Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 9.8e-101 370.2 191 100.0
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 1.9e-51 206.5 196 61.2
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 2.5e-48 196.1 202 61.9
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 8.8e-25 117.9 188 41.5
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 9.1e-22 107.8 185 43.2
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-21 106.7 178 44.4
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 5.9e-21 105.1 190 41.6
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 1.6e-18 97.1 190 36.3
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-17 94.4 195 35.9
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 4.8e-15 85.5 187 34.8
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.4e-14 84.0 178 38.8
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.4e-14 84.0 129 43.4
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 1.8e-14 83.6 130 42.3
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 7.0e-14 81.6 130 43.1
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 7.0e-14 81.6 130 43.1
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 1.6e-13 80.5 132 41.7
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 4.5e-13 79.0 178 37.6
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.5e-13 79.0 132 38.6
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 3.8e-12 75.9 145 37.9
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.0e-12 75.5 121 38.0
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 8.5e-12 74.7 125 40.8
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 1.5e-11 73.9 100 46.0
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.2e-11 72.8 103 40.8
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 5.5e-11 72.0 127 37.8
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.5e-11 72.0 127 37.8
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 9.4e-11 71.2 89 49.4
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-10 70.9 113 35.4
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 1.6e-10 70.5 128 38.3
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.6e-10 70.5 128 38.3
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 2.1e-10 70.1 125 36.8
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.7e-10 68.9 117 37.6
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 8.0e-10 68.2 104 37.5
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 1.4e-09 67.4 132 35.6
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 1.4e-09 67.4 179 33.0
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 1.8e-09 67.0 138 34.1
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.8e-09 67.0 128 36.7
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 2.3e-09 66.6 151 36.4
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 3.0e-09 66.2 102 39.2
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 3.0e-09 66.2 128 36.7
Gohir.A09G091466 Gossypium hirsutum HOM05D010298 ORTHO05D012539 3.0e-09 66.2 184 29.3
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 6.8e-09 65.1 139 34.5
Gohir.D09G091480 Gossypium hirsutum HOM05D010298 ORTHO05D012539 6.8e-09 65.1 184 30.4
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 6.8e-09 65.1 155 33.5
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 6.8e-09 65.1 132 33.3
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.5e-08 63.9 103 35.9
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 1.5e-08 63.9 111 34.2
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 1.5e-08 63.9 118 33.9
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 2.0e-08 63.5 146 33.6
Gorai.006G107900 Gossypium raimondii HOM05D010298 ORTHO05D012539 2.0e-08 63.5 168 30.4
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 2.6e-08 63.2 109 35.8
TAR636G1074 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.6e-08 63.2 115 29.6
Haze_24937 Corylus avellana HOM05D007277 ORTHO05D006336 3.4e-08 62.8 87 43.7
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 4.4e-08 62.4 110 40.0
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 7.5e-08 61.6 104 36.5
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 7.5e-08 61.6 133 32.3
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 1.3e-07 60.8 107 36.4
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 1.3e-07 60.8 137 37.2
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 1.7e-07 60.5 105 37.1
QL10p047937 Quercus lobata HOM05D007277 ORTHO05D006336 2.8e-07 59.7 124 30.6
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 3.7e-07 59.3 127 34.6
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 4.8e-07 58.9 104 38.5
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 6.3e-07 58.5 125 36.8
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.1e-06 57.8 147 29.9
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 1.1e-06 57.8 117 29.9
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 1.4e-06 57.4 144 30.6
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 1.4e-06 57.4 158 30.4
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 1.8e-06 57.0 114 34.2
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 2.4e-06 56.6 152 26.3
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 2.4e-06 56.6 132 33.3
QL07p042964 Quercus lobata HOM05D007277 ORTHO05D006336 4.1e-06 55.8 148 31.8
QL10p048111 Quercus lobata HOM05D010635 ORTHO05D006336 7.0e-06 55.1 104 30.8
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 7.0e-06 55.1 126 31.7
MD12G1151700 Malus domestica HOM05D007277 ORTHO05D006336 9.1e-06 54.7 98 36.7


User provided reference genes

Program Settings