Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p074974 Quercus lobata HOM05D007358 ORTHO05D009117 6.1e-40 169.5 461 100.0
QL02p075081 Quercus lobata HOM05D007358 ORTHO05D009117 8.6e-34 149.1 71 98.6
QL06p022929 Quercus lobata HOM05D007358 ORTHO05D009117 2.6e-30 137.5 71 91.5
Haze_14729 Corylus avellana HOM05D007358 ORTHO05D009117 9.8e-30 135.6 80 82.5
Cfa007380 Carpinus fangiana HOM05D007358 ORTHO05D009117 1.4e-28 131.7 80 80.0
CiPaw.03G042400 Carya illinoinensis HOM05D007358 ORTHO05D009117 3.3e-25 120.6 80 71.2
Prupe.3G290200 Prunus persica HOM05D007358 ORTHO05D009117 1.6e-24 118.2 80 67.5
CANSAT64G1792 Cannabis sativa HOM05D007358 ORTHO05D009117 3.6e-24 117.1 80 66.2
RcHm_v2.0_Chr2g0173011 Rosa chinensis HOM05D007358 ORTHO05D009117 3.6e-24 117.1 81 65.4
MD09G1028300 Malus domestica HOM05D007358 ORTHO05D009117 1.8e-23 114.8 81 72.8
TWI12G0702 Tripterygium wilfordii HOM05D007358 ORTHO05D009117 5.2e-23 113.2 80 63.8
FAN04G0278 Fragaria x ananassa HOM05D007358 ORTHO05D009117 6.8e-23 112.8 81 63.0
FAN04G1709 Fragaria x ananassa HOM05D007358 ORTHO05D009117 6.8e-23 112.8 81 63.0
FvH4_5g31860 Fragaria vesca HOM05D007358 ORTHO05D009117 7.5e-22 109.4 81 63.0
Ciclev10018361m.g Citrus clementina HOM05D007358 ORTHO05D009117 9.9e-22 109.0 80 62.5
Eucgr.I01754 Eucalyptus grandis HOM05D007358 ORTHO05D009117 1.3e-21 108.6 79 59.5
Potri.017G071600 Populus trichocarpa HOM05D007358 ORTHO05D009117 1.3e-21 108.6 74 62.2
Glyma.05G004200 Glycine max HOM05D007358 ORTHO05D009117 2.2e-21 107.8 84 59.5
GSVIVG01008360001 Vitis vinifera HOM05D007358 ORTHO05D009117 3.7e-21 107.1 80 58.8
Sabra17G0060800 Salix brachista HOM05D007358 ORTHO05D009117 4.9e-21 106.7 74 60.8
Ca_04155_v3 Cicer arietinum L. HOM05D007358 ORTHO05D009117 8.3e-21 105.9 80 65.0
TPR.G14066 Trifolium pratense HOM05D007358 ORTHO05D009117 1.1e-20 105.5 80 62.5
ClCG09G019220 Citrullus lanatus HOM05D007358 ORTHO05D009117 1.9e-20 104.8 80 60.0
Manes.17G021400 Manihot esculenta HOM05D007358 ORTHO05D009117 1.9e-20 104.8 80 61.2
Atru.BG.30.p Acer truncatum HOM05D007358 ORTHO05D009117 2.4e-20 104.4 80 61.2
Dinv33449 Davidia involucrata HOM05D007358 ORTHO05D009117 2.4e-20 104.4 80 62.5
Medtr6g005000 Medicago truncatula HOM05D007358 ORTHO05D009117 4.1e-20 103.6 82 63.4
VMungo0464G1987 Vigna mungo HOM05D007358 ORTHO05D009117 5.4e-20 103.2 84 57.1
Phvul.004G009945 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 7.1e-20 102.8 84 57.1
Lalb_Chr24g0394951 Lupinus albus HOM05D007358 ORTHO05D009117 9.2e-20 102.4 80 60.0
Sed0015079 Sechium edule HOM05D007358 ORTHO05D009117 9.2e-20 102.4 80 57.5
Lj2C1075G10 Lonicera japonica HOM05D007358 ORTHO05D009117 2.1e-19 101.3 80 56.2
Lj2g0013463 Lotus japonicus HOM05D007358 ORTHO05D009117 2.7e-19 100.9 81 56.8
