Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p074766 Quercus lobata HOM05D018456 ORTHO05D024862 0.0e+00 14047.8 7742 100.0
Haze_14737 Corylus avellana HOM05D018456 ORTHO05D024862 0.0e+00 2598.2 8294 34.2
Cfa007371 Carpinus fangiana HOM05D018456 ORTHO05D024862 0.0e+00 2367.4 7913 33.8
CiPaw.03G043400 Carya illinoinensis HOM05D018456 ORTHO05D024862 2.7e-281 975.3 2656 36.0
Potri.001G345300 Populus trichocarpa HOM05D013434 ORTHO05D014659 1.4e-75 292.0 4477 24.3
Dinv35105 Davidia involucrata HOM05D008944 ORTHO05D012715 3.6e-68 267.3 3348 24.0
GSVIVG01032411001 Vitis vinifera HOM05D000662 ORTHO05D012715 5.3e-59 236.9 2918 24.1
Atru.chr6.2390 Acer truncatum HOM05D008944 ORTHO05D012260 4.9e-57 230.3 4500 23.3
Ciclev10014006m.g Citrus clementina HOM05D018456 ORTHO05D012260 1.3e-49 205.7 3683 24.2
CiPaw.03G043500 Carya illinoinensis HOM05D018456 ORTHO05D024862 8.4e-49 203.0 971 28.8
TAR622G0299 Trochodendron aralioides HOM05D008944 ORTHO05D012715 1.0e-46 196.1 2919 23.8
Sabra16G0224300 Salix brachista HOM05D013434 ORTHO05D014659 1.1e-45 192.6 4034 23.5
TAR622G0869 Trochodendron aralioides HOM05D008944 ORTHO05D012260 6.2e-44 186.8 249 50.6
CSS0002578 Camellia sinensis var. sinensis HOM05D008944 ORTHO05D012715 2.0e-42 181.8 2130 23.5
Dinv33443 Davidia involucrata HOM05D008944 ORTHO05D012715 1.2e-39 172.6 4739 22.6
RcHm_v2.0_Chr2g0172861 Rosa chinensis HOM05D011862 ORTHO05D014222 6.7e-38 166.8 2001 24.2
Thecc.04G017000 Theobroma cacao HOM05D010821 ORTHO05D012260 2.4e-35 158.3 5010 23.0
Hma1.2p1_0999F.1_g246230 Hydrangea macrophylla HOM05D008944 ORTHO05D012260 5.5e-32 147.1 242 44.6
Lju41A41T31 Lonicera japonica HOM05D008944 ORTHO05D012260 3.0e-30 141.4 392 35.7
Duzib187G0676 Durio zibethinus HOM05D010821 ORTHO05D012260 2.0e-29 138.7 1438 24.8
Duzib187G0380 Durio zibethinus HOM05D010821 ORTHO05D012260 1.0e-25 126.3 1342 24.3
TAR374G0977 Trochodendron aralioides HOM05D008944 ORTHO05D012715 7.2e-24 120.2 344 33.1
Cc07_g01740 Coffea canephora HOM05D008944 ORTHO05D012260 9.1e-19 103.2 184 44.6
Actinidia36113 Actinidia chinensis HOM05D008944 ORTHO05D017205 5.9e-18 100.5 1679 24.0
GSVIVG01032410001 Vitis vinifera HOM05D008944 ORTHO05D012715 3.8e-17 97.8 1523 23.6
Duzib264G0142 Durio zibethinus HOM05D010821 ORTHO05D012260 2.5e-16 95.1 1414 24.6
Nitab4.5_0002468g0060 Nicotiana tabacum HOM05D012441 ORTHO05D013726 1.6e-15 92.4 424 29.2
Prupe.3G291300 Prunus persica HOM05D011862 ORTHO05D014222 2.7e-15 91.7 3984 23.4
COL.COLO4_29109 Corchorus olitorius HOM05D010821 ORTHO05D012260 4.7e-15 90.9 1715 22.9
PGSC0003DMG400012631 Solanum tuberosum HOM05D012441 ORTHO05D013726 1.0e-14 89.7 148 44.6
Nitab4.5_0007124g0010 Nicotiana tabacum HOM05D012441 ORTHO05D013726 6.7e-14 87.0 431 29.2
Duzib147G0652 Durio zibethinus HOM05D010821 ORTHO05D029264 5.7e-13 84.0 2396 22.2
Sopen02g031170 Solanum pennellii HOM05D012441 ORTHO05D013726 3.7e-12 81.3 260 33.8
Cpa.g.sc108.66 Carica papaya HOM05D008944 ORTHO05D012260 1.8e-11 79.0 239 37.7
Sabra04G0084900 Salix brachista HOM05D013434 ORTHO05D014659 5.9e-10 73.9 249 30.5
RhsimUnG0016800 Rhododendron simsii HOM05D008944 ORTHO05D012715 7.7e-10 73.6 226 33.2
vmacro18281 Vaccinium macrocarpon HOM05D008944 ORTHO05D012715 5.0e-09 70.9 340 28.5
Actinidia05998 Actinidia chinensis HOM05D008944 ORTHO05D017205 1.1e-08 69.7 604 27.0
Lju41C41G6 Lonicera japonica HOM05D008944 ORTHO05D012715 4.7e-07 64.3 1857 23.9
Sabra17G0015400 Salix brachista HOM05D013434 ORTHO05D014659 6.7e-06 60.5 224 28.1


User provided reference genes

Program Settings