Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p078918 Quercus lobata HOM05D006742 ORTHO05D008755 8.6e-198 693.3 325 100.0
QL02p078804 Quercus lobata HOM05D006742 ORTHO05D008755 4.6e-143 511.5 327 79.2
QL02p078604 Quercus lobata HOM05D006742 ORTHO05D008755 6.0e-66 255.4 352 44.3
QL02p078704 Quercus lobata HOM05D006742 ORTHO05D008755 3.3e-64 249.6 300 51.3
QL02p078719 Quercus lobata HOM05D006742 ORTHO05D008755 9.6e-64 248.1 313 46.0
QL02p078640 Quercus lobata HOM05D006742 ORTHO05D008755 1.3e-63 247.7 360 42.5
QL02p078713 Quercus lobata HOM05D006742 ORTHO05D008755 1.3e-60 237.7 367 40.9
QL02p078611 Quercus lobata HOM05D006742 ORTHO05D008755 7.9e-50 201.8 357 37.5
QL02p078728 Quercus lobata HOM05D006742 ORTHO05D008755 8.1e-47 191.8 366 39.1
QL02p078607 Quercus lobata HOM05D006742 ORTHO05D008755 1.6e-39 167.5 325 34.8
QL02p078831 Quercus lobata HOM05D006742 ORTHO05D008755 2.0e-37 160.6 270 39.3
QL02p078978 Quercus lobata HOM05D006742 ORTHO05D008755 1.9e-35 154.1 314 36.9
QL02p078577 Quercus lobata HOM05D006742 ORTHO05D008755 3.2e-35 153.3 340 32.6
QL02p078737 Quercus lobata HOM05D006742 ORTHO05D008755 1.3e-33 147.9 283 36.7
Cpa.g.sc130.16 Carica papaya HOM05D008753 ORTHO05D010999 3.0e-33 146.7 293 32.1
Duzib264G0176 Durio zibethinus HOM05D006742 ORTHO05D008755 1.8e-30 137.5 296 31.8
Actinidia05928 Actinidia chinensis HOM05D006742 ORTHO05D008755 1.4e-27 127.9 323 31.6
GSVIVG01001831001 Vitis vinifera HOM05D006742 ORTHO05D008755 2.7e-26 123.6 300 28.7
Cpa.g.sc130.19 Carica papaya HOM05D008753 ORTHO05D010999 5.7e-24 115.9 282 25.9
Cpa.g.sc130.17 Carica papaya HOM05D006742 ORTHO05D008755 9.7e-24 115.2 322 27.6
COL.COLO4_08775 Corchorus olitorius HOM05D006742 ORTHO05D008755 3.1e-22 110.2 248 29.4
Cpa.g.sc130.20 Carica papaya HOM05D008753 ORTHO05D010999 2.6e-21 107.1 282 25.2
Lj7C533T3 Lonicera japonica HOM05D006742 ORTHO05D008755 7.7e-21 105.5 261 27.2
COL.COLO4_08779 Corchorus olitorius HOM05D006742 ORTHO05D008755 6.5e-20 102.4 132 38.6
Lj7C532G3 Lonicera japonica HOM05D006742 ORTHO05D008755 2.1e-18 97.4 313 26.5
Lsat_1_v5_gn_4_45300 Lactuca sativa HOM05D006742 ORTHO05D008755 2.3e-17 94.0 126 38.1
Lsat_1_v5_gn_4_45120 Lactuca sativa HOM05D006742 ORTHO05D008755 2.6e-16 90.5 287 25.4
COL.COLO4_08771 Corchorus olitorius HOM05D006742 ORTHO05D008755 5.7e-16 89.4 104 37.5
Lsat_1_v5_gn_7_60861 Lactuca sativa HOM05D006742 ORTHO05D008755 5.7e-16 89.4 129 35.7
Lsat_1_v5_gn_4_42841 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-15 88.2 122 36.1
Lsat_1_v5_gn_4_45700 Lactuca sativa HOM05D006742 ORTHO05D008755 3.7e-15 86.7 128 36.7
Lsat_1_v5_gn_4_42801 Lactuca sativa HOM05D006742 ORTHO05D008755 1.4e-14 84.7 148 34.5
Lsat_1_v5_gn_4_42821 Lactuca sativa HOM05D006742 ORTHO05D008755 3.1e-14 83.6 131 33.6
Lsat_1_v5_gn_4_42761 Lactuca sativa HOM05D006742 ORTHO05D008755 4.1e-14 83.2 105 38.1
Lsat_1_v5_gn_4_45581 Lactuca sativa HOM05D006742 ORTHO05D008755 7.0e-14 82.4 128 33.6
