Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.1e-63 246.5 124 100.0
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.1e-63 246.5 124 100.0
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 3.5e-59 231.5 124 91.1
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 7.9e-59 230.3 124 91.1
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 4.3e-57 224.6 124 87.1
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 2.0e-54 215.7 124 83.1
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 1.2e-51 206.5 124 80.6
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 3.5e-51 204.9 124 79.8
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 4.6e-51 204.5 122 80.3
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 4.6e-51 204.5 124 79.0
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.8e-50 202.6 124 79.0
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.8e-50 202.6 124 79.0
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 2.3e-50 202.2 123 78.9
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 3.9e-50 201.4 117 82.1
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.5e-49 199.5 122 77.9
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.5e-49 199.5 124 74.2
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 7.4e-49 197.2 124 75.0
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.4e-49 197.2 122 74.6
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 7.4e-49 197.2 124 75.8
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 7.4e-49 197.2 119 79.8
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.3e-48 196.4 118 78.0
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 2.2e-48 195.7 122 76.2
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 2.2e-48 195.7 117 79.5
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 2.2e-48 195.7 124 75.0
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 8.2e-48 193.7 117 80.3
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 1.1e-47 193.4 117 77.8
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 1.1e-47 193.4 124 72.6
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.8e-47 192.6 122 73.0
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 2.4e-47 192.2 122 71.3
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 3.1e-47 191.8 118 77.1
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 6.9e-47 190.7 124 71.8
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 6.9e-47 190.7 124 71.0
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 1.2e-46 189.9 123 74.0
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.0e-46 189.1 124 71.8
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 2.0e-46 189.1 116 78.4
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 5.9e-46 187.6 124 75.0
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.9e-46 187.6 124 75.0
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 5.9e-46 187.6 124 74.2
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 7.7e-46 187.2 124 74.2
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 1.0e-45 186.8 124 70.2
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.3e-45 186.4 123 69.1
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.3e-45 186.4 123 68.3
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.7e-45 186.0 124 71.0
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.7e-45 186.0 124 74.2
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 1.7e-45 186.0 124 70.2
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 2.9e-45 185.3 124 71.0
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 2.9e-45 185.3 124 71.0
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 2.9e-45 185.3 123 72.4
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 2.9e-45 185.3 124 71.0
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 5.0e-45 184.5 124 71.0
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 6.5e-45 184.1 124 67.7
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 8.5e-45 183.7 124 69.4
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 8.5e-45 183.7 124 69.4
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 8.5e-45 183.7 124 69.4
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 8.5e-45 183.7 116 75.9
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.1e-44 183.3 123 74.8
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.1e-44 183.3 123 68.3
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.4e-44 183.0 124 68.5
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.9e-44 182.6 123 72.4
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 2.5e-44 182.2 124 65.3
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 2.5e-44 182.2 124 68.5
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 2.5e-44 182.2 124 71.0
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 3.2e-44 181.8 124 70.2
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 3.2e-44 181.8 124 68.5
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 4.2e-44 181.4 124 69.4
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 5.5e-44 181.0 120 73.3
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 7.2e-44 180.6 124 68.5
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 7.2e-44 180.6 124 67.7
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 1.2e-43 179.9 124 69.4
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 1.2e-43 179.9 119 73.1
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-43 179.9 117 71.8
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 1.2e-43 179.9 134 67.9
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.6e-43 179.5 124 67.7
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 1.6e-43 179.5 124 68.5
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-43 179.5 124 68.5
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 1.6e-43 179.5 124 68.5
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 3.6e-43 178.3 119 72.3
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 6.1e-43 177.6 121 68.6
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 7.9e-43 177.2 120 69.2
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.4e-42 176.4 119 71.4
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.3e-42 175.6 118 70.3
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 3.0e-42 175.3 120 70.8
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 3.0e-42 175.3 105 79.0
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 8.8e-42 173.7 122 66.4
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.5e-41 172.9 117 69.2
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.0e-41 172.6 104 78.8
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 2.0e-41 172.6 121 69.4
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 2.5e-41 172.2 117 67.5
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.3e-41 171.8 146 58.9
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 7.4e-41 170.6 111 72.1
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 7.4e-41 170.6 104 76.0
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 3.7e-40 168.3 136 62.5
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.3e-40 167.5 105 76.2
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 8.2e-40 167.2 145 58.6
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 5.3e-39 164.5 118 66.1
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 1.2e-38 163.3 112 69.6
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 2.0e-38 162.5 101 76.2
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 4.5e-38 161.4 120 64.2
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 5.0e-37 157.9 101 72.3
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 5.0e-37 157.9 123 64.2
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 6.5e-37 157.5 128 63.3
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 3.2e-36 155.2 118 68.6
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 5.5e-36 154.5 216 43.1
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.2e-35 153.3 101 70.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.1e-35 152.5 130 62.3
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 5.1e-34 147.9 124 59.7
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.1e-33 146.7 117 59.8
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 2.6e-33 145.6 83 80.7
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 4.4e-33 144.8 126 55.6
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 6.3e-32 141.0 87 78.2
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 6.3e-32 141.0 106 65.1
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 4.1e-31 138.3 101 62.4
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.1e-28 130.2 104 62.5
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 7.2e-28 127.5 80 77.5
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 1.4e-26 123.2 68 77.9
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 5.2e-26 121.3 115 57.4
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.7e-24 116.3 72 70.8
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 3.7e-24 115.2 127 45.7
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 4.8e-24 114.8 73 75.3
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 4.1e-23 111.7 74 67.6
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 1.7e-21 106.3 88 54.5
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 1.1e-20 103.6 90 61.1
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 4.2e-20 101.7 181 38.1
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 1.0e-18 97.1 70 65.7
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 3.0e-18 95.5 61 73.8
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 2.8e-16 89.0 121 37.2
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 2.9e-13 79.0 50 74.0
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 8.5e-13 77.4 47 72.3
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 4.7e-11 71.6 130 36.9
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.6e-06 56.6 106 34.9


User provided reference genes

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