Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 1.5e-239 832.4 423 100.0
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 4.7e-103 379.0 413 51.3
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.5e-24 118.2 347 30.0
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.6e-23 114.8 330 30.3
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 9.0e-22 109.0 278 32.0
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.5e-21 108.2 358 27.4
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.0e-20 103.2 273 30.8
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-19 100.9 296 28.0
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-16 92.0 255 30.6
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 7.4e-16 89.4 274 25.9
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.7e-16 89.0 299 27.4
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-15 88.6 312 26.6
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 3.7e-15 87.0 278 29.1
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 1.8e-14 84.7 297 26.9
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 3.1e-14 84.0 265 28.7
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 2.6e-13 80.9 247 27.1
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 5.9e-13 79.7 254 27.6
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 2.2e-12 77.8 314 26.4
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 2.9e-12 77.4 210 27.6
QL11p055992 Quercus lobata HOM05D013052 ORTHO05D012831 2.9e-12 77.4 247 26.7
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.8e-12 77.0 242 25.6
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 6.5e-12 76.3 264 25.8
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 6.5e-12 76.3 264 25.8
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.5e-12 76.3 253 22.5
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 8.5e-12 75.9 252 24.6
Rhsim03G0011900 Rhododendron simsii HOM05D018081 ORTHO05D010877 8.5e-12 75.9 257 27.6
Rhsim12G0158900 Rhododendron simsii HOM05D000374 ORTHO05D000238 8.5e-12 75.9 298 23.8
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 1.4e-11 75.1 271 25.1
Rhsim10G0137100 Rhododendron simsii HOM05D000374 ORTHO05D013046 1.9e-11 74.7 251 27.9
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.5e-11 74.3 226 28.3
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 5.5e-11 73.2 243 30.0
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 5.5e-11 73.2 269 26.0
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 5.5e-11 73.2 248 27.0
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.2e-10 72.0 269 24.5
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-10 72.0 281 26.7
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.2e-10 72.0 206 26.7
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 1.6e-10 71.6 211 31.3
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 3.6e-10 70.5 250 26.4
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 3.6e-10 70.5 250 26.4
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 4.7e-10 70.1 192 29.2
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.7e-10 70.1 279 26.5
QL11p003079 Quercus lobata HOM05D010066 ORTHO05D010877 1.0e-09 68.9 284 24.3
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.0e-09 68.9 277 21.7
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-09 68.6 264 28.4
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 1.8e-09 68.2 213 25.4
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 3.0e-09 67.4 235 26.0
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 3.0e-09 67.4 286 26.2
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 5.1e-09 66.6 335 26.6
COL.COLO4_00289 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.1e-08 65.5 193 28.0
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-08 65.5 106 36.8
TWI38G0385 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 1.1e-08 65.5 226 25.7
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.5e-08 65.1 243 26.3
COL.COLO4_11012 Corchorus olitorius HOM05D000249 ORTHO05D000206 2.0e-08 64.7 254 26.0
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.0e-08 64.7 310 24.5
Manes.13G149600 Manihot esculenta HOM05D007183 ORTHO05D008829 3.3e-08 63.9 225 26.7
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 5.7e-08 63.2 203 28.1
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.7e-08 62.4 258 26.0
Gohir.D11G057000 Gossypium hirsutum HOM05D000249 ORTHO05D000206 9.7e-08 62.4 245 24.9
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-07 62.0 258 25.6
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 1.3e-07 62.0 139 34.5
C03p37710 Brassica napus HOM05D000249 ORTHO05D000206 2.2e-07 61.2 136 30.9
BolC3t16060H Brassica oleracea HOM05D000249 ORTHO05D000206 2.2e-07 61.2 136 30.9
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 2.2e-07 61.2 247 25.9
Gorai.007G062200 Gossypium raimondii HOM05D000249 ORTHO05D000206 2.2e-07 61.2 245 24.9
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 4.8e-07 60.1 298 24.8
CSS0022832 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 6.3e-07 59.7 162 29.6
COL.COLO4_30776 Corchorus olitorius HOM05D014846 ORTHO05D016249 8.2e-07 59.3 110 35.5
Hund00506 Selenicereus undatus HOM05D064078 ORTHO05D012831 8.2e-07 59.3 291 24.1
Thecc.01G112800 Theobroma cacao HOM05D000249 ORTHO05D000206 8.2e-07 59.3 278 27.0
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 1.1e-06 58.9 192 27.1
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-06 58.5 206 27.7
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 1.8e-06 58.2 219 24.7
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.4e-06 57.8 147 32.7
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 2.4e-06 57.8 251 25.5
Aqoxy7G03143 Aquilegia oxysepala HOM05D008418 ORTHO05D011146 3.1e-06 57.4 274 22.6
AL6G46340 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.1e-06 57.4 135 28.9
CANSAT35G0251 Cannabis sativa HOM05D007183 ORTHO05D008829 3.1e-06 57.4 216 26.4
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.1e-06 57.4 191 25.7
COL.COLO4_15708 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.1e-06 57.4 136 30.9
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 5.3e-06 56.6 338 21.9
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.3e-06 56.6 250 22.4
BraA05t21401Z Brassica rapa HOM05D000249 ORTHO05D000206 7.0e-06 56.2 177 25.4
Migut.N01004 Erythranthe guttata HOM05D003569 ORTHO05D004178 9.1e-06 55.8 112 36.6


User provided reference genes

Program Settings