Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 7.1e-62 240.4 116 100.0
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.7e-51 204.1 116 85.3
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 9.7e-51 203.4 116 87.1
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.8e-49 199.1 116 86.2
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.0e-47 193.4 116 81.9
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.7e-47 192.6 114 80.7
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 2.2e-47 192.2 96 94.8
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 2.2e-47 192.2 116 82.8
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 8.5e-47 190.3 116 83.6
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 5.5e-46 187.6 116 81.9
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 1.2e-45 186.4 105 86.7
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 2.1e-45 185.7 116 82.8
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 3.6e-45 184.9 117 76.1
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 3.6e-45 184.9 116 79.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 6.1e-45 184.1 116 79.3
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.1e-45 184.1 116 79.3
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.1e-45 184.1 116 79.3
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 6.1e-45 184.1 116 79.3
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 7.9e-45 183.7 106 86.8
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.0e-44 183.3 116 77.6
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.3e-44 182.2 116 77.6
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 3.0e-44 181.8 116 78.4
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 3.0e-44 181.8 119 79.8
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 6.7e-44 180.6 120 73.3
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 8.8e-44 180.3 116 77.6
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 8.8e-44 180.3 116 77.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.1e-43 179.9 117 78.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.5e-43 179.5 118 77.1
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.5e-43 178.7 124 77.4
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.5e-43 178.7 124 77.4
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 3.3e-43 178.3 103 82.5
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 4.3e-43 177.9 118 76.3
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 5.7e-43 177.6 116 76.7
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 5.7e-43 177.6 94 87.2
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 5.7e-43 177.6 116 78.4
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 9.7e-43 176.8 96 88.5
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 9.7e-43 176.8 106 81.1
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 9.7e-43 176.8 117 78.6
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 9.7e-43 176.8 117 77.8
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.7e-42 176.0 97 83.5
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.2e-42 175.6 117 73.5
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.2e-42 175.6 117 76.9
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 3.7e-42 174.9 97 86.6
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 4.8e-42 174.5 96 87.5
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 8.2e-42 173.7 117 76.1
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.1e-41 173.3 118 75.4
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.1e-41 173.3 118 75.4
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.1e-41 173.3 95 87.4
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.4e-41 172.9 116 74.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.8e-41 172.6 99 81.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 2.4e-41 172.2 96 85.4
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 5.3e-41 171.0 99 81.8
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 5.3e-41 171.0 96 88.5
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 6.9e-41 170.6 94 81.9
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 6.9e-41 170.6 95 84.2
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 9.1e-41 170.2 117 70.9
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 9.1e-41 170.2 118 76.3
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.2e-40 169.9 117 70.9
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 7.7e-40 167.2 95 80.0
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 7.7e-40 167.2 105 75.2
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.0e-39 166.8 118 70.3
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 1.3e-39 166.4 130 66.2
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 101 77.2
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.2e-39 165.6 95 78.9
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 2.9e-39 165.2 95 81.1
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 8.5e-39 163.7 97 80.4
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.1e-38 163.3 102 75.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.4e-38 162.9 127 65.4
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.9e-38 162.5 104 76.0
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.9e-38 162.5 125 68.8
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 4.2e-38 161.4 101 74.3
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 4.2e-38 161.4 105 72.4
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 5.5e-38 161.0 98 76.5
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 7.2e-38 160.6 117 72.6
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 2.1e-37 159.1 118 68.6
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 2.1e-37 159.1 98 74.5
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 1.0e-36 156.8 99 74.7
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 1.0e-36 156.8 108 69.4
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-36 156.4 91 82.4
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 2.3e-36 155.6 108 68.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 2.3e-36 155.6 108 68.5
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 2.3e-36 155.6 108 68.5
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 2.3e-36 155.6 108 68.5
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 4.4e-35 151.4 99 72.7
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 5.7e-35 151.0 109 65.1
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 4.8e-34 147.9 80 86.2
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.4e-33 146.4 100 71.0
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.4e-28 129.8 95 61.1
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.5e-27 126.3 92 57.6
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 2.6e-27 125.6 85 70.6
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 5.7e-27 124.4 97 63.9
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 2.2e-26 122.5 100 56.0
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 2.8e-26 122.1 92 69.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 3.7e-26 121.7 95 65.3
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.0e-24 115.9 100 52.0
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.3e-23 113.2 81 71.6
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 8.0e-21 104.0 59 83.1
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.2e-15 85.9 77 48.1
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 2.6e-11 72.4 91 35.2
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 4.5e-08 61.6 57 52.6
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 7.7e-08 60.8 34 70.6


User provided reference genes

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