Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 2.0e-109 399.1 194 100.0
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 4.9e-108 394.4 194 98.5
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 8.7e-97 357.1 194 87.1
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 8.5e-92 340.5 194 84.0
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 3.2e-91 338.6 225 75.1
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 2.7e-90 335.5 191 82.7
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 8.8e-89 330.5 194 80.4
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 2.0e-88 329.3 194 78.9
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 5.7e-88 327.8 192 80.7
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 6.3e-87 324.3 190 82.1
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 8.2e-87 323.9 193 79.8
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 8.2e-87 323.9 191 78.5
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 2.4e-86 322.4 189 78.3
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 3.1e-86 322.0 194 79.9
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 3.1e-86 322.0 194 79.9
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 1.5e-85 319.7 190 77.4
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 2.6e-85 318.9 190 78.4
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 6.5e-84 314.3 184 81.0
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 4.2e-83 311.6 184 78.3
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 9.4e-83 310.5 184 80.4
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 1.2e-82 310.1 191 77.0
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.2e-82 310.1 191 75.9
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.1e-82 309.3 184 77.7
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 2.7e-82 308.9 185 78.4
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 3.6e-82 308.5 191 75.4
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 1.0e-81 307.0 184 78.8
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.0e-81 307.0 189 73.5
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 2.3e-81 305.8 190 76.3
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 2.3e-81 305.8 191 74.9
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 2.3e-81 305.8 184 78.3
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 3.0e-81 305.4 186 78.0
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 3.9e-81 305.1 194 75.3
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 3.9e-81 305.1 187 73.8
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 5.1e-81 304.7 187 73.3
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.1e-80 303.5 186 77.4
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 2.0e-80 302.8 187 73.8
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 2.6e-80 302.4 184 77.2
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 3.3e-80 302.0 186 76.3
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 3.3e-80 302.0 188 72.9
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 4.4e-80 301.6 191 74.9
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 5.7e-80 301.2 194 74.2
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 9.7e-80 300.4 187 73.8
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 1.3e-79 300.1 187 72.7
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 1.7e-79 299.7 184 77.2
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 1.7e-79 299.7 191 74.9
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 1.7e-79 299.7 186 76.3
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 2.2e-79 299.3 186 76.9
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 2.8e-79 298.9 188 73.9
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 2.8e-79 298.9 191 73.3
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 4.8e-79 298.1 185 75.7
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 6.3e-79 297.7 186 75.3
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 8.2e-79 297.4 187 76.5
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 1.4e-78 296.6 184 75.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.8e-78 296.2 192 71.4
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 3.1e-78 295.4 184 73.4
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.1e-78 295.0 211 70.1
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 5.3e-78 294.7 176 80.1
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.6e-77 293.1 190 74.2
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 2.0e-77 292.7 191 72.3
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 3.5e-77 292.0 203 68.0
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 1.3e-76 290.0 184 75.5
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.3e-76 290.0 191 71.7
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 3.8e-76 288.5 184 72.3
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 8.5e-76 287.3 184 71.7
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 3.2e-75 285.4 187 72.2
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 4.2e-75 285.0 184 73.4
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 9.4e-75 283.9 184 71.2
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 8.0e-74 280.8 189 69.3
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.8e-73 279.6 167 79.6
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 2.0e-72 276.2 235 59.1
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.6e-72 275.8 223 62.8
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 4.8e-71 271.6 167 76.6
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 6.3e-71 271.2 191 70.7
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.4e-70 270.0 188 67.0
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 5.3e-70 268.1 191 67.5
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 9.1e-70 267.3 185 68.1
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 1.2e-69 266.9 197 67.5
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 2.0e-69 266.2 174 73.6
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 2.0e-69 266.2 187 68.4
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 7.7e-69 264.2 194 65.5
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.7e-68 263.1 191 68.1
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 8.5e-68 260.8 155 79.4
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 4.2e-67 258.5 189 68.3
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 5.2e-65 251.5 187 64.7
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 6.3e-63 244.6 203 59.1
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 4.1e-62 241.9 191 62.3
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 5.4e-62 241.5 182 61.5
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 7.0e-62 241.1 189 61.9
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.6e-61 240.0 223 57.0
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 5.5e-59 231.5 174 65.5
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 9.4e-59 230.7 136 74.3
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 1.2e-58 230.3 184 57.1
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 6.1e-58 228.0 184 57.6
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 4.9e-55 218.4 143 69.2
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 4.9e-55 218.4 143 68.5
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 5.4e-54 214.9 135 74.8
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 3.5e-53 212.2 213 49.3
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 1.0e-52 210.7 192 52.6
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 9.8e-48 194.1 135 69.6
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 2.4e-46 189.5 157 63.1
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 4.6e-45 185.3 117 73.5
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.0e-32 143.3 84 77.4
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 1.1e-30 137.5 111 61.3
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 6.2e-26 121.7 103 59.2
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.4e-25 120.6 86 67.4
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 3.1e-25 119.4 123 49.6
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 1.9e-22 110.2 96 57.3
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 5.6e-19 98.6 110 50.0
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.1e-17 94.4 77 57.1
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.0e-17 92.4 52 82.7
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 2.9e-15 86.3 117 40.2
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.4e-14 84.0 45 84.4
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 2.4e-14 83.2 194 33.5
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 2.4e-14 83.2 62 58.1
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 6.0e-13 78.6 56 58.9
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 8.1e-10 68.2 49 69.4
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 1.2e-08 64.3 34 85.3
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 7.6e-08 61.6 34 82.4
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.8e-07 59.3 35 68.6
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 4.9e-07 58.9 63 49.2


User provided reference genes

Program Settings