Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p077216 Quercus lobata HOM05D000028 ORTHO05D337423 2.7e-39 164.9 82 100.0
QL02p077174 Quercus lobata HOM05D000028 ORTHO05D000390 1.8e-14 82.4 54 74.1
Ciclev10017903m.g Citrus clementina HOM05D000028 ORTHO05D000390 7.6e-10 67.0 54 61.1
Dinv35032 Davidia involucrata HOM05D000028 ORTHO05D000390 1.3e-09 66.2 50 64.0
Atru.chr6.2175 Acer truncatum HOM05D000028 ORTHO05D000390 4.2e-08 61.2 52 63.5
Lj7A409G59 Lonicera japonica HOM05D000028 ORTHO05D000390 4.2e-08 61.2 61 57.4
TAR629G2335 Trochodendron aralioides HOM05D000028 ORTHO05D000390 5.5e-08 60.8 55 58.2
Dinv31009 Davidia involucrata HOM05D000028 ORTHO05D000390 2.7e-07 58.5 55 58.2
Dinv31093 Davidia involucrata HOM05D000028 ORTHO05D000390 2.7e-07 58.5 55 58.2
TAR629G0698 Trochodendron aralioides HOM05D000028 ORTHO05D000390 3.5e-07 58.2 55 58.2
ECA246G0347 Erigeron canadensis HOM05D000028 ORTHO05D000390 4.6e-07 57.8 54 51.9
RcHm_v2.0_Chr2g0170801 Rosa chinensis HOM05D000028 ORTHO05D000390 6.1e-07 57.4 55 54.5
Duzib248G0919 Durio zibethinus HOM05D000028 ORTHO05D000390 7.9e-07 57.0 55 54.5
Glyma.02G032500 Glycine max HOM05D000028 ORTHO05D000390 1.0e-06 56.6 71 45.1
Hma1.2p1_0967F.1_g242330 Hydrangea macrophylla HOM05D000028 ORTHO05D000390 1.0e-06 56.6 54 48.1
MD09G1036400 Malus domestica HOM05D000028 ORTHO05D000390 1.0e-06 56.6 60 50.0
TAR629G0949 Trochodendron aralioides HOM05D000028 ORTHO05D000390 1.3e-06 56.2 53 58.5
GSVIVG01032509001 Vitis vinifera HOM05D000028 ORTHO05D000390 2.3e-06 55.5 55 54.5
Dinv31010 Davidia involucrata HOM05D000028 ORTHO05D000390 3.0e-06 55.1 56 50.0
Dinv31092 Davidia involucrata HOM05D000028 ORTHO05D000390 3.0e-06 55.1 56 50.0
HanXRQChr17g0547981 Helianthus annuus HOM05D000028 ORTHO05D000390 5.1e-06 54.3 54 46.3
Rhsim12G0123100 Rhododendron simsii HOM05D000028 ORTHO05D000390 5.1e-06 54.3 50 50.0
RcHm_v2.0_Chr2g0170821 Rosa chinensis HOM05D000028 ORTHO05D000390 5.1e-06 54.3 64 50.0
RcHm_v2.0_Chr2g0170831 Rosa chinensis HOM05D000028 ORTHO05D000390 5.1e-06 54.3 56 51.8
Thecc.04G006100 Theobroma cacao HOM05D000028 ORTHO05D000390 5.1e-06 54.3 55 50.9
FvH4_6g50420 Fragaria vesca HOM05D000028 ORTHO05D000390 6.7e-06 53.9 65 50.8
Glyma.01G033500 Glycine max HOM05D000028 ORTHO05D000390 8.7e-06 53.5 70 45.7


User provided reference genes

Program Settings