Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 1.7e-64 249.2 131 100.0
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 1.7e-56 222.6 131 87.8
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 3.0e-56 221.9 131 87.0
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 3.3e-55 218.4 131 84.7
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 9.9e-52 206.8 133 81.2
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 6.4e-51 204.1 132 78.8
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 1.9e-50 202.6 132 78.8
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 3.2e-50 201.8 133 78.2
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 2.1e-49 199.1 133 78.9
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 2.1e-49 199.1 131 77.9
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 2.1e-49 199.1 132 80.3
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 2.7e-49 198.7 131 76.3
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 1.0e-48 196.8 131 77.9
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.3e-48 196.4 131 77.9
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.3e-48 196.4 133 76.7
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.7e-48 196.1 131 76.3
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.7e-48 196.1 131 75.6
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 3.9e-48 194.9 131 74.0
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 5.1e-48 194.5 131 77.9
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 5.1e-48 194.5 132 76.5
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 5.1e-48 194.5 132 76.5
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 6.6e-48 194.1 133 76.7
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 1.9e-47 192.6 131 77.1
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.9e-47 192.6 131 74.8
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 3.3e-47 191.8 133 78.9
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 3.3e-47 191.8 131 74.0
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 4.3e-47 191.4 131 74.8
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 5.6e-47 191.0 133 73.7
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 5.6e-47 191.0 131 74.0
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 7.3e-47 190.7 131 74.8
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 9.6e-47 190.3 132 75.0
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 9.6e-47 190.3 133 76.7
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 9.6e-47 190.3 133 75.2
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 9.6e-47 190.3 127 78.0
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 3.6e-46 188.3 133 77.4
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 4.7e-46 188.0 126 76.2
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.7e-46 188.0 131 73.3
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 8.1e-46 187.2 133 73.7
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 8.1e-46 187.2 133 75.9
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 1.1e-45 186.8 133 76.7
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 1.4e-45 186.4 133 77.4
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.8e-45 186.0 127 74.8
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 2.4e-45 185.7 131 71.0
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 2.4e-45 185.7 133 72.2
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 3.1e-45 185.3 131 72.5
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 4.0e-45 184.9 132 74.2
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 6.8e-45 184.1 132 75.0
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 6.8e-45 184.1 131 77.1
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.2e-44 183.3 133 71.4
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.5e-44 183.0 131 69.5
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 1.5e-44 183.0 128 74.2
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 2.0e-44 182.6 133 72.2
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.4e-44 181.8 133 75.2
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.8e-44 181.0 134 74.6
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.8e-44 181.0 134 74.6
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 5.8e-44 181.0 131 72.5
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 5.8e-44 181.0 131 72.5
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 7.6e-44 180.6 131 74.0
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 74.6
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 74.6
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 74.6
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.6e-44 180.6 134 74.6
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.7e-43 179.5 134 73.9
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.7e-43 179.5 133 73.7
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.7e-43 179.5 132 67.4
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 2.2e-43 179.1 134 76.9
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.2e-43 179.1 134 76.9
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.9e-43 178.7 133 71.4
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 3.8e-43 178.3 133 72.9
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 4.9e-43 177.9 102 90.2
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.4e-43 177.6 134 73.1
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.4e-43 177.6 104 86.5
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 6.4e-43 177.6 131 71.8
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 8.4e-43 177.2 131 67.9
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.4e-43 177.2 134 72.4
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 1.1e-42 176.8 132 73.5
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 1.9e-42 176.0 132 70.5
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.2e-42 175.3 134 72.4
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 3.2e-42 175.3 132 70.5
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 5.4e-42 174.5 132 68.9
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 7.1e-42 174.1 131 67.2
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 7.1e-42 174.1 131 67.2
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 2.1e-41 172.6 134 70.9
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 2.7e-41 172.2 131 68.7
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 4.6e-41 171.4 114 77.2
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 1.0e-40 170.2 131 67.2
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.0e-40 170.2 111 79.3
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.7e-40 169.5 132 65.2
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 3.0e-40 168.7 122 71.3
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 3.9e-40 168.3 132 65.2
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 1.1e-39 166.8 136 66.9
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.9e-39 166.0 132 64.4
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 3.3e-39 165.2 133 66.2
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 9.6e-39 163.7 131 69.5
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 9.6e-39 163.7 127 66.1
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.3e-38 163.3 131 67.2
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.6e-38 162.9 132 64.4
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 2.8e-38 162.2 132 66.7
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 2.8e-38 162.2 112 74.1
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 6.2e-38 161.0 130 66.2
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 1.1e-37 160.2 120 70.8
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.4e-37 159.1 126 65.1
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 3.1e-37 158.7 132 65.9
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.3e-37 157.9 119 68.9
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 1.2e-36 156.8 112 74.1
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 1.2e-36 156.8 112 74.1
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 1.2e-36 156.8 112 74.1
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 1.2e-36 156.8 112 74.1
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 1.5e-36 156.4 131 61.1
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.4e-36 154.8 91 83.5
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 1.3e-35 153.3 132 64.4
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.2e-35 152.5 131 63.4
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 4.9e-35 151.4 133 62.4
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 4.9e-35 151.4 91 81.3
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 8.4e-35 150.6 132 61.4
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 4.2e-34 148.3 91 79.1
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 3.5e-33 145.2 97 77.3
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 7.9e-33 144.1 132 56.8
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.3e-32 143.3 114 66.7
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.3e-32 142.5 123 65.9
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 2.3e-32 142.5 108 64.8
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 3.9e-32 141.7 99 71.7
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 5.1e-32 141.4 132 59.8
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 2.1e-30 136.0 93 75.3
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 9.0e-29 130.6 120 65.0
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 4.9e-27 124.8 119 56.3
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.7e-24 114.4 92 67.4
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 6.9e-21 104.4 56 87.5
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 2.0e-20 102.8 90 56.7
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 1.0e-19 100.5 124 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 4.2e-18 95.1 89 51.7
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 1.6e-17 93.2 105 46.7
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 1.3e-16 90.1 102 49.0
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.5e-15 86.7 52 76.9
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 7.6e-12 74.3 69 62.3
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 2.2e-11 72.8 92 47.8
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.4e-10 70.1 118 35.6
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 9.3e-10 67.4 98 39.8
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 7.9e-09 64.3 80 53.8
Dinv25304 Davidia involucrata HOM05D000009 ORTHO05D000008 8.2e-06 54.3 54 59.3


User provided reference genes

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