Lsat_1_v5_gn_4_44980 Lactuca sativa HOM05D006742 ORTHO05D008755 9.1e-14 82.0 103 37.9
Lsat_1_v5_gn_7_41720 Lactuca sativa HOM05D006742 ORTHO05D008755 9.1e-14 82.0 130 30.8
Lsat_1_v5_gn_4_45220 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-13 81.6 104 35.6
Lsat_1_v5_gn_4_45140 Lactuca sativa HOM05D006742 ORTHO05D008755 1.6e-13 81.3 99 39.4
Lsat_1_v5_gn_2_26361 Lactuca sativa HOM05D006742 ORTHO05D008755 2.6e-13 80.5 307 25.4
Lsat_1_v5_gn_7_41760 Lactuca sativa HOM05D006742 ORTHO05D008755 3.5e-13 80.1 105 36.2
Lsat_1_v5_gn_7_97461 Lactuca sativa HOM05D006742 ORTHO05D008755 4.5e-13 79.7 148 30.4
Lsat_1_v5_gn_5_77921 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-12 78.6 151 33.1
Medtr1g100280 Medicago truncatula HOM05D008753 ORTHO05D010999 1.3e-12 78.2 280 27.1
Lsat_1_v5_gn_4_43561 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-12 77.8 106 34.9
Lsat_1_v5_gn_4_45320 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-12 77.8 95 36.8
Lsat_1_v5_gn_6_15581 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-12 77.8 309 23.0
Lsat_1_v5_gn_7_8020 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-12 77.8 104 36.5
Lsat_1_v5_gn_7_97001 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-12 77.8 113 36.3
Lsat_1_v5_gn_4_41121 Lactuca sativa HOM05D006742 ORTHO05D008755 2.2e-12 77.4 117 32.5
Lsat_1_v5_gn_7_16060 Lactuca sativa HOM05D006742 ORTHO05D008755 2.2e-12 77.4 92 39.1
Lsat_1_v5_gn_4_45260 Lactuca sativa HOM05D006742 ORTHO05D008755 2.9e-12 77.0 91 35.2
Medtr7g070100 Medicago truncatula HOM05D008753 ORTHO05D010999 2.9e-12 77.0 279 24.7
Lsat_1_v5_gn_4_45640 Lactuca sativa HOM05D006742 ORTHO05D008755 5.0e-12 76.3 93 39.8
Psat5g232360 Pisum sativum HOM05D008753 ORTHO05D010999 5.0e-12 76.3 297 25.9
TPR.G27134 Trifolium pratense HOM05D008753 ORTHO05D010999 5.0e-12 76.3 311 23.5
Lsat_1_v5_gn_2_25900 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-11 74.7 323 24.1
Lsat_1_v5_gn_7_41520 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-11 74.3 135 27.4
Medtr3g006100 Medicago truncatula HOM05D008753 ORTHO05D010999 1.9e-11 74.3 276 25.0
Lsat_1_v5_gn_2_26061 Lactuca sativa HOM05D006742 ORTHO05D008755 3.2e-11 73.6 127 30.7
Lsat_1_v5_gn_2_26421 Lactuca sativa HOM05D006742 ORTHO05D008755 3.2e-11 73.6 237 27.8
Medtr3g006120 Medicago truncatula HOM05D008753 ORTHO05D010999 3.2e-11 73.6 276 25.7
TPR.G25527 Trifolium pratense HOM05D008753 ORTHO05D010999 3.2e-11 73.6 296 26.0
Lsat_1_v5_gn_4_180081 Lactuca sativa HOM05D006742 ORTHO05D008755 7.2e-11 72.4 314 23.2
Medtr3g045700 Medicago truncatula HOM05D008753 ORTHO05D010999 7.2e-11 72.4 283 24.4
Lsat_1_v5_gn_7_41940 Lactuca sativa HOM05D006742 ORTHO05D008755 1.6e-10 71.2 142 26.1
Medtr3g006010 Medicago truncatula HOM05D008753 ORTHO05D010999 1.6e-10 71.2 276 23.9
COL.COLO4_08776 Corchorus olitorius HOM05D006742 ORTHO05D008755 2.1e-10 70.9 205 26.3
