Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-97 360.1 190 100.0
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-47 193.7 202 61.9
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 6.5e-36 154.8 198 55.1
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 4.3e-16 89.0 160 40.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 4.8e-15 85.5 142 43.0
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 1.4e-14 84.0 181 38.1
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 6.9e-14 81.6 125 45.6
Haze_24863 Corylus avellana HOM05D000010 ORTHO05D006336 9.1e-14 81.3 127 44.1
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 3.4e-13 79.3 184 36.4
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 1.7e-12 77.0 126 41.3
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 2.2e-12 76.6 108 40.7
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.8e-12 75.9 114 40.4
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 6.5e-12 75.1 126 41.3
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 6.5e-12 75.1 183 32.2
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 3.2e-11 72.8 126 39.7
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 5.5e-11 72.0 166 36.7
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 5.5e-11 72.0 121 38.0
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 7.2e-11 71.6 142 36.6
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 9.4e-11 71.2 100 45.0
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 2.1e-10 70.1 126 39.7
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 2.1e-10 70.1 126 39.7
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 6.1e-10 68.6 166 36.1
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 1.8e-09 67.0 136 35.3
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.3e-09 66.6 113 34.5
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.0e-09 66.2 99 40.4
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 5.1e-09 65.5 136 36.0
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.1e-09 65.5 136 36.0
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 6.7e-09 65.1 89 46.1
Cfa002610 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.0e-08 63.5 122 35.2
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 3.3e-08 62.8 119 37.0
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 3.3e-08 62.8 105 39.0
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.3e-08 62.8 142 32.4
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 4.4e-08 62.4 142 32.4
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.7e-08 62.0 142 33.1
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.7e-08 62.0 136 34.6
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 9.7e-08 61.2 111 40.5
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 2.2e-07 60.1 136 33.8
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.2e-07 60.1 106 35.8
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 2.8e-07 59.7 113 37.2
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.8e-07 59.7 139 35.3
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 2.8e-07 59.7 116 34.5
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 2.8e-07 59.7 146 30.1
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 3.7e-07 59.3 138 32.6
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 4.8e-07 58.9 124 33.1
Haze_24937 Corylus avellana HOM05D007277 ORTHO05D006336 6.3e-07 58.5 85 43.5
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 6.3e-07 58.5 129 35.7
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 1.1e-06 57.8 121 33.9
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 1.4e-06 57.4 112 32.1
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.4e-06 57.4 152 33.6
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 2.4e-06 56.6 133 30.8
MD11G1013900 Malus domestica HOM05D007277 ORTHO05D006336 2.4e-06 56.6 137 32.8
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 2.4e-06 56.6 122 33.6
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 2.4e-06 56.6 144 33.3
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 2.4e-06 56.6 134 32.8
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 3.1e-06 56.2 103 32.0
QL10p052020 Quercus lobata HOM05D007277 ORTHO05D006336 3.1e-06 56.2 106 32.1
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 4.1e-06 55.8 133 30.8
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 4.1e-06 55.8 128 33.6
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 5.3e-06 55.5 133 35.3
Sabra07G0120000 Salix brachista HOM05D010635 ORTHO05D006336 7.0e-06 55.1 118 32.2
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 9.1e-06 54.7 137 30.7
Prupe.6G011700 Prunus persica HOM05D007277 ORTHO05D006336 9.1e-06 54.7 111 33.3
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 9.1e-06 54.7 125 35.2


User provided reference genes

Program Settings