Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 1.2e-294 1015.8 510 100.0
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 7.1e-215 750.7 550 71.6
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 7.2e-207 724.2 483 75.4
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 2.3e-205 719.2 504 72.2
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 6.3e-203 711.1 484 74.2
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 1.0e-197 693.7 497 68.4
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.5e-196 689.9 487 70.2
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 3.7e-195 685.3 484 71.3
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 4.1e-194 681.8 484 71.7
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 5.9e-193 677.9 480 69.4
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 2.5e-191 672.5 478 68.2
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 3.0e-189 665.6 504 67.3
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 5.2e-189 664.8 482 67.8
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 9.1e-186 654.1 502 64.7
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 9.1e-186 654.1 483 68.5
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 1.5e-183 646.7 483 67.5
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 4.2e-183 645.2 484 64.7
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 2.3e-181 639.4 482 66.8
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.2e-177 627.1 499 64.3
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.6e-177 626.7 486 66.3
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.5e-175 620.2 482 65.8
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.6e-174 615.5 486 65.8
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 2.6e-172 609.4 561 57.6
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.8e-171 605.9 463 66.3
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 2.8e-171 605.9 490 64.1
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 3.7e-171 605.5 480 62.3
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 8.3e-171 604.4 486 63.6
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 7.0e-170 601.3 482 64.1
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 8.6e-168 594.3 484 63.2
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 2.1e-166 589.7 482 61.8
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.0e-165 587.4 587 54.9
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.4e-165 587.0 487 62.4
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 2.3e-165 586.3 482 59.8
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 8.9e-165 584.3 487 62.2
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.2e-164 583.9 487 61.8
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 2.6e-164 582.8 487 61.6
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 4.4e-164 582.0 459 65.1
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 2.2e-163 579.7 484 59.7
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 4.9e-163 578.6 486 62.3
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 8.3e-163 577.8 481 62.0
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 9.2e-162 574.3 472 61.0
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 5.9e-161 571.6 489 60.1
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 1.5e-159 567.0 501 57.9
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.1e-158 563.1 518 56.9
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.5e-156 557.0 495 58.0
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 2.6e-156 556.2 501 57.9
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 1.1e-154 550.8 491 60.1
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 1.2e-153 547.4 479 60.5
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 7.8e-153 544.7 483 59.8
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.7e-152 543.5 483 59.0
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 5.6e-151 538.5 487 57.9
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 9.5e-151 537.7 483 59.0
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 3.1e-149 532.7 479 57.4
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 4.0e-149 532.3 595 51.3
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.5e-148 530.4 484 57.4
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 5.8e-148 528.5 491 56.6
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 7.5e-148 528.1 502 57.6
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.9e-146 523.5 477 57.9
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 7.0e-146 521.5 349 73.9
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 3.5e-145 519.2 510 53.9
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.9e-143 513.5 493 56.6
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 5.6e-143 511.9 482 54.4
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 2.8e-142 509.6 482 54.1
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 1.4e-141 507.3 464 54.5
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 1.2e-140 504.2 483 55.9
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.2e-140 504.2 472 54.9
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 2.2e-139 500.0 374 68.2
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.9e-138 496.9 394 63.7
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 2.4e-138 496.5 489 55.2
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 5.1e-136 488.8 479 53.0
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 5.2e-133 478.8 474 55.1
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 7.6e-132 474.9 342 70.8
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.7e-128 463.8 461 54.9
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 2.3e-128 463.4 405 62.0
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 5.1e-128 462.2 461 54.7
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 4.3e-127 459.1 489 50.9
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.5e-124 450.7 476 52.9
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 9.9e-124 448.0 426 53.8
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 8.1e-118 428.3 397 55.2
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 4.6e-113 412.5 486 46.5
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 5.1e-112 409.1 492 47.6
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 9.6e-111 404.8 580 42.8
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 7.6e-108 395.2 513 47.2
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 1.5e-103 380.9 352 58.8
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 5.5e-98 362.5 500 42.2
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 2.1e-97 360.5 315 59.7
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 9.4e-90 335.1 287 58.9
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 2.9e-83 313.5 483 41.8
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 7.7e-76 288.9 216 65.3
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 9.4e-74 282.0 417 39.6
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.3e-62 245.0 223 59.2
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.0e-51 208.8 205 54.6
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 2.8e-41 174.1 168 55.4
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 4.1e-29 133.7 177 39.5
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 2.3e-27 127.9 216 42.1
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.3e-22 112.1 72 76.4
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 168 39.9
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 168 39.9
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 2.7e-20 104.4 161 41.6
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 4.6e-20 103.6 109 50.5
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 5.1e-19 100.1 137 44.5
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.1e-18 99.0 113 46.9
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 1.2e-17 95.5 124 46.8
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 2.8e-17 94.4 70 65.7
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 2.8e-17 94.4 179 35.2
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 7.6e-15 86.3 60 66.7
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 7.6e-15 86.3 130 36.2
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 4.6e-12 77.0 69 53.6
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 4.3e-10 70.5 293 27.6
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 4.3e-10 70.5 51 58.8
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 6.9e-08 63.2 39 71.8
MSTRG.3354 Avicennia marina HOM05D005508 ORTHO05D006882 8.4e-06 56.2 273 23.1
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 8.4e-06 56.2 289 26.0


User provided reference genes

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