Lsat_1_v5_gn_5_69760 Lactuca sativa HOM05D000451 ORTHO05D000351 2.1e-10 70.9 91 36.3
Medtr3g006180 Medicago truncatula HOM05D008753 ORTHO05D010999 2.1e-10 70.9 297 25.3
Lsat_1_v5_gn_4_41141 Lactuca sativa HOM05D006742 ORTHO05D008755 3.6e-10 70.1 103 29.1
Lsat_1_v5_gn_4_44960 Lactuca sativa HOM05D006742 ORTHO05D008755 3.6e-10 70.1 104 36.5
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 4.7e-10 69.7 343 20.4
Medtr4g133490 Medicago truncatula HOM05D008753 ORTHO05D010999 6.1e-10 69.3 128 35.9
CSS0023563 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 8.0e-10 68.9 220 26.4
HanXRQChr16g0519811 Helianthus annuus HOM05D006742 ORTHO05D008755 8.0e-10 68.9 127 33.1
Lsat_1_v5_gn_4_40101 Lactuca sativa HOM05D006742 ORTHO05D008755 8.0e-10 68.9 131 30.5
Lsat_1_v5_gn_2_26181 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-09 68.6 92 37.0
Lsat_1_v5_gn_5_74540 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-09 68.6 115 32.2
Lsat_1_v5_gn_5_74560 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-09 68.6 122 29.5
Lsat_1_v5_gn_7_41541 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-09 68.6 86 36.0
Medtr1g089620 Medicago truncatula HOM05D008753 ORTHO05D010999 1.0e-09 68.6 125 34.4
Medtr7g083950 Medicago truncatula HOM05D008753 ORTHO05D010999 1.0e-09 68.6 314 23.6
Lsat_1_v5_gn_7_41620 Lactuca sativa HOM05D006742 ORTHO05D008755 1.8e-09 67.8 142 28.9
Lsat_1_v5_gn_7_98080 Lactuca sativa HOM05D006742 ORTHO05D008755 1.8e-09 67.8 100 34.0
Lsat_1_v5_gn_4_40061 Lactuca sativa HOM05D006742 ORTHO05D008755 2.3e-09 67.4 124 29.8
Lsat_1_v5_gn_7_8000 Lactuca sativa HOM05D006742 ORTHO05D008755 2.3e-09 67.4 114 32.5
Medtr4g133320 Medicago truncatula HOM05D008753 ORTHO05D010999 2.3e-09 67.4 128 35.2
Medtr1g109340 Medicago truncatula HOM05D008753 ORTHO05D010999 4.0e-09 66.6 220 28.2
Cpa.g.sc130.15 Carica papaya HOM05D006742 ORTHO05D008755 5.2e-09 66.2 69 39.1
Lsat_1_v5_gn_4_43681 Lactuca sativa HOM05D006742 ORTHO05D008755 5.2e-09 66.2 121 30.6
Medtr3g085910 Medicago truncatula HOM05D008753 ORTHO05D010999 5.2e-09 66.2 250 24.8
Lsat_1_v5_gn_4_41101 Lactuca sativa HOM05D006742 ORTHO05D008755 6.7e-09 65.9 101 34.7
Lsat_1_v5_gn_7_7980 Lactuca sativa HOM05D006742 ORTHO05D008755 6.7e-09 65.9 90 35.6
Medtr3g006140 Medicago truncatula HOM05D008753 ORTHO05D010999 6.7e-09 65.9 297 22.9
Medtr6g091830 Medicago truncatula HOM05D008753 ORTHO05D010999 6.7e-09 65.9 296 23.3
QL02p078807 Quercus lobata HOM05D006742 ORTHO05D008755 6.7e-09 65.9 83 48.2
Lsat_1_v5_gn_5_77781 Lactuca sativa HOM05D006742 ORTHO05D008755 8.8e-09 65.5 126 30.2
Medtr3g068220 Medicago truncatula HOM05D008753 ORTHO05D010999 8.8e-09 65.5 292 23.3
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-08 65.1 223 26.5
Lsat_1_v5_gn_7_98060 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-08 64.7 138 28.3
Actinidia06437 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.0e-08 64.3 91 37.4
Lsat_1_v5_gn_7_96981 Lactuca sativa HOM05D006742 ORTHO05D008755 2.6e-08 63.9 126 31.0
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.3e-08 63.5 95 34.7
Medtr6g092140 Medicago truncatula HOM05D008753 ORTHO05D010999 3.3e-08 63.5 296 23.0
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 4.4e-08 63.2 91 38.5
CDE05G0110 Ceratophyllum demersum HOM05D000151 ORTHO05D000074 2.2e-07 60.8 88 34.1
DCAR_031513 Daucus carota HOM05D006742 ORTHO05D008755 4.8e-07 59.7 108 31.5
Lalb_Chr03g0043461 Lupinus albus HOM05D008753 ORTHO05D010999 6.3e-07 59.3 90 37.8
Lsat_1_v5_gn_5_78081 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-06 58.5 99 28.3
HanXRQChr16g0520041 Helianthus annuus HOM05D006742 ORTHO05D008755 1.4e-06 58.2 107 30.8
Nn1g04037 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-06 58.2 100 36.0
QL04p009939 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-06 58.2 94 29.8
Lsat_1_v5_gn_2_25261 Lactuca sativa HOM05D006742 ORTHO05D008755 1.8e-06 57.8 215 24.2
RcHm_v2.0_Chr6g0290581 Rosa chinensis HOM05D000151 ORTHO05D000074 1.8e-06 57.8 89 36.0
TPR.G35632 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-06 57.8 159 28.9
Aqoxy7G01775 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-06 57.4 109 33.0
CAN.G630.63 Capsicum annuum HOM05D000151 ORTHO05D000074 2.4e-06 57.4 86 32.6
Lsat_1_v5_gn_7_28681 Lactuca sativa HOM05D006742 ORTHO05D008755 2.4e-06 57.4 97 30.9
Lalb_Chr19g0124261 Lupinus albus HOM05D008753 ORTHO05D010999 2.4e-06 57.4 160 28.8
HanXRQChr16g0520091 Helianthus annuus HOM05D006742 ORTHO05D008755 3.1e-06 57.0 107 30.8
HanXRQChr16g0520101 Helianthus annuus HOM05D006742 ORTHO05D008755 3.1e-06 57.0 107 30.8
Lsat_1_v5_gn_2_25961 Lactuca sativa HOM05D006742 ORTHO05D008755 3.1e-06 57.0 127 25.2
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 3.1e-06 57.0 88 36.4
Peaxi162Scf00078g00513 Petunia axillaris HOM05D000151 ORTHO05D000074 3.1e-06 57.0 88 37.5
Peaxi162Scf00078g00539 Petunia axillaris HOM05D000151 ORTHO05D000074 3.1e-06 57.0 88 37.5
Peaxi162Scf00078g00540 Petunia axillaris HOM05D000151 ORTHO05D000074 3.1e-06 57.0 88 37.5
RcHm_v2.0_Chr6g0290601 Rosa chinensis HOM05D000151 ORTHO05D000074 3.1e-06 57.0 89 36.0
HanXRQChr16g0519851 Helianthus annuus HOM05D006742 ORTHO05D008755 5.3e-06 56.2 129 27.1
Lsat_1_v5_gn_2_26121 Lactuca sativa HOM05D006742 ORTHO05D008755 5.3e-06 56.2 89 33.7
Lsat_1_v5_gn_2_26580 Lactuca sativa HOM05D006742 ORTHO05D008755 5.3e-06 56.2 90 31.1
Medtr6g023220 Medicago truncatula HOM05D008753 ORTHO05D010999 5.3e-06 56.2 144 27.1
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.3e-06 56.2 88 38.6
Medtr1g093300 Medicago truncatula HOM05D008753 ORTHO05D010999 7.0e-06 55.8 98 37.8
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.0e-06 55.8 209 23.4
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 9.1e-06 55.5 91 31.9


User provided reference genes

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