Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.3e-177 626.3 316 100.0
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 7.7e-135 484.2 320 78.4
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 8.0e-124 447.6 295 80.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.4e-123 446.8 312 74.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.0e-123 445.7 317 74.1
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 4.0e-123 445.3 319 74.6
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.7e-121 439.9 317 72.9
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 2.2e-121 439.5 316 71.8
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.4e-120 436.8 318 70.4
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 7.0e-120 434.5 317 71.6
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 9.2e-120 434.1 315 71.4
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 5.9e-119 431.4 315 71.4
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 6.6e-118 427.9 318 71.4
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.5e-117 426.8 319 71.8
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 2.5e-117 426.0 317 71.6
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 7.3e-117 424.5 320 69.4
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 6.1e-116 421.4 312 73.1
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 8.0e-116 421.0 315 69.8
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.0e-116 421.0 332 67.5
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 8.0e-116 421.0 310 70.6
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 1.0e-115 420.6 274 76.3
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.0e-115 420.6 319 70.8
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-115 420.2 321 69.5
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 4.0e-115 418.7 319 69.9
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 5.2e-115 418.3 319 70.8
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 1.2e-114 417.2 265 77.0
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 2.6e-114 416.0 319 70.5
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 3.4e-114 415.6 313 69.0
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 7.5e-114 414.5 312 67.3
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 9.8e-114 414.1 314 71.7
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.3e-113 413.7 313 68.4
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 2.2e-113 412.9 313 71.2
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 2.9e-113 412.5 311 71.7
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 4.9e-113 411.8 310 71.0
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 9.2e-112 407.5 302 71.5
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 9.2e-112 407.5 309 68.6
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 9.2e-112 407.5 319 68.3
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.6e-111 406.8 314 68.5
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.7e-110 403.3 318 67.9
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.7e-110 403.3 318 67.9
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 6.6e-110 401.4 316 66.8
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.1e-109 400.6 310 65.8
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.2e-108 397.1 314 67.5
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.6e-108 396.7 317 67.2
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 4.7e-108 395.2 317 67.2
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 6.2e-108 394.8 316 67.1
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 8.0e-108 394.4 293 67.2
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.0e-108 394.4 316 67.7
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 8.0e-108 394.4 315 69.2
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.8e-107 393.3 317 66.6
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.8e-107 393.3 257 75.9
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 6.8e-107 391.3 297 71.4
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 2.6e-106 389.4 355 62.3
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.4e-106 389.0 319 65.8
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 3.4e-106 389.0 313 65.5
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 7.5e-106 387.9 316 68.0
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 1.3e-105 387.1 328 66.8
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 2.2e-105 386.3 327 66.7
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 2.9e-105 386.0 316 67.1
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 1.9e-104 383.3 318 65.4
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 2.4e-104 382.9 304 65.8
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 7.1e-104 381.3 312 66.3
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 1.2e-103 380.6 312 66.3
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 3.5e-103 379.0 286 68.9
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 3.9e-102 375.6 289 68.2
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 2.5e-101 372.9 321 61.4
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 3.3e-101 372.5 314 64.0
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 9.5e-101 370.9 272 67.6
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.8e-100 369.4 318 63.5
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.8e-100 369.4 316 64.9
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 8.1e-100 367.9 324 63.3
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 8.1e-100 367.9 324 63.3
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 1.1e-99 367.5 317 64.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 1.1e-99 367.5 224 78.6
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.4e-99 367.1 297 66.0
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 5.2e-99 365.2 278 68.3
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 8.9e-99 364.4 321 63.9
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 5.8e-98 361.7 348 59.2
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 5.8e-98 361.7 327 61.5
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 5.8e-98 361.7 327 61.5
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 9.9e-98 360.9 325 62.5
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 1.7e-97 360.1 316 60.4
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.7e-97 360.1 254 72.8
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.2e-97 359.8 302 66.2
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.9e-97 359.4 260 70.0
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.1e-96 357.5 322 60.2
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.6e-95 353.6 303 61.7
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 2.1e-92 343.2 272 69.1
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 2.1e-92 343.2 316 59.2
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 2.4e-91 339.7 321 57.3
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 8.9e-91 337.8 197 82.7
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.4e-90 335.9 212 77.4
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.2e-87 327.4 210 76.7
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 4.4e-82 308.9 176 83.5
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 3.8e-81 305.8 176 84.1
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 4.2e-80 302.4 278 62.2
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 2.3e-78 296.6 224 67.0
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 5.1e-78 295.4 264 58.0
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 3.8e-73 279.3 237 65.4
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 7.9e-71 271.6 182 74.2
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.0e-70 271.2 322 48.8
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 9.0e-67 258.1 236 61.4
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 5.8e-66 255.4 226 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 8.4e-65 251.5 196 60.7
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.4e-64 250.8 201 59.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 3.1e-59 233.0 241 59.3
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.0e-57 228.0 209 54.5
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 2.0e-50 203.8 253 45.1
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 6.9e-43 178.7 162 54.3
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.2e-42 177.9 200 44.0
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.5e-42 177.6 208 43.8
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 3.0e-38 163.3 123 61.0
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.7e-31 140.2 79 78.5
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 3.0e-30 136.7 120 52.5
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.4e-29 132.9 99 69.7
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 5.3e-27 125.9 87 74.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.0e-22 111.7 75 76.0
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 1.4e-22 111.3 60 90.0
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 2.0e-13 80.9 121 48.8
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.6e-07 61.2 37 78.4
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.8e-07 60.5 134 29.9


User provided reference genes

Program Settings