 22.1
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-07 61.2 196 27.0
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 3.3e-07 60.8 317 25.9
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.3e-07 60.8 293 26.3
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.3e-07 60.8 297 23.9
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.3e-07 60.8 297 23.9
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 7.3e-07 59.7 320 25.6
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 9.6e-07 59.3 182 33.5
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-06 58.9 176 28.4
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.6e-06 58.5 196 26.5
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 2.8e-06 57.8 115 35.7
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.8e-06 57.8 115 35.7


User provided reference genes

Program Settings