Cpa.g.sc108.57 Carica papaya HOM05D007358 ORTHO05D009117 3.5e-19 100.5 80 55.0
Thecc.04G015800 Theobroma cacao HOM05D007358 ORTHO05D009117 3.5e-19 100.5 78 61.5
COL.COLO4_29095 Corchorus olitorius HOM05D007358 ORTHO05D009117 6.0e-19 99.8 80 57.5
CsaV3_5G027190 Cucumis sativus L. HOM05D007358 ORTHO05D009117 6.0e-19 99.8 80 56.2
Phvul.003G017200 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.3e-18 98.6 84 53.6
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 2.3e-18 97.8 80 57.5
Phvul.004G009809 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 2.3e-18 97.8 84 53.6
Nn2g12649 Nelumbo nucifera HOM05D007358 ORTHO05D009117 3.0e-18 97.4 72 58.3
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 3.9e-18 97.1 80 55.0
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 3.9e-18 97.1 80 55.0
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 3.9e-18 97.1 83 51.8
Phvul.004G009641 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 3.9e-18 97.1 84 53.6
CSS0000420 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 5.1e-18 96.7 80 58.8
CSS0010405 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 6.6e-18 96.3 80 57.5
A04p13440 Brassica napus HOM05D007358 ORTHO05D009117 1.5e-17 95.1 80 55.0
Cc09_g03920 Coffea canephora HOM05D007358 ORTHO05D009117 1.5e-17 95.1 80 55.0
Gohir.D11G070700 Gossypium hirsutum HOM05D007358 ORTHO05D009117 1.9e-17 94.7 78 57.7
Gorai.007G075800 Gossypium raimondii HOM05D007358 ORTHO05D009117 1.9e-17 94.7 78 57.7
AUR62023937 Chenopodium quinoa HOM05D007358 ORTHO05D009117 2.5e-17 94.4 83 56.6
Phvul.004G009900 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 2.5e-17 94.4 84 52.4
Sc03g0011070 Simmondsia chinensis HOM05D007358 ORTHO05D009117 2.5e-17 94.4 75 60.0
BcaB06g27500 Brassica carinata HOM05D007358 ORTHO05D009117 3.3e-17 94.0 79 54.4
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 3.3e-17 94.0 80 53.8
HanXRQChr17g0537401 Helianthus annuus HOM05D007358 ORTHO05D009117 4.3e-17 93.6 81 54.3
Gohir.A11G066500 Gossypium hirsutum HOM05D007358 ORTHO05D009117 7.3e-17 92.8 77 57.1
MBI17_g07976_MAGBIO Magnolia biondii HOM05D007358 ORTHO05D009117 7.3e-17 92.8 80 56.2
Psat1g055280 Pisum sativum HOM05D007358 ORTHO05D009117 7.3e-17 92.8 80 55.0
THA.LOC104805375 Tarenaya hassleriana HOM05D007358 ORTHO05D009117 1.2e-16 92.0 80 50.0
vmacro05457 Vaccinium macrocarpon HOM05D007358 ORTHO05D009117 1.2e-16 92.0 80 53.8
Ah.01g004590 Amaranthus hybridus HOM05D007358 ORTHO05D009117 1.6e-16 91.7 75 56.0
Hma1.2p1_0013F.1_g008830 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.6e-16 91.7 80 58.8
Hma1.2p1_0013F.1_g008840 Hydrangea macrophylla HOM05D007358 ORTHO05D009117 1.6e-16 91.7 80 58.8
AL7G49460 Arabidopsis lyrata HOM05D007358 ORTHO05D009117 2.1e-16 91.3 77 51.9
Lsat_1_v5_gn_3_20581 Lactuca sativa HOM05D007358 ORTHO05D009117 3.6e-16 90.5 77 50.6
Sp7g01520 Schrenkiella parvula HOM05D007358 ORTHO05D009117 6.2e-16 89.7 80 51.2
SGA_v2.0_scaffold122G33180 Striga asiatica HOM05D007358 ORTHO05D009117 1.1e-15 89.0 80 50.0
Aa31LG9G1210 Aethionema arabicum HOM05D007358 ORTHO05D009117 2.4e-15 87.8 80 47.5
CARHR261620 Cardamine hirsuta HOM05D007358 ORTHO05D009117 2.4e-15 87.8 80 47.5
CSS0022172 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 3.1e-15 87.4 75 57.3
Thhalv10027688m.g Eutrema salsugineum HOM05D007358 ORTHO05D009117 3.1e-15 87.4 77 50.6
Solyc03g007390.4 Solanum lycopersicum HOM05D007358 ORTHO05D009117 5.2e-15 86.7 80 52.5
AT5G40400 Arabidopsis thaliana HOM05D007358 ORTHO05D009117 6.8e-15 86.3 77 50.6
MSTRG.8212 Avicennia marina HOM05D007358 ORTHO05D009117 8.9e-15 85.9 61 57.4
EL10Ac9g21083 Beta vulgaris HOM05D007358 ORTHO05D009117 8.9e-15 85.9 76 55.3
PGR142G1723 Punica granatum HOM05D007358 ORTHO05D009117 8.9e-15 85.9 79 50.6
Actinidia06003 Actinidia chinensis HOM05D007358 ORTHO05D009117 1.2e-14 85.5 71 59.2
Rhsim11G0131500 Rhododendron simsii HOM05D007358 ORTHO05D009117 1.2e-14 85.5 73 54.8
SalBow6G1669 Salvia bowleyana HOM05D007358 ORTHO05D009117 1.2e-14 85.5 81 48.1
Carub.0007s3520 Capsella rubella HOM05D007358 ORTHO05D009117 1.5e-14 85.1 79 49.4
DCAR_000707 Daucus carota HOM05D007358 ORTHO05D009117 1.5e-14 85.1 82 50.0
Nitab4.5_0004652g0010 Nicotiana tabacum HOM05D007358 ORTHO05D009117 1.5e-14 85.1 80 51.2
Oeu037939.3 Olea europaea HOM05D007358 ORTHO05D009117 3.4e-14 84.0 81 48.1
SHI16405 Sapria himalayana HOM05D007358 ORTHO05D009117 3.4e-14 84.0 80 47.5
Sopen03g003350 Solanum pennellii HOM05D007358 ORTHO05D009117 4.4e-14 83.6 80 51.2
Hund17802 Selenicereus undatus HOM05D007358 ORTHO05D009117 5.8e-14 83.2 75 58.7
Nitab4.5_0000080g0200 Nicotiana tabacum HOM05D007358 ORTHO05D009117 7.6e-14 82.8 84 48.8
CAN.G108.28 Capsicum annuum HOM05D007358 ORTHO05D009117 9.9e-14 82.4 80 50.0
Migut.F01873 Erythranthe guttata HOM05D007358 ORTHO05D009117 1.3e-13 82.0 83 43.4
PGSC0003DMG400009102 Solanum tuberosum HOM05D007358 ORTHO05D009117 2.9e-13 80.9 80 50.0
CDE04G1234 Ceratophyllum demersum HOM05D007358 ORTHO05D009117 2.1e-11 74.7 80 42.5
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 2.7e-11 74.3 71 42.3
Rhsim10G0018200 Rhododendron simsii HOM05D007358 ORTHO05D009117 1.2e-08 65.5 64 54.7
CSS0028376 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 1.4e-07 62.0 52 57.7
SEGI_31001 Sequoiadendron giganteum HOM05D007358 ORTHO05D009117 9.0e-07 59.3 62 45.2
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 7.6e-06 56.2 74 36.5


User provided reference genes

Program Settings