Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p078505 Quercus lobata HOM05D008898 ORTHO05D001155 7.9e-151 537.0 248 100.0
CAN.G1110.53 Capsicum annuum HOM05D001729 ORTHO05D001155 9.7e-24 114.8 216 31.9
Sopen10g002860 Solanum pennellii HOM05D008898 ORTHO05D001155 6.3e-23 112.1 201 30.8
PGSC0003DMG400025009 Solanum tuberosum HOM05D008898 ORTHO05D001155 1.4e-22 110.9 201 31.3
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 1.0e-20 104.8 198 31.8
HanXRQChr15g0474381 Helianthus annuus HOM05D008898 ORTHO05D001155 2.2e-20 103.6 192 31.8
Dinv35017 Davidia involucrata HOM05D008898 ORTHO05D001155 6.5e-20 102.1 191 31.9
Nitab4.5_0002383g0130 Nicotiana tabacum HOM05D008898 ORTHO05D001155 6.5e-20 102.1 196 31.6
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 1.1e-19 101.3 192 31.2
HanXRQChr01g0029461 Helianthus annuus HOM05D008898 ORTHO05D001155 3.2e-19 99.8 201 30.8
Lsat_1_v5_gn_5_38200 Lactuca sativa HOM05D008898 ORTHO05D001155 4.2e-19 99.4 192 30.2
HanXRQChr15g0474391 Helianthus annuus HOM05D008898 ORTHO05D001155 5.5e-19 99.0 188 30.9
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 2.7e-18 96.7 194 29.9
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 2.7e-18 96.7 194 29.9
HanXRQChr15g0474341 Helianthus annuus HOM05D008898 ORTHO05D001155 3.6e-18 96.3 189 30.2
Lsat_1_v5_gn_5_38761 Lactuca sativa HOM05D008898 ORTHO05D001155 1.4e-17 94.4 211 28.9
Lsat_1_v5_gn_5_38300 Lactuca sativa HOM05D008898 ORTHO05D001155 3.9e-17 92.8 191 27.7
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 1.5e-16 90.9 190 29.5
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 2.0e-16 90.5 190 29.5
Dinv34857 Davidia involucrata HOM05D001729 ORTHO05D001155 3.3e-16 89.7 185 29.7
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 3.3e-16 89.7 190 29.5
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 7.4e-16 88.6 182 33.0
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 7.4e-16 88.6 194 29.4
Lsat_1_v5_gn_5_38981 Lactuca sativa HOM05D008898 ORTHO05D001155 3.7e-15 86.3 203 28.6
HanXRQChr17g0547181 Helianthus annuus HOM05D008898 ORTHO05D001155 4.8e-15 85.9 190 29.5
ECA246G1437 Erigeron canadensis HOM05D008898 ORTHO05D001155 6.9e-14 82.0 190 28.4
SGA_v2.0_scaffold1G00575 Striga asiatica HOM05D001729 ORTHO05D001155 6.9e-14 82.0 207 29.0
PGSC0003DMG400002644 Solanum tuberosum HOM05D008898 ORTHO05D001155 2.0e-13 80.5 155 33.5
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 2.6e-13 80.1 194 29.9
Lj7A407T50 Lonicera japonica HOM05D008898 ORTHO05D001155 5.9e-13 79.0 138 32.6
SGA_v2.0_scaffold232G43501 Striga asiatica HOM05D001729 ORTHO05D001155 2.2e-12 77.0 189 26.5
DCAR_004585 Daucus carota HOM05D001729 ORTHO05D001155 1.4e-11 74.3 206 27.2
AL3G39540 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.5e-11 73.6 177 28.2
AUR62020544 Chenopodium quinoa HOM05D017185 ORTHO05D002895 2.5e-11 73.6 201 25.4
AL3G39570 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.1e-10 70.5 177 30.5
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 3.6e-10 69.7 213 25.4
Carub.0004s2674 Capsella rubella HOM05D002743 ORTHO05D002895 4.7e-10 69.3 194 28.4
QL05p065010 Quercus lobata HOM05D001729 ORTHO05D001155 4.7e-10 69.3 217 27.2
AL3G39550 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.1e-10 68.9 200 27.5
AUR62035624 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.0e-09 68.2 193 26.4
AT3G23950 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 1.4e-09 67.8 178 29.8
Carub.0007s1819 Capsella rubella HOM05D002743 ORTHO05D002895 1.4e-09 67.8 186 28.0
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 1.8e-09 67.4 195 27.7
CARHR100280 Cardamine hirsuta HOM05D002743 ORTHO05D002895 3.9e-09 66.2 188 28.7
BraA01t01181Z Brassica rapa HOM05D002743 ORTHO05D002895 8.8e-09 65.1 190 28.4
CARHR033610 Cardamine hirsuta HOM05D002743 ORTHO05D002895 8.8e-09 65.1 186 28.5
BcaNung04712 Brassica carinata HOM05D002743 ORTHO05D002895 2.0e-08 63.9 183 30.1
CARHR288580 Cardamine hirsuta HOM05D002743 ORTHO05D002895 2.0e-08 63.9 156 30.1
AL5G16370 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.3e-08 63.2 270 24.8
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 7.4e-08 62.0 255 26.7
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 1.3e-07 61.2 209 27.8
A01p12360 Brassica napus HOM05D002743 ORTHO05D002895 2.8e-07 60.1 158 28.5
Prupe.8G110700 Prunus persica HOM05D001729 ORTHO05D001155 2.8e-07 60.1 224 27.2
AT3G28223 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 4.8e-07 59.3 202 29.7
BolC1t01435H Brassica oleracea HOM05D002743 ORTHO05D002895 8.2e-07 58.5 189 30.7
PSO339G3291 Papaver somniferum HOM05D008326 ORTHO05D001155 1.4e-06 57.8 233 26.2
FvH4_6g02041 Fragaria vesca HOM05D001729 ORTHO05D001155 1.8e-06 57.4 207 25.6
FAN14G5126 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-06 57.4 185 29.7
BcaNung04711 Brassica carinata HOM05D002743 ORTHO05D002895 4.1e-06 56.2 159 28.9
AUR62031620 Chenopodium quinoa HOM05D001340 ORTHO05D005342 5.3e-06 55.8 95 31.6
FAN09G4011 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.0e-06 55.5 184 29.3
PSO591G0471 Papaver somniferum HOM05D008326 ORTHO05D001155 7.0e-06 55.5 181 24.9
FvH4_6g03181 Fragaria vesca HOM05D001729 ORTHO05D001155 9.1e-06 55.1 184 29.3


User provided reference genes

Program